RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 PIF1Q9H611 641 aa11.58□□□□□ -0.56
U2AF1-209ENST00000475639 UGT1A7Q9HAW7 530 aa11.58□□□□□ -0.56
U2AF1-209ENST00000475639 UGT1A10Q9HAW8 530 aa11.58□□□□□ -0.56
U2AF1-209ENST00000475639 UGT1A8Q9HAW9 530 aa11.58□□□□□ -0.56
U2AF1-209ENST00000475639 GIN1Q9NXP7 522 aa11.58□□□□□ -0.56
U2AF1-209ENST00000475639 CDC14AQ9UNH5 594 aa11.58□□□□□ -0.56
U2AF1-209ENST00000475639 MRASO14807 208 aa11.58□□□□□ -0.56
U2AF1-209ENST00000475639 TBX3O15119 743 aa11.58□□□□□ -0.56
U2AF1-209ENST00000475639 PRODHO43272 600 aa11.58□□□□□ -0.56
U2AF1-209ENST00000475639 AQP9O43315 295 aa11.58□□□□□ -0.56
U2AF1-209ENST00000475639 GRIN3BO60391 1043 aa11.58□□□□□ -0.56
U2AF1-209ENST00000475639 SIN3BO75182 1162 aa11.58□□□□□ -0.56
U2AF1-209ENST00000475639 SNNO75324 88 aaPredicted RBP11.58□□□□□ -0.56
U2AF1-209ENST00000475639 KATNA1O75449 491 aa11.58□□□□□ -0.56
U2AF1-209ENST00000475639 SNX4O95219 450 aa11.58□□□□□ -0.56
U2AF1-209ENST00000475639 ATE1O95260 518 aa11.58□□□□□ -0.56
U2AF1-209ENST00000475639 H6PDO95479 791 aa11.58□□□□□ -0.56
U2AF1-209ENST00000475639 ATP5BP06576 529 aaKnown RBP11.58□□□□□ -0.56
U2AF1-209ENST00000475639 CYP11B1P15538 503 aa11.58□□□□□ -0.56
U2AF1-209ENST00000475639 GABRB3P28472 473 aa11.58□□□□□ -0.56
U2AF1-209ENST00000475639 CCR4P51679 360 aa11.58□□□□□ -0.56
U2AF1-209ENST00000475639 CSHL1Q14406 222 aa11.58□□□□□ -0.56
U2AF1-209ENST00000475639 ZMYND11Q15326 602 aa11.58□□□□□ -0.56
U2AF1-209ENST00000475639 EGFLAMQ63HQ2 1017 aa11.58□□□□□ -0.56
U2AF1-209ENST00000475639 CLCC1Q96S66 551 aa11.58□□□□□ -0.56
U2AF1-209ENST00000475639 STOML2Q9UJZ1 356 aa11.58□□□□□ -0.56
U2AF1-209ENST00000475639 CDH7Q9ULB5 785 aa11.58□□□□□ -0.56
U2AF1-209ENST00000475639 ZNF335Q9H4Z2 1342 aaPredicted RBP11.58□□□□□ -0.56
U2AF1-209ENST00000475639 COL18A1P39060 1754 aa11.58□□□□□ -0.56
U2AF1-209ENST00000475639 FAM92AA1XBS5 289 aa11.58□□□□□ -0.56
U2AF1-209ENST00000475639 SEC24AO95486 1093 aa11.58□□□□□ -0.56
U2AF1-209ENST00000475639 PRKAA2P54646 552 aa11.58□□□□□ -0.56
U2AF1-209ENST00000475639 MRPS5P82675 430 aaKnown RBP11.58□□□□□ -0.56
U2AF1-209ENST00000475639 ACAD10Q6JQN1 1059 aa11.58□□□□□ -0.56
U2AF1-209ENST00000475639 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.58□□□□□ -0.56
U2AF1-209ENST00000475639 HPDLQ96IR7 371 aa11.58□□□□□ -0.56
U2AF1-209ENST00000475639 CAB39LQ9H9S4 337 aa11.58□□□□□ -0.56
U2AF1-209ENST00000475639 UBP1Q9NZI7 540 aa11.58□□□□□ -0.56
U2AF1-209ENST00000475639 SCN7AQ01118 1682 aa11.58□□□□□ -0.56
U2AF1-209ENST00000475639 KAT6AQ92794 2004 aa11.58□□□□□ -0.56
U2AF1-209ENST00000475639 TEX46H3BTG2 121 aa11.57□□□□□ -0.56
U2AF1-209ENST00000475639 J3QRK9 145 aa11.57□□□□□ -0.56
U2AF1-209ENST00000475639 PPP1R11O60927 126 aaPredicted RBP11.57□□□□□ -0.56
U2AF1-209ENST00000475639 SEMA3DO95025 777 aa11.57□□□□□ -0.56
U2AF1-209ENST00000475639 CD247P20963 164 aa11.57□□□□□ -0.56
U2AF1-209ENST00000475639 CDH15P55291 814 aa11.57□□□□□ -0.56
U2AF1-209ENST00000475639 PDK2Q15119 407 aa11.57□□□□□ -0.56
U2AF1-209ENST00000475639 FAM117BQ6P1L5 589 aa11.57□□□□□ -0.56
U2AF1-209ENST00000475639 ZCCHC23Q6ZST2 131 aa11.57□□□□□ -0.56
U2AF1-209ENST00000475639 ADHFE1Q8IWW8 467 aa11.57□□□□□ -0.56
U2AF1-209ENST00000475639 ADGRF4Q8IZF3 695 aa11.57□□□□□ -0.56
U2AF1-209ENST00000475639 CCDC185Q8N715 623 aa11.57□□□□□ -0.56
U2AF1-209ENST00000475639 KBTBD8Q8NFY9 601 aa11.57□□□□□ -0.56
U2AF1-209ENST00000475639 METTL6Q8TCB7 284 aa11.57□□□□□ -0.56
U2AF1-209ENST00000475639 TMEM159Q96B96 161 aa11.57□□□□□ -0.56
U2AF1-209ENST00000475639 FBXL8Q96CD0 374 aa11.57□□□□□ -0.56
U2AF1-209ENST00000475639 FAM84BQ96KN1 310 aaPredicted RBP11.57□□□□□ -0.56
U2AF1-209ENST00000475639 ZCCHC2Q9C0B9 1178 aaKnown RBP11.57□□□□□ -0.56
U2AF1-209ENST00000475639 SLC26A4O43511 780 aa11.57□□□□□ -0.56
U2AF1-209ENST00000475639 CALCAP01258 141 aa11.57□□□□□ -0.56
U2AF1-209ENST00000475639 HLA-DQA2P01906 255 aa11.57□□□□□ -0.56
U2AF1-209ENST00000475639 APOC1P02654 83 aa11.57□□□□□ -0.56
U2AF1-209ENST00000475639 PRG2P13727 222 aa11.57□□□□□ -0.56
U2AF1-209ENST00000475639 AVPR1AP37288 418 aa11.57□□□□□ -0.56
U2AF1-209ENST00000475639 PTP4A2Q12974 167 aa11.57□□□□□ -0.56
U2AF1-209ENST00000475639 KCNJ8Q15842 424 aa11.57□□□□□ -0.56
U2AF1-209ENST00000475639 EPC2Q52LR7 807 aa11.57□□□□□ -0.56
U2AF1-209ENST00000475639 GLRA4Q5JXX5 417 aa11.57□□□□□ -0.56
U2AF1-209ENST00000475639 UBA3Q8TBC4 463 aa11.57□□□□□ -0.56
U2AF1-209ENST00000475639 USP7Q93009 1102 aa11.57□□□□□ -0.56
U2AF1-209ENST00000475639 BHMTQ93088 406 aa11.57□□□□□ -0.56
U2AF1-209ENST00000475639 ZNF778Q96MU6 729 aa11.57□□□□□ -0.56
U2AF1-209ENST00000475639 SLC25A23Q9BV35 468 aa11.57□□□□□ -0.56
U2AF1-209ENST00000475639 PLLPQ9Y342 182 aa11.57□□□□□ -0.56
U2AF1-209ENST00000475639 KBTBD13C9JR72 458 aa11.57□□□□□ -0.56
U2AF1-209ENST00000475639 PGRMC2O15173 223 aa11.57□□□□□ -0.56
U2AF1-209ENST00000475639 RBMXL2O75526 392 aaKnown RBP11.57□□□□□ -0.56
U2AF1-209ENST00000475639 HIST1H2ABP04908 130 aa11.57□□□□□ -0.56
U2AF1-209ENST00000475639 MYL4P12829 197 aa11.57□□□□□ -0.56
U2AF1-209ENST00000475639 ADRA2BP18089 450 aa11.57□□□□□ -0.56
U2AF1-209ENST00000475639 ZNF10P21506 573 aaPredicted RBP11.57□□□□□ -0.56
U2AF1-209ENST00000475639 RPA1P27694 616 aa11.57□□□□□ -0.56
U2AF1-209ENST00000475639 L1CAMP32004 1257 aa11.57□□□□□ -0.56
U2AF1-209ENST00000475639 ACSM2AQ08AH3 577 aa11.57□□□□□ -0.56
U2AF1-209ENST00000475639 ATF7IP2Q5U623 682 aa11.57□□□□□ -0.56
U2AF1-209ENST00000475639 ACSM2BQ68CK6 577 aa11.57□□□□□ -0.56
U2AF1-209ENST00000475639 HIST3H2AQ7L7L0 130 aa11.57□□□□□ -0.56
U2AF1-209ENST00000475639 MIB1Q86YT6 1006 aa11.57□□□□□ -0.56
U2AF1-209ENST00000475639 MCOLN3Q8TDD5 553 aa11.57□□□□□ -0.56
U2AF1-209ENST00000475639 HIST1H2ACQ93077 130 aa11.57□□□□□ -0.56
U2AF1-209ENST00000475639 PKP2Q99959 881 aa11.57□□□□□ -0.56
U2AF1-209ENST00000475639 DGCR6LQ9BY27 220 aa11.57□□□□□ -0.56
U2AF1-209ENST00000475639 PRDM8Q9NQV8 689 aa11.57□□□□□ -0.56
U2AF1-209ENST00000475639 ABI2Q9NYB9 513 aaPredicted RBP11.57□□□□□ -0.56
U2AF1-209ENST00000475639 PTGFRNQ9P2B2 879 aa11.57□□□□□ -0.56
U2AF1-209ENST00000475639 WBP11Q9Y2W2 641 aaKnown RBP11.57□□□□□ -0.56
U2AF1-209ENST00000475639 CORINQ9Y5Q5 1042 aa11.57□□□□□ -0.56
U2AF1-209ENST00000475639 TOGARAM1Q9Y4F4 1720 aa11.57□□□□□ -0.56
U2AF1-209ENST00000475639 H3BNH8 94 aa11.57□□□□□ -0.56
U2AF1-209ENST00000475639 JCHAINP01591 159 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms