RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 ADAMDEC1O15204 470 aa4.32□□□□□ -1.72
VPS13D-207ENST00000476169 ZBTB14O43829 449 aa4.32□□□□□ -1.72
VPS13D-207ENST00000476169 KINO60870 393 aaKnown RBP4.32□□□□□ -1.72
VPS13D-207ENST00000476169 SLC22A3O75751 556 aa4.32□□□□□ -1.72
VPS13D-207ENST00000476169 NKX2-2O95096 273 aa4.32□□□□□ -1.72
VPS13D-207ENST00000476169 GUCA1CO95843 209 aa4.32□□□□□ -1.72
VPS13D-207ENST00000476169 HMOX1P09601 288 aa4.32□□□□□ -1.72
VPS13D-207ENST00000476169 ALDOCP09972 364 aaKnown RBP4.32□□□□□ -1.72
VPS13D-207ENST00000476169 SUPT20HL2P0C7V6 817 aa4.32□□□□□ -1.72
VPS13D-207ENST00000476169 PCP11498 1178 aaKnown RBP4.32□□□□□ -1.72
VPS13D-207ENST00000476169 APEHP13798 732 aaKnown RBP4.32□□□□□ -1.72
VPS13D-207ENST00000476169 PON1P27169 355 aa4.32□□□□□ -1.72
VPS13D-207ENST00000476169 NDUFS1P28331 727 aa4.32□□□□□ -1.72
VPS13D-207ENST00000476169 MTHFRP42898 656 aa4.32□□□□□ -1.72
VPS13D-207ENST00000476169 SLC37A1P57057 533 aa4.32□□□□□ -1.72
VPS13D-207ENST00000476169 CYP4A11Q02928 519 aa4.32□□□□□ -1.72
VPS13D-207ENST00000476169 CFHR3Q02985 330 aa4.32□□□□□ -1.72
VPS13D-207ENST00000476169 ACSM2AQ08AH3 577 aa4.32□□□□□ -1.72
VPS13D-207ENST00000476169 RALGDSQ12967 914 aa4.32□□□□□ -1.72
VPS13D-207ENST00000476169 GAB1Q13480 694 aa4.32□□□□□ -1.72
VPS13D-207ENST00000476169 MORF4L2Q15014 288 aa4.32□□□□□ -1.72
VPS13D-207ENST00000476169 COL28A1Q2UY09 1125 aa4.32□□□□□ -1.72
VPS13D-207ENST00000476169 SUPT20HL1Q3ZLR7 823 aa4.32□□□□□ -1.72
VPS13D-207ENST00000476169 CRY2Q49AN0 593 aa4.32□□□□□ -1.72
VPS13D-207ENST00000476169 AARS2Q5JTZ9 985 aaKnown RBP4.32□□□□□ -1.72
VPS13D-207ENST00000476169 COLEC12Q5KU26 742 aa4.32□□□□□ -1.72
VPS13D-207ENST00000476169 CC2D1BQ5T0F9 858 aaKnown RBP4.32□□□□□ -1.72
VPS13D-207ENST00000476169 ACSM2BQ68CK6 577 aa4.32□□□□□ -1.72
VPS13D-207ENST00000476169 C17orf99Q6UX52 265 aa4.32□□□□□ -1.72
VPS13D-207ENST00000476169 UNC5DQ6UXZ4 953 aa4.32□□□□□ -1.72
VPS13D-207ENST00000476169 NAPRTQ6XQN6 538 aa4.32□□□□□ -1.72
VPS13D-207ENST00000476169 CLEC17AQ6ZS10 378 aa4.32□□□□□ -1.72
VPS13D-207ENST00000476169 ERN2Q76MJ5 926 aaKnown RBP4.32□□□□□ -1.72
VPS13D-207ENST00000476169 MCM10Q7L590 875 aa4.32□□□□□ -1.72
VPS13D-207ENST00000476169 IQCHQ86VS3 1027 aa4.32□□□□□ -1.72
VPS13D-207ENST00000476169 TMEM200AQ86VY9 491 aa4.32□□□□□ -1.72
VPS13D-207ENST00000476169 TDRPQ86YL5 185 aa4.32□□□□□ -1.72
VPS13D-207ENST00000476169 LAS2Q8IYD9 372 aa4.32□□□□□ -1.72
VPS13D-207ENST00000476169 DPP10Q8N608 796 aa4.32□□□□□ -1.72
VPS13D-207ENST00000476169 SETD9Q8NE22 299 aa4.32□□□□□ -1.72
VPS13D-207ENST00000476169 ANKRD20A12PQ8NF67 263 aa4.32□□□□□ -1.72
VPS13D-207ENST00000476169 LILRB1Q8NHL6 650 aaPredicted RBP4.32□□□□□ -1.72
VPS13D-207ENST00000476169 GDPD5Q8WTR4 605 aa4.32□□□□□ -1.72
VPS13D-207ENST00000476169 TEKT4Q8WW24 435 aa4.32□□□□□ -1.72
VPS13D-207ENST00000476169 MR1Q95460 341 aa4.32□□□□□ -1.72
VPS13D-207ENST00000476169 CAVIN3Q969G5 261 aa4.32□□□□□ -1.72
VPS13D-207ENST00000476169 ZNF622Q969S3 477 aaKnown RBP eCLIP4.32□□□□□ -1.722e-9■□□□□ 9.3
VPS13D-207ENST00000476169 BBS4Q96RK4 519 aa4.32□□□□□ -1.72
VPS13D-207ENST00000476169 CADM1Q9BY67 442 aaKnown RBP4.32□□□□□ -1.72
VPS13D-207ENST00000476169 SFXN1Q9H9B4 322 aa4.32□□□□□ -1.72
VPS13D-207ENST00000476169 CYP4F11Q9HBI6 524 aa4.32□□□□□ -1.72
VPS13D-207ENST00000476169 RANGRFQ9HD47 186 aaPredicted RBP4.32□□□□□ -1.72
VPS13D-207ENST00000476169 ARL15Q9NXU5 204 aa4.32□□□□□ -1.72
VPS13D-207ENST00000476169 PSD3Q9NYI0 1048 aa4.32□□□□□ -1.72
VPS13D-207ENST00000476169 TFCP2L1Q9NZI6 479 aa4.32□□□□□ -1.72
VPS13D-207ENST00000476169 CNOT8Q9UFF9 292 aaKnown RBP4.32□□□□□ -1.72
VPS13D-207ENST00000476169 HOOK1Q9UJC3 728 aaKnown RBP4.32□□□□□ -1.72
VPS13D-207ENST00000476169 OSGIN1Q9UJX0 560 aa4.32□□□□□ -1.72
VPS13D-207ENST00000476169 BLOC1S6Q9UL45 172 aa4.32□□□□□ -1.72
VPS13D-207ENST00000476169 BTBD3Q9Y2F9 522 aa4.32□□□□□ -1.72
VPS13D-207ENST00000476169 AAR2Q9Y312 384 aaKnown RBP4.32□□□□□ -1.72
VPS13D-207ENST00000476169 AOX1Q06278 1338 aa4.31□□□□□ -1.72
VPS13D-207ENST00000476169 A0A1W2PRV1 198 aa4.31□□□□□ -1.72
VPS13D-207ENST00000476169 LRRD1A4D1F6 860 aa4.31□□□□□ -1.72
VPS13D-207ENST00000476169 OR6C76A6NM76 312 aa4.31□□□□□ -1.72
VPS13D-207ENST00000476169 H3BQ06 376 aaPredicted RBP4.31□□□□□ -1.72
VPS13D-207ENST00000476169 IFNL4K9M1U5 179 aa4.31□□□□□ -1.72
VPS13D-207ENST00000476169 SCAMP1O15126 338 aa4.31□□□□□ -1.72
VPS13D-207ENST00000476169 MITFO75030 526 aaPredicted RBP4.31□□□□□ -1.72
VPS13D-207ENST00000476169 USP12O75317 370 aa4.31□□□□□ -1.72
VPS13D-207ENST00000476169 RECQL5O94762 991 aaPredicted RBP4.31□□□□□ -1.72
VPS13D-207ENST00000476169 SLCO2B1O94956 709 aa4.31□□□□□ -1.72
VPS13D-207ENST00000476169 PNPP00491 289 aa4.31□□□□□ -1.72
VPS13D-207ENST00000476169 ADAP00813 363 aa4.31□□□□□ -1.72
VPS13D-207ENST00000476169 IL1AP01583 271 aa4.31□□□□□ -1.72
VPS13D-207ENST00000476169 SLC2A4P14672 509 aa4.31□□□□□ -1.72
VPS13D-207ENST00000476169 TYK2P29597 1187 aa4.31□□□□□ -1.72
VPS13D-207ENST00000476169 STAT6P42226 847 aa4.31□□□□□ -1.72
VPS13D-207ENST00000476169 SKIV2L2P42285 1042 aaKnown RBP4.31□□□□□ -1.72
VPS13D-207ENST00000476169 AVPR1BP47901 424 aa4.31□□□□□ -1.72
VPS13D-207ENST00000476169 VPS41P49754 854 aa4.31□□□□□ -1.72
VPS13D-207ENST00000476169 RAB28P51157 221 aa4.31□□□□□ -1.72
VPS13D-207ENST00000476169 CCR3P51677 355 aa4.31□□□□□ -1.72
VPS13D-207ENST00000476169 CTSWP56202 376 aa4.31□□□□□ -1.72
VPS13D-207ENST00000476169 YWHAZP63104 245 aaKnown RBP4.31□□□□□ -1.72
VPS13D-207ENST00000476169 RPA4Q13156 261 aa4.31□□□□□ -1.72
VPS13D-207ENST00000476169 SLC14A1Q13336 389 aa4.31□□□□□ -1.72
VPS13D-207ENST00000476169 FOXE3Q13461 319 aa4.31□□□□□ -1.72
VPS13D-207ENST00000476169 GRAPQ13588 217 aa4.31□□□□□ -1.72
VPS13D-207ENST00000476169 SEMA3AQ14563 771 aa4.31□□□□□ -1.72
VPS13D-207ENST00000476169 MFSD13AQ14CX5 517 aa4.31□□□□□ -1.72
VPS13D-207ENST00000476169 NAB2Q15742 525 aa4.31□□□□□ -1.72
VPS13D-207ENST00000476169 LSM12Q3MHD2 195 aaKnown RBP4.31□□□□□ -1.72
VPS13D-207ENST00000476169 ARL13AQ5H913 290 aaPredicted RBP4.31□□□□□ -1.72
VPS13D-207ENST00000476169 GLRA4Q5JXX5 417 aa4.31□□□□□ -1.72
VPS13D-207ENST00000476169 C6orf163Q5TEZ5 329 aa4.31□□□□□ -1.72
VPS13D-207ENST00000476169 KRT39Q6A163 491 aa4.31□□□□□ -1.72
VPS13D-207ENST00000476169 JADE1Q6IE81 842 aa4.31□□□□□ -1.72
VPS13D-207ENST00000476169 GALNT17Q6IS24 598 aa4.31□□□□□ -1.72
VPS13D-207ENST00000476169 PPP1R21Q6ZMI0 780 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms