RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 DUSP23Q9BVJ7 150 aa6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 BOCQ9BWV1 1114 aa6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 NARFLQ9H6Q4 476 aa6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 PRDM5Q9NQX1 630 aaPredicted RBP6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 C1orf112Q9NSG2 853 aa6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 C20orf96Q9NUD7 363 aaPredicted RBP6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 CCM2LQ9NUG4 571 aaPredicted RBP6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 PARVAQ9NVD7 372 aa6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 INTS13Q9NVM9 706 aa6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 TLK1Q9UKI8 766 aa6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 SMG5Q9UPR3 1016 aaKnown RBP6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 EIF3LQ9Y262 564 aaKnown RBP6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 RAXQ9Y2V3 346 aa6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 PRELID3BQ9Y3B1 194 aa6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 NOC2LQ9Y3T9 749 aaKnown RBP6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 HYOU1Q9Y4L1 999 aa6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 TRPV2Q9Y5S1 764 aa6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 MARF1Q9Y4F3 1742 aaKnown RBP6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 SLIT2O94813 1529 aa6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 GRID2IPA4D2P6 1211 aa6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 C2orf74A8MZ97 194 aa6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 F8W036 122 aa6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 L7N2F9 121 aa6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 KCNK3O14649 394 aa6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 PCDH17O14917 1159 aa6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 MSI1O43347 362 aaKnown RBP6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 KRT36O76013 467 aa6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 CIAO1O76071 339 aa6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 A1BGP04217 495 aa6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 KRT1P04264 644 aa6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 SHBGP04278 402 aa6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 NTRK1P04629 796 aa6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 KRT8P05787 483 aa6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 RB1P06400 928 aa6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 INHBBP09529 407 aa6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 POLR2MP0CAP2 368 aa6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 ZBTB48P10074 688 aaPredicted RBP6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 MYL4P12829 197 aa6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 STMN1P16949 149 aa6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 HOXB8P17481 243 aaPredicted RBP6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 KRT15P19012 456 aa6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 PAMP19021 973 aa6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 MARCKSP29966 332 aaPredicted RBP6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 BMP8BP34820 402 aa6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 BMPR1AP36894 532 aa6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 ARHGDIAP52565 204 aa6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 HK2P52789 917 aa6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 SLC5A3P53794 718 aa6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 PSMD4P55036 377 aaKnown RBP6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 GALK2Q01415 458 aa6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 SMAD4Q13485 552 aaKnown RBP6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 SPARCL1Q14515 664 aa6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 FASTKD3Q14CZ7 662 aaKnown RBP6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 RRS1Q15050 365 aaKnown RBP6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 PDCD1Q15116 288 aa6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 TRADDQ15628 312 aa6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 CYP2A13Q16696 494 aa6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 LRIT3Q3SXY7 679 aa6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 SPATS1Q496A3 300 aa6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 GTDC1Q4AE62 458 aa6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 SFRP5Q5T4F7 317 aa6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 BEND3Q5T5X7 828 aa6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 FAM109BQ6ICB4 259 aaPredicted RBP6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 NANOGP8Q6NSW7 305 aa6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 ALKBH5Q6P6C2 394 aaKnown RBP6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 CNSTQ6PJW8 725 aa6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 SEZ6L2Q6UXD5 910 aa6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 ZYG11AQ6WRX3 759 aa6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 STXBP4Q6ZWJ1 553 aa6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 ASPGQ86U10 573 aa6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 SLC9B2Q86UD5 537 aa6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 COL23A1Q86Y22 540 aaPredicted RBP6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 RHPN2Q8IUC4 686 aa6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 WDR49Q8IV35 697 aa6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 RCOR2Q8IZ40 523 aa6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 CARFQ8N187 725 aa6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 ZNF655Q8N720 491 aaPredicted RBP6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 ANKRD42Q8N9B4 389 aa6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 ICA1LQ8NDH6 482 aa6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 SRFBP1Q8NEF9 429 aaKnown RBP6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 IFI44Q8TCB0 444 aa6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 KRT35Q92764 455 aa6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 GJA10Q969M2 543 aa6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 MARC2Q969Z3 335 aa6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 ZUFSPQ96AP4 578 aa6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 PDXPQ96GD0 296 aa6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 FAM89AQ96GI7 184 aa6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 TCTN2Q96GX1 697 aa6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 HEXIM2Q96MH2 286 aaKnown RBP6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 WRNIP1Q96S55 665 aa6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 RMDN3Q96TC7 470 aa6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 MMP19Q99542 508 aa6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 ELF4Q99607 663 aaPredicted RBP6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 NTPCRQ9BSD7 190 aaKnown RBP6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 TTYH3Q9C0H2 523 aa6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 ISCUQ9H1K1 167 aa6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 XKR8Q9H6D3 395 aa6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 DHX33Q9H6R0 707 aaKnown RBP6.04□□□□□ -1.44
ECHDC1-215ENST00000475319 SMURF1Q9HCE7 757 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms