RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 HBP1O60381 514 aa8.45□□□□□ -1.06
VAPB-205ENST00000476395 GUCY1B2O75343 617 aa8.45□□□□□ -1.06
VAPB-205ENST00000476395 S100BP04271 92 aaPredicted RBP8.45□□□□□ -1.06
VAPB-205ENST00000476395 ZNF286BP0CG31 522 aa8.45□□□□□ -1.06
VAPB-205ENST00000476395 RALBP11234 206 aa8.45□□□□□ -1.06
VAPB-205ENST00000476395 ZNF12P17014 697 aa8.45□□□□□ -1.06
VAPB-205ENST00000476395 TPTEP56180 551 aa8.45□□□□□ -1.06
VAPB-205ENST00000476395 RBP5P82980 135 aa8.45□□□□□ -1.06
VAPB-205ENST00000476395 FPGSQ05932 587 aa8.45□□□□□ -1.06
VAPB-205ENST00000476395 PAFAH1B3Q15102 231 aaKnown RBP8.45□□□□□ -1.06
VAPB-205ENST00000476395 CTU1Q7Z7A3 348 aaKnown RBP8.45□□□□□ -1.06
VAPB-205ENST00000476395 PIGZQ86VD9 579 aa8.45□□□□□ -1.06
VAPB-205ENST00000476395 OSTM1Q86WC4 334 aa8.45□□□□□ -1.06
VAPB-205ENST00000476395 MFSD3Q96ES6 412 aa8.45□□□□□ -1.06
VAPB-205ENST00000476395 ZNF597Q96LX8 424 aa8.45□□□□□ -1.06
VAPB-205ENST00000476395 APBA2Q99767 749 aa8.45□□□□□ -1.06
VAPB-205ENST00000476395 MARCH7Q9H992 704 aa8.45□□□□□ -1.06
VAPB-205ENST00000476395 CLK4Q9HAZ1 481 aaKnown RBP8.45□□□□□ -1.06
VAPB-205ENST00000476395 SPC25Q9HBM1 224 aa8.45□□□□□ -1.06
VAPB-205ENST00000476395 WDR6Q9NNW5 1121 aaKnown RBP8.45□□□□□ -1.06
VAPB-205ENST00000476395 PIGVQ9NUD9 493 aa8.45□□□□□ -1.06
VAPB-205ENST00000476395 SMOXQ9NWM0 555 aa8.45□□□□□ -1.06
VAPB-205ENST00000476395 ADA2Q9NZK5 511 aa8.45□□□□□ -1.06
VAPB-205ENST00000476395 DCDC2Q9UHG0 476 aa8.45□□□□□ -1.06
VAPB-205ENST00000476395 ERGIC3Q9Y282 383 aa8.45□□□□□ -1.06
VAPB-205ENST00000476395 TRIP12Q14669 1992 aaPredicted RBP8.45□□□□□ -1.06
VAPB-205ENST00000476395 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.44□□□□□ -1.06
VAPB-205ENST00000476395 TBKBP1A7MCY6 615 aa8.44□□□□□ -1.06
VAPB-205ENST00000476395 FAM47E-STBD1D6RA91 191 aa8.44□□□□□ -1.06
VAPB-205ENST00000476395 GOLGA8TH3BQL2 631 aa8.44□□□□□ -1.06
VAPB-205ENST00000476395 PIRO00625 290 aa8.44□□□□□ -1.06
VAPB-205ENST00000476395 DLGAP1O14490 977 aa8.44□□□□□ -1.06
VAPB-205ENST00000476395 CPA3P15088 417 aa8.44□□□□□ -1.06
VAPB-205ENST00000476395 MPSTP25325 297 aa8.44□□□□□ -1.06
VAPB-205ENST00000476395 PTPN3P26045 913 aa8.44□□□□□ -1.06
VAPB-205ENST00000476395 LIMK2P53671 638 aa8.44□□□□□ -1.06
VAPB-205ENST00000476395 IFITM2Q01629 132 aa8.44□□□□□ -1.06
VAPB-205ENST00000476395 CLCQ05315 142 aa8.44□□□□□ -1.06
VAPB-205ENST00000476395 MAPK11Q15759 364 aa8.44□□□□□ -1.06
VAPB-205ENST00000476395 ZBED5Q49AG3 693 aa8.44□□□□□ -1.06
VAPB-205ENST00000476395 C4orf22Q6V702 233 aa8.44□□□□□ -1.06
VAPB-205ENST00000476395 USP43Q70EL4 1123 aa8.44□□□□□ -1.06
VAPB-205ENST00000476395 LRRC49Q8IUZ0 686 aa8.44□□□□□ -1.06
VAPB-205ENST00000476395 CENPLQ8N0S6 344 aaPredicted RBP8.44□□□□□ -1.06
VAPB-205ENST00000476395 CRYBG2Q8N1P7 616 aa8.44□□□□□ -1.06
VAPB-205ENST00000476395 PCYOX1LQ8NBM8 494 aa8.44□□□□□ -1.06
VAPB-205ENST00000476395 PPP1R13LQ8WUF5 828 aa8.44□□□□□ -1.06
VAPB-205ENST00000476395 SPACA7Q96KW9 195 aa8.44□□□□□ -1.06
VAPB-205ENST00000476395 NPY6RQ99463 290 aa8.44□□□□□ -1.06
VAPB-205ENST00000476395 IL12RB2Q99665 862 aa8.44□□□□□ -1.06
VAPB-205ENST00000476395 RTKNQ9BST9 563 aa8.44□□□□□ -1.06
VAPB-205ENST00000476395 MTG1Q9BT17 334 aaPredicted RBP8.44□□□□□ -1.06
VAPB-205ENST00000476395 GATA5Q9BWX5 397 aaPredicted RBP8.44□□□□□ -1.06
VAPB-205ENST00000476395 SMARCAD1Q9H4L7 1026 aa8.44□□□□□ -1.06
VAPB-205ENST00000476395 WDR41Q9HAD4 459 aa8.44□□□□□ -1.06
VAPB-205ENST00000476395 GIN1Q9NXP7 522 aa8.44□□□□□ -1.06
VAPB-205ENST00000476395 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.44□□□□□ -1.06
VAPB-205ENST00000476395 ANKRD34BA5PLL1 514 aa8.44□□□□□ -1.06
VAPB-205ENST00000476395 GPR32O75388 356 aa8.44□□□□□ -1.06
VAPB-205ENST00000476395 ARNTP27540 789 aa8.44□□□□□ -1.06
VAPB-205ENST00000476395 SCNN1AP37088 669 aa8.44□□□□□ -1.06
VAPB-205ENST00000476395 OPRL1P41146 370 aa8.44□□□□□ -1.06
VAPB-205ENST00000476395 ACADVLP49748 655 aa8.44□□□□□ -1.06
VAPB-205ENST00000476395 GALNT2Q10471 571 aa8.44□□□□□ -1.06
VAPB-205ENST00000476395 SELENBP1Q13228 472 aa8.44□□□□□ -1.06
VAPB-205ENST00000476395 SEPT6Q14141 434 aa8.44□□□□□ -1.06
VAPB-205ENST00000476395 SPIDRQ14159 915 aa8.44□□□□□ -1.06
VAPB-205ENST00000476395 FRG1Q14331 258 aaKnown RBP8.44□□□□□ -1.06
VAPB-205ENST00000476395 C9orf57Q5W0N0 161 aa8.44□□□□□ -1.06
VAPB-205ENST00000476395 HEATR6Q6AI08 1181 aaKnown RBP8.44□□□□□ -1.06
VAPB-205ENST00000476395 LAYNQ6UX15 382 aa8.44□□□□□ -1.06
VAPB-205ENST00000476395 CYHR1Q6ZMK1 362 aa8.44□□□□□ -1.06
VAPB-205ENST00000476395 CPSF7Q8N684 471 aaKnown RBP8.44□□□□□ -1.06
VAPB-205ENST00000476395 KYQ8NBH2 561 aa8.44□□□□□ -1.06
VAPB-205ENST00000476395 BPIFB6Q8NFQ5 453 aa8.44□□□□□ -1.06
VAPB-205ENST00000476395 CAPSLQ8WWF8 208 aa8.44□□□□□ -1.06
VAPB-205ENST00000476395 PPWD1Q96BP3 646 aaKnown RBP8.44□□□□□ -1.06
VAPB-205ENST00000476395 KIF12Q96FN5 646 aa8.44□□□□□ -1.06
VAPB-205ENST00000476395 MAELQ96JY0 434 aaKnown RBP8.44□□□□□ -1.06
VAPB-205ENST00000476395 UNKQ9C0B0 810 aaKnown RBP8.44□□□□□ -1.06
VAPB-205ENST00000476395 PRDM12Q9H4Q4 367 aa8.44□□□□□ -1.06
VAPB-205ENST00000476395 CASS4Q9NQ75 786 aa8.44□□□□□ -1.06
VAPB-205ENST00000476395 PNPLA3Q9NST1 481 aa8.44□□□□□ -1.06
VAPB-205ENST00000476395 OXSMQ9NWU1 459 aa8.44□□□□□ -1.06
VAPB-205ENST00000476395 SNTG2Q9NY99 539 aa8.44□□□□□ -1.06
VAPB-205ENST00000476395 RNF181Q9P0P0 153 aa8.44□□□□□ -1.06
VAPB-205ENST00000476395 ZDHHC2Q9UIJ5 367 aa8.44□□□□□ -1.06
VAPB-205ENST00000476395 TK2O00142 265 aa8.43□□□□□ -1.06
VAPB-205ENST00000476395 VAPBO95292 243 aa8.43□□□□□ -1.06
VAPB-205ENST00000476395 LCP1P13796 627 aa8.43□□□□□ -1.06
VAPB-205ENST00000476395 RPL17P18621 184 aaKnown RBP8.43□□□□□ -1.06
VAPB-205ENST00000476395 MX2P20592 715 aa8.43□□□□□ -1.06
VAPB-205ENST00000476395 ADAM17P78536 824 aa8.43□□□□□ -1.06
VAPB-205ENST00000476395 PLCL1Q15111 1095 aa8.43□□□□□ -1.06
VAPB-205ENST00000476395 INAVAQ3KP66 663 aa8.43□□□□□ -1.06
VAPB-205ENST00000476395 GLRA4Q5JXX5 417 aa8.43□□□□□ -1.06
VAPB-205ENST00000476395 LGSNQ5TDP6 509 aa8.43□□□□□ -1.06
VAPB-205ENST00000476395 STRADAQ7RTN6 431 aa8.43□□□□□ -1.06
VAPB-205ENST00000476395 APOBEC3FQ8IUX4 373 aaKnown RBP8.43□□□□□ -1.06
VAPB-205ENST00000476395 ANKRD52Q8NB46 1076 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms