RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 HCAR2Q8TDS4 363 aa9.51□□□□□ -0.89
PDPN-204ENST00000475043 NSMCE1Q8WV22 266 aa9.51□□□□□ -0.89
PDPN-204ENST00000475043 TEKT4Q8WW24 435 aa9.51□□□□□ -0.89
PDPN-204ENST00000475043 ASB12Q8WXK4 309 aa9.51□□□□□ -0.89
PDPN-204ENST00000475043 CSPG4P5Q96PW8 444 aa9.51□□□□□ -0.89
PDPN-204ENST00000475043 TUBGCP5Q96RT8 1024 aa9.51□□□□□ -0.89
PDPN-204ENST00000475043 PCDH12Q9NPG4 1184 aa9.51□□□□□ -0.89
PDPN-204ENST00000475043 ETNK2Q9NVF9 386 aa9.51□□□□□ -0.89
PDPN-204ENST00000475043 COQ6Q9Y2Z9 468 aa9.51□□□□□ -0.89
PDPN-204ENST00000475043 PCDHGA1Q9Y5H4 931 aa9.51□□□□□ -0.89
PDPN-204ENST00000475043 FRYQ5TBA9 3013 aa9.5□□□□□ -0.89
PDPN-204ENST00000475043 TTC24A2A3L6 582 aaPredicted RBP9.5□□□□□ -0.89
PDPN-204ENST00000475043 AKR1B10O60218 316 aa9.5□□□□□ -0.89
PDPN-204ENST00000475043 LZTS3O60299 673 aaPredicted RBP9.5□□□□□ -0.89
PDPN-204ENST00000475043 NEBLO76041 1014 aa9.5□□□□□ -0.89
PDPN-204ENST00000475043 C1SP09871 688 aa9.5□□□□□ -0.89
PDPN-204ENST00000475043 H2AFZP0C0S5 128 aa9.5□□□□□ -0.89
PDPN-204ENST00000475043 ALPPL2P10696 532 aa9.5□□□□□ -0.89
PDPN-204ENST00000475043 CDK4P11802 303 aa9.5□□□□□ -0.89
PDPN-204ENST00000475043 C6P13671 934 aa9.5□□□□□ -0.89
PDPN-204ENST00000475043 JUNDP17535 347 aa9.5□□□□□ -0.89
PDPN-204ENST00000475043 HNRNPH3P31942 346 aaKnown RBP9.5□□□□□ -0.89
PDPN-204ENST00000475043 HNF1BP35680 557 aa9.5□□□□□ -0.89
PDPN-204ENST00000475043 IGFALSP35858 605 aa9.5□□□□□ -0.89
PDPN-204ENST00000475043 CSNK1DP48730 415 aa9.5□□□□□ -0.89
PDPN-204ENST00000475043 ACADVLP49748 655 aa9.5□□□□□ -0.89
PDPN-204ENST00000475043 LIG3P49916 1009 aa9.5□□□□□ -0.89
PDPN-204ENST00000475043 RENBPP51606 427 aa9.5□□□□□ -0.89
PDPN-204ENST00000475043 SUOXP51687 545 aa9.5□□□□□ -0.89
PDPN-204ENST00000475043 CLDN6P56747 220 aa9.5□□□□□ -0.89
PDPN-204ENST00000475043 PFN3P60673 137 aa9.5□□□□□ -0.89
PDPN-204ENST00000475043 HNRNPKP61978 463 aaKnown RBP eCLIP9.5□□□□□ -0.89
PDPN-204ENST00000475043 NSUN2Q08J23 767 aaKnown RBP eCLIP9.5□□□□□ -0.89
PDPN-204ENST00000475043 PTK2BQ14289 1009 aa9.5□□□□□ -0.89
PDPN-204ENST00000475043 LRRC14Q15048 493 aa9.5□□□□□ -0.89
PDPN-204ENST00000475043 SMAD1Q15797 465 aaKnown RBP9.5□□□□□ -0.89
PDPN-204ENST00000475043 SLC18A3Q16572 532 aa9.5□□□□□ -0.89
PDPN-204ENST00000475043 TMEM52BQ4KMG9 183 aa9.5□□□□□ -0.89
PDPN-204ENST00000475043 TMCO4Q5TGY1 634 aa9.5□□□□□ -0.89
PDPN-204ENST00000475043 H2AFVQ71UI9 128 aa9.5□□□□□ -0.89
PDPN-204ENST00000475043 BBS5Q8N3I7 341 aa9.5□□□□□ -0.89
PDPN-204ENST00000475043 ATPAF2Q8N5M1 289 aa9.5□□□□□ -0.89
PDPN-204ENST00000475043 OR4C6Q8NH72 309 aa9.5□□□□□ -0.89
PDPN-204ENST00000475043 MDM1Q8TC05 714 aa9.5□□□□□ -0.89
PDPN-204ENST00000475043 PDCD6IPQ8WUM4 868 aaKnown RBP9.5□□□□□ -0.89
PDPN-204ENST00000475043 CENPTQ96BT3 561 aa9.5□□□□□ -0.89
PDPN-204ENST00000475043 IFT43Q96FT9 208 aa9.5□□□□□ -0.89
PDPN-204ENST00000475043 ZNF599Q96NL3 588 aa9.5□□□□□ -0.89
PDPN-204ENST00000475043 PACSIN1Q9BY11 444 aa9.5□□□□□ -0.89
PDPN-204ENST00000475043 CCDC86Q9H6F5 360 aaKnown RBP9.5□□□□□ -0.89
PDPN-204ENST00000475043 PCDH18Q9HCL0 1135 aa9.5□□□□□ -0.89
PDPN-204ENST00000475043 MBNL1Q9NR56 388 aaKnown RBP9.5□□□□□ -0.89
PDPN-204ENST00000475043 GPR27Q9NS67 375 aa9.5□□□□□ -0.89
PDPN-204ENST00000475043 ABHD10Q9NUJ1 306 aa9.5□□□□□ -0.89
PDPN-204ENST00000475043 SEPT3Q9UH03 358 aa9.5□□□□□ -0.89
PDPN-204ENST00000475043 ATP8A1Q9Y2Q0 1164 aa9.5□□□□□ -0.89
PDPN-204ENST00000475043 WDFY3Q8IZQ1 3526 aa9.5□□□□□ -0.89
PDPN-204ENST00000475043 KNL1Q8NG31 2342 aa9.5□□□□□ -0.89
PDPN-204ENST00000475043 CABIN1Q9Y6J0 2220 aa9.5□□□□□ -0.89
PDPN-204ENST00000475043 AKAP13Q12802 2813 aa9.49□□□□□ -0.89
PDPN-204ENST00000475043 TSPAN11A1L157 253 aa9.49□□□□□ -0.89
PDPN-204ENST00000475043 TRABD2BA6NFA1 517 aa9.49□□□□□ -0.89
PDPN-204ENST00000475043 SRRM3A6NNA2 597 aaPredicted RBP9.49□□□□□ -0.89
PDPN-204ENST00000475043 TMEM110-MUSTN1A8MSY1 372 aa9.49□□□□□ -0.89
PDPN-204ENST00000475043 A8MX80 341 aa9.49□□□□□ -0.89
PDPN-204ENST00000475043 SCAMP1O15126 338 aa9.49□□□□□ -0.89
PDPN-204ENST00000475043 MUSKO15146 869 aa9.49□□□□□ -0.89
PDPN-204ENST00000475043 AQP9O43315 295 aa9.49□□□□□ -0.89
PDPN-204ENST00000475043 CSF2P04141 144 aa9.49□□□□□ -0.89
PDPN-204ENST00000475043 CD48P09326 243 aa9.49□□□□□ -0.89
PDPN-204ENST00000475043 MYF5P13349 255 aa9.49□□□□□ -0.89
PDPN-204ENST00000475043 JUPP14923 745 aa9.49□□□□□ -0.89
PDPN-204ENST00000475043 NME1P15531 152 aaKnown RBP9.49□□□□□ -0.89
PDPN-204ENST00000475043 ADKP55263 362 aaKnown RBP9.49□□□□□ -0.89
PDPN-204ENST00000475043 AP1S1P61966 158 aa9.49□□□□□ -0.89
PDPN-204ENST00000475043 YPEL5P62699 121 aa9.49□□□□□ -0.89
PDPN-204ENST00000475043 POLR2LP62875 67 aaKnown RBP9.49□□□□□ -0.89
PDPN-204ENST00000475043 IRF4Q15306 451 aa9.49□□□□□ -0.89
PDPN-204ENST00000475043 ATP13A4Q4VNC1 1196 aa9.49□□□□□ -0.89
PDPN-204ENST00000475043 TPRG1LQ5T0D9 272 aa9.49□□□□□ -0.89
PDPN-204ENST00000475043 FAXCQ5TGI0 409 aa9.49□□□□□ -0.89
PDPN-204ENST00000475043 TMPRSS12Q86WS5 348 aa9.49□□□□□ -0.89
PDPN-204ENST00000475043 ZSWIM9Q86XI8 627 aa9.49□□□□□ -0.89
PDPN-204ENST00000475043 CPNE8Q86YQ8 564 aa9.49□□□□□ -0.89
PDPN-204ENST00000475043 VSTM4Q8IW00 320 aa9.49□□□□□ -0.89
PDPN-204ENST00000475043 TP53I13Q8NBR0 393 aaPredicted RBP9.49□□□□□ -0.89
PDPN-204ENST00000475043 KCTD6Q8NC69 237 aa9.49□□□□□ -0.89
PDPN-204ENST00000475043 ZNF548Q8NEK5 533 aaPredicted RBP9.49□□□□□ -0.89
PDPN-204ENST00000475043 LMX1AQ8TE12 382 aa9.49□□□□□ -0.89
PDPN-204ENST00000475043 BTN2A2Q8WVV5 523 aa9.49□□□□□ -0.89
PDPN-204ENST00000475043 TSC1Q92574 1164 aa9.49□□□□□ -0.89
PDPN-204ENST00000475043 CCDC42Q96M95 316 aa9.49□□□□□ -0.89
PDPN-204ENST00000475043 PSKH2Q96QS6 385 aa9.49□□□□□ -0.89
PDPN-204ENST00000475043 DNAJC7Q99615 494 aa9.49□□□□□ -0.89
PDPN-204ENST00000475043 DUSP23Q9BVJ7 150 aa9.49□□□□□ -0.89
PDPN-204ENST00000475043 NLGN3Q9NZ94 848 aa9.49□□□□□ -0.89
PDPN-204ENST00000475043 UVRAGQ9P2Y5 699 aa9.49□□□□□ -0.89
PDPN-204ENST00000475043 APOBEC3BQ9UH17 382 aaKnown RBP9.49□□□□□ -0.89
PDPN-204ENST00000475043 KLF15Q9UIH9 416 aa9.49□□□□□ -0.89
PDPN-204ENST00000475043 NENFQ9UMX5 172 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms