RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 ARRDC3Q96B67 414 aa15.83■□□□□ 0.12
CPSF3-203ENST00000475482 FERMT1Q9BQL6 677 aa15.83■□□□□ 0.12
CPSF3-203ENST00000475482 HERPUD2Q9BSE4 406 aa15.83■□□□□ 0.12
CPSF3-203ENST00000475482 HDAC8Q9BY41 377 aa15.83■□□□□ 0.12
CPSF3-203ENST00000475482 PREBQ9HCU5 417 aa15.83■□□□□ 0.12
CPSF3-203ENST00000475482 CWC15Q9P013 229 aaKnown RBP15.83■□□□□ 0.12
CPSF3-203ENST00000475482 RAB21Q9UL25 225 aa15.83■□□□□ 0.12
CPSF3-203ENST00000475482 ZNF148Q9UQR1 794 aa15.83■□□□□ 0.12
CPSF3-203ENST00000475482 DMTF1Q9Y222 760 aa15.83■□□□□ 0.12
CPSF3-203ENST00000475482 KNTC1P50748 2209 aa15.83■□□□□ 0.12
CPSF3-203ENST00000475482 IGF2RP11717 2491 aa15.83■□□□□ 0.12
CPSF3-203ENST00000475482 AKAP13Q12802 2813 aa15.82■□□□□ 0.12
CPSF3-203ENST00000475482 A0A1B0GTQ1 180 aa15.82■□□□□ 0.12
CPSF3-203ENST00000475482 CCDC151A5D8V7 595 aa15.82■□□□□ 0.12
CPSF3-203ENST00000475482 FGF10O15520 208 aaPredicted RBP15.82■□□□□ 0.12
CPSF3-203ENST00000475482 FLRT2O43155 660 aa15.82■□□□□ 0.12
CPSF3-203ENST00000475482 BNIP3LO60238 219 aa15.82■□□□□ 0.12
CPSF3-203ENST00000475482 DKK1O94907 266 aa15.82■□□□□ 0.12
CPSF3-203ENST00000475482 TRIM16O95361 564 aa15.82■□□□□ 0.12
CPSF3-203ENST00000475482 ITGAVP06756 1048 aa15.82■□□□□ 0.12
CPSF3-203ENST00000475482 IL4RP24394 825 aa15.82■□□□□ 0.12
CPSF3-203ENST00000475482 TNFRSF8P28908 595 aa15.82■□□□□ 0.12
CPSF3-203ENST00000475482 SERPINB6P35237 376 aa15.82■□□□□ 0.12
CPSF3-203ENST00000475482 OTUD4Q01804 1114 aaKnown RBP15.82■□□□□ 0.12
CPSF3-203ENST00000475482 GUCY2DQ02846 1103 aa15.82■□□□□ 0.12
CPSF3-203ENST00000475482 FOXC1Q12948 553 aa15.82■□□□□ 0.12
CPSF3-203ENST00000475482 SNX1Q13596 522 aa15.82■□□□□ 0.12
CPSF3-203ENST00000475482 CUL1Q13616 776 aa15.82■□□□□ 0.12
CPSF3-203ENST00000475482 CARD16Q5EG05 197 aa15.82■□□□□ 0.12
CPSF3-203ENST00000475482 NAPEPLDQ6IQ20 393 aa15.82■□□□□ 0.12
CPSF3-203ENST00000475482 RFX8Q6ZV50 586 aa15.82■□□□□ 0.12
CPSF3-203ENST00000475482 PRPF39Q86UA1 669 aaKnown RBP15.82■□□□□ 0.12
CPSF3-203ENST00000475482 PLD5Q8N7P1 536 aa15.82■□□□□ 0.12
CPSF3-203ENST00000475482 PCDH19Q8TAB3 1148 aa15.82■□□□□ 0.12
CPSF3-203ENST00000475482 ACTL9Q8TC94 416 aa15.82■□□□□ 0.12
CPSF3-203ENST00000475482 TNKS2Q9H2K2 1166 aa15.82■□□□□ 0.12
CPSF3-203ENST00000475482 CATSPERBQ9H7T0 1116 aa15.82■□□□□ 0.12
CPSF3-203ENST00000475482 FAM114A2Q9NRY5 505 aa15.82■□□□□ 0.12
CPSF3-203ENST00000475482 IL36AQ9UHA7 158 aa15.82■□□□□ 0.12
CPSF3-203ENST00000475482 ACTL7AQ9Y615 435 aa15.82■□□□□ 0.12
CPSF3-203ENST00000475482 COL5A1P20908 1838 aaPredicted RBP15.82■□□□□ 0.12
CPSF3-203ENST00000475482 PTPRBP23467 1997 aa15.82■□□□□ 0.12
CPSF3-203ENST00000475482 CFAP69A5D8W1 941 aa15.81■□□□□ 0.12
CPSF3-203ENST00000475482 TTI1O43156 1089 aa15.81■□□□□ 0.12
CPSF3-203ENST00000475482 KDELR3O43731 214 aa15.81■□□□□ 0.12
CPSF3-203ENST00000475482 RAMP2O60895 175 aa15.81■□□□□ 0.12
CPSF3-203ENST00000475482 LEFTY1O75610 366 aa15.81■□□□□ 0.12
CPSF3-203ENST00000475482 STIP1P31948 543 aaKnown RBP15.81■□□□□ 0.12
CPSF3-203ENST00000475482 CCT8P50990 548 aa15.81■□□□□ 0.12
CPSF3-203ENST00000475482 DRG2P55039 364 aaKnown RBP15.81■□□□□ 0.12
CPSF3-203ENST00000475482 GEMIN4P57678 1058 aaKnown RBP15.81■□□□□ 0.12
CPSF3-203ENST00000475482 YBEYP58557 167 aaPredicted RBP15.81■□□□□ 0.12
CPSF3-203ENST00000475482 EIF3EP60228 445 aaKnown RBP15.81■□□□□ 0.12
CPSF3-203ENST00000475482 CCDC15Q0P6D6 951 aa15.81■□□□□ 0.12
CPSF3-203ENST00000475482 OVGP1Q12889 678 aa15.81■□□□□ 0.12
CPSF3-203ENST00000475482 XRCC4Q13426 336 aa15.81■□□□□ 0.12
CPSF3-203ENST00000475482 SUZ12Q15022 739 aaKnown RBP15.81■□□□□ 0.12
CPSF3-203ENST00000475482 NOMO1Q15155 1222 aa15.81■□□□□ 0.12
CPSF3-203ENST00000475482 SHBQ15464 509 aa15.81■□□□□ 0.12
CPSF3-203ENST00000475482 POM121L1PQ3SYA9 428 aa15.81■□□□□ 0.12
CPSF3-203ENST00000475482 ARSIQ5FYB1 569 aa15.81■□□□□ 0.12
CPSF3-203ENST00000475482 TTC27Q6P3X3 843 aa15.81■□□□□ 0.12
CPSF3-203ENST00000475482 TMCO3Q6UWJ1 677 aa15.81■□□□□ 0.12
CPSF3-203ENST00000475482 ERN2Q76MJ5 926 aaKnown RBP15.81■□□□□ 0.12
CPSF3-203ENST00000475482 RAB44Q7Z6P3 723 aaPredicted RBP15.81■□□□□ 0.12
CPSF3-203ENST00000475482 IQCHQ86VS3 1027 aa15.81■□□□□ 0.12
CPSF3-203ENST00000475482 JAMLQ86YT9 394 aa15.81■□□□□ 0.12
CPSF3-203ENST00000475482 CCDC89Q8N998 374 aa15.81■□□□□ 0.12
CPSF3-203ENST00000475482 MFSD2AQ8NA29 543 aa15.81■□□□□ 0.12
CPSF3-203ENST00000475482 TMEM145Q8NBT3 493 aa15.81■□□□□ 0.12
CPSF3-203ENST00000475482 SLC35B2Q8TB61 432 aa15.81■□□□□ 0.12
CPSF3-203ENST00000475482 ATG4AQ8WYN0 398 aa15.81■□□□□ 0.12
CPSF3-203ENST00000475482 SKA1Q96BD8 255 aa15.81■□□□□ 0.12
CPSF3-203ENST00000475482 SERAC1Q96JX3 654 aa15.81■□□□□ 0.12
CPSF3-203ENST00000475482 ELF4Q99607 663 aaPredicted RBP15.81■□□□□ 0.12
CPSF3-203ENST00000475482 HEPHQ9BQS7 1158 aa15.81■□□□□ 0.12
CPSF3-203ENST00000475482 ERP44Q9BS26 406 aa15.81■□□□□ 0.12
CPSF3-203ENST00000475482 SCNM1Q9BWG6 230 aa15.81■□□□□ 0.12
CPSF3-203ENST00000475482 FAM129AQ9BZQ8 928 aa15.81■□□□□ 0.12
CPSF3-203ENST00000475482 ERVMER34-1Q9H9K5 563 aa15.81■□□□□ 0.12
CPSF3-203ENST00000475482 EPB41L5Q9HCM4 733 aa15.81■□□□□ 0.12
CPSF3-203ENST00000475482 TOR4AQ9NXH8 423 aa15.81■□□□□ 0.12
CPSF3-203ENST00000475482 PLXNB3Q9ULL4 1909 aa15.81■□□□□ 0.12
CPSF3-203ENST00000475482 R3HDM2Q9Y2K5 976 aaKnown RBP15.81■□□□□ 0.12
CPSF3-203ENST00000475482 FCF1Q9Y324 198 aaKnown RBP15.81■□□□□ 0.12
CPSF3-203ENST00000475482 ASPMQ8IZT6 3477 aa15.8■□□□□ 0.12
CPSF3-203ENST00000475482 HACD1B0YJ81 288 aa15.8■□□□□ 0.12
CPSF3-203ENST00000475482 TLR4O00206 839 aa15.8■□□□□ 0.12
CPSF3-203ENST00000475482 KPNA3O00505 521 aaPredicted RBP15.8■□□□□ 0.12
CPSF3-203ENST00000475482 RNGTTO60942 597 aaKnown RBP15.8■□□□□ 0.12
CPSF3-203ENST00000475482 ITGB7P26010 798 aa15.8■□□□□ 0.12
CPSF3-203ENST00000475482 EPHB2P29323 1055 aa15.8■□□□□ 0.12
CPSF3-203ENST00000475482 RECQLP46063 649 aaPredicted RBP15.8■□□□□ 0.12
CPSF3-203ENST00000475482 CCNHP51946 323 aaPredicted RBP15.8■□□□□ 0.12
CPSF3-203ENST00000475482 C21orf59P57076 290 aa15.8■□□□□ 0.12
CPSF3-203ENST00000475482 NXPH1P58417 271 aa15.8■□□□□ 0.12
CPSF3-203ENST00000475482 SLC7A5Q01650 507 aa15.8■□□□□ 0.12
CPSF3-203ENST00000475482 ADCY2Q08462 1091 aa15.8■□□□□ 0.12
CPSF3-203ENST00000475482 DPYSQ14117 519 aa15.8■□□□□ 0.12
CPSF3-203ENST00000475482 POLD3Q15054 466 aaPredicted RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms