RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 MMP13P45452 471 aa21.31■■□□□ 1
LIME1-204ENST00000476183 LIG3P49916 1009 aa21.31■■□□□ 1
LIME1-204ENST00000476183 SLC10A2Q12908 348 aaPredicted RBP21.31■■□□□ 1
LIME1-204ENST00000476183 RALGDSQ12967 914 aa21.31■■□□□ 1
LIME1-204ENST00000476183 MARC1Q5VT66 337 aa21.31■■□□□ 1
LIME1-204ENST00000476183 ERAP2Q6P179 960 aa21.31■■□□□ 1
LIME1-204ENST00000476183 DCP2Q8IU60 420 aaKnown RBP21.31■■□□□ 1
LIME1-204ENST00000476183 CNDP2Q96KP4 475 aaKnown RBP21.31■■□□□ 1
LIME1-204ENST00000476183 RNF157Q96PX1 679 aa21.31■■□□□ 1
LIME1-204ENST00000476183 TMEM121BQ9BXQ6 578 aaPredicted RBP21.31■■□□□ 1
LIME1-204ENST00000476183 SCUBE2Q9NQ36 999 aa21.31■■□□□ 1
LIME1-204ENST00000476183 KLF15Q9UIH9 416 aa21.31■■□□□ 1
LIME1-204ENST00000476183 NEUROG3Q9Y4Z2 214 aa21.31■■□□□ 1
LIME1-204ENST00000476183 GOLGA4Q13439 2230 aaKnown RBP21.31■■□□□ 1
LIME1-204ENST00000476183 PTPRBP23467 1997 aa21.3■■□□□ 1
LIME1-204ENST00000476183 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP21.3■■□□□ 1
LIME1-204ENST00000476183 HTRA2O43464 458 aaPredicted RBP21.3■■□□□ 1
LIME1-204ENST00000476183 LDOC1O95751 146 aaPredicted RBP21.3■■□□□ 1
LIME1-204ENST00000476183 DNAJC3Q13217 504 aa21.3■■□□□ 1
LIME1-204ENST00000476183 PDE1CQ14123 709 aaPredicted RBP21.3■■□□□ 1
LIME1-204ENST00000476183 IRF4Q15306 451 aa21.3■■□□□ 1
LIME1-204ENST00000476183 WSCD2Q2TBF2 565 aa21.3■■□□□ 1
LIME1-204ENST00000476183 BBS5Q8N3I7 341 aa21.3■■□□□ 1
LIME1-204ENST00000476183 NSMCE1Q8WV22 266 aa21.3■■□□□ 1
LIME1-204ENST00000476183 MAML1Q92585 1016 aa21.3■■□□□ 1
LIME1-204ENST00000476183 IFT43Q96FT9 208 aa21.3■■□□□ 1
LIME1-204ENST00000476183 NT5MQ9NPB1 228 aa21.3■■□□□ 1
LIME1-204ENST00000476183 DTLQ9NZJ0 730 aa21.3■■□□□ 1
LIME1-204ENST00000476183 PLXNB3Q9ULL4 1909 aa21.29■■□□□ 1
LIME1-204ENST00000476183 FAM221BA6H8Z2 402 aa21.29■■□□□ 1
LIME1-204ENST00000476183 TRIM38O00635 465 aa21.29■■□□□ 1
LIME1-204ENST00000476183 ENC1O14682 589 aa21.29■■□□□ 1
LIME1-204ENST00000476183 PIAS2O75928 621 aa21.29■■□□□ 1
LIME1-204ENST00000476183 COMTP21964 271 aa21.29■■□□□ 1
LIME1-204ENST00000476183 TRAF2Q12933 501 aa21.29■■□□□ 1
LIME1-204ENST00000476183 LRRC38Q5VT99 294 aa21.29■■□□□ 1
LIME1-204ENST00000476183 CCDC170Q8IYT3 715 aa21.29■■□□□ 1
LIME1-204ENST00000476183 PLD5Q8N7P1 536 aa21.29■■□□□ 1
LIME1-204ENST00000476183 SPOCK2Q92563 424 aa21.29■■□□□ 1
LIME1-204ENST00000476183 TSGA13Q96PP4 275 aa21.29■■□□□ 1
LIME1-204ENST00000476183 PANX2Q96RD6 677 aa21.29■■□□□ 1
LIME1-204ENST00000476183 C1QTNF7Q9BXJ2 289 aa21.29■■□□□ 1
LIME1-204ENST00000476183 DNAJC28Q9NX36 388 aa21.29■■□□□ 1
LIME1-204ENST00000476183 PNMA8BQ9ULN7 279 aaPredicted RBP21.29■■□□□ 1
LIME1-204ENST00000476183 MSRB2Q9Y3D2 182 aa21.29■■□□□ 1
LIME1-204ENST00000476183 PCDHA13Q9Y5I0 950 aa21.29■■□□□ 1
LIME1-204ENST00000476183 SOWAHDA6NJG2 315 aa21.28■■□□□ 1
LIME1-204ENST00000476183 C1QTNF9BB2RNN3 333 aa21.28■■□□□ 1
LIME1-204ENST00000476183 MATN3O15232 486 aa21.28■■□□□ 1
LIME1-204ENST00000476183 SOCS5O75159 536 aa21.28■■□□□ 1
LIME1-204ENST00000476183 C1QTNF9P0C862 333 aa21.28■■□□□ 1
LIME1-204ENST00000476183 GIMD1P0DJR0 217 aa21.28■■□□□ 1
LIME1-204ENST00000476183 TNNT1P13805 278 aa21.28■■□□□ 1
LIME1-204ENST00000476183 GM2AP17900 193 aa21.28■■□□□ 1
LIME1-204ENST00000476183 FECHP22830 423 aa21.28■■□□□ 1
LIME1-204ENST00000476183 CCNCP24863 283 aa21.28■■□□□ 1
LIME1-204ENST00000476183 SLC1A1P43005 524 aa21.28■■□□□ 1
LIME1-204ENST00000476183 HADHBP55084 474 aaKnown RBP21.28■■□□□ 1
LIME1-204ENST00000476183 POLR2LP62875 67 aaKnown RBP21.28■■□□□ 1
LIME1-204ENST00000476183 EIF2B5Q13144 721 aaKnown RBP21.28■■□□□ 1
LIME1-204ENST00000476183 IHHQ14623 411 aa21.28■■□□□ 1
LIME1-204ENST00000476183 LRRC14Q15048 493 aa21.28■■□□□ 1
LIME1-204ENST00000476183 IFI16Q16666 785 aaKnown RBP21.28■■□□□ 1
LIME1-204ENST00000476183 CCDC157Q569K6 752 aa21.28■■□□□ 1
LIME1-204ENST00000476183 LIPIQ6XZB0 460 aa21.28■■□□□ 1
LIME1-204ENST00000476183 DPPA4Q7L190 304 aa21.28■■□□□ 1
LIME1-204ENST00000476183 PARGQ86W56 976 aa21.28■■□□□ 1
LIME1-204ENST00000476183 PAF1Q8N7H5 531 aa21.28■■□□□ 1
LIME1-204ENST00000476183 GATA6Q92908 595 aa21.28■■□□□ 1
LIME1-204ENST00000476183 GOLPH3Q9H4A6 298 aa21.28■■□□□ 1
LIME1-204ENST00000476183 A8MX80 341 aa21.27■■□□□ 1
LIME1-204ENST00000476183 ZNF487B1APH4 448 aa21.27■■□□□ 1
LIME1-204ENST00000476183 LZTS3O60299 673 aaPredicted RBP21.27■■□□□ 1
LIME1-204ENST00000476183 CSF2P04141 144 aa21.27■■□□□ 1
LIME1-204ENST00000476183 KRT1P04264 644 aa21.27■■□□□ 1
LIME1-204ENST00000476183 NME1P15531 152 aaKnown RBP21.27■■□□□ 1
LIME1-204ENST00000476183 NOP2P46087 812 aaKnown RBP21.27■■□□□ 1
LIME1-204ENST00000476183 AGERQ15109 404 aa21.27■■□□□ 1
LIME1-204ENST00000476183 RALGPS1Q5JS13 557 aa21.27■■□□□ 1
LIME1-204ENST00000476183 SLC9A4Q6AI14 798 aa21.27■■□□□ 1
LIME1-204ENST00000476183 TIGD7Q6NT04 549 aaPredicted RBP21.27■■□□□ 1
LIME1-204ENST00000476183 VSIG1Q86XK7 387 aa21.27■■□□□ 1
LIME1-204ENST00000476183 RHOT1Q8IXI2 618 aa21.27■■□□□ 1
LIME1-204ENST00000476183 PDCD6IPQ8WUM4 868 aaKnown RBP21.27■■□□□ 1
LIME1-204ENST00000476183 FATE1Q969F0 183 aa21.27■■□□□ 1
LIME1-204ENST00000476183 RNF25Q96BH1 459 aaPredicted RBP21.27■■□□□ 1
LIME1-204ENST00000476183 SEMA3CQ99985 751 aa21.27■■□□□ 1
LIME1-204ENST00000476183 B4GALT6Q9UBX8 382 aa21.27■■□□□ 1
LIME1-204ENST00000476183 CFAP69A5D8W1 941 aa21.26■□□□□ 0.99
LIME1-204ENST00000476183 FFAR2O15552 330 aa21.26■□□□□ 0.99
LIME1-204ENST00000476183 SIGLEC6O43699 453 aa21.26■□□□□ 0.99
LIME1-204ENST00000476183 MX2P20592 715 aa21.26■□□□□ 0.99
LIME1-204ENST00000476183 CYLC1P35663 651 aaPredicted RBP21.26■□□□□ 0.99
LIME1-204ENST00000476183 ACADVLP49748 655 aa21.26■□□□□ 0.99
LIME1-204ENST00000476183 YPEL5P62699 121 aa21.26■□□□□ 0.99
LIME1-204ENST00000476183 PTPRRQ15256 657 aa21.26■□□□□ 0.99
LIME1-204ENST00000476183 PROX2Q3B8N5 592 aa21.26■□□□□ 0.99
LIME1-204ENST00000476183 ALG1LQ6GMV1 187 aa21.26■□□□□ 0.99
LIME1-204ENST00000476183 UNQ6494/PRO21346Q6UXR6 183 aa21.26■□□□□ 0.99
LIME1-204ENST00000476183 HDAC11Q96DB2 347 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms