RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 XRCC4Q13426 336 aa13.85□□□□□ -0.19
USF1-205ENST00000473969 TMEM52BQ4KMG9 183 aa13.85□□□□□ -0.19
USF1-205ENST00000473969 TEX44Q53QW1 395 aa13.85□□□□□ -0.19
USF1-205ENST00000473969 SEL1L3Q68CR1 1132 aa13.85□□□□□ -0.19
USF1-205ENST00000473969 USP45Q70EL2 814 aa13.85□□□□□ -0.19
USF1-205ENST00000473969 IQCHQ86VS3 1027 aa13.85□□□□□ -0.19
USF1-205ENST00000473969 MINDY1Q8N5J2 469 aa13.85□□□□□ -0.19
USF1-205ENST00000473969 MFSD2AQ8NA29 543 aa13.85□□□□□ -0.19
USF1-205ENST00000473969 ASB12Q8WXK4 309 aa13.85□□□□□ -0.19
USF1-205ENST00000473969 ECHDC3Q96DC8 303 aa13.85□□□□□ -0.19
USF1-205ENST00000473969 KLHDC7BQ96G42 594 aa13.85□□□□□ -0.19
USF1-205ENST00000473969 AGAP3Q96P47 875 aa13.85□□□□□ -0.19
USF1-205ENST00000473969 IL12RB2Q99665 862 aa13.85□□□□□ -0.19
USF1-205ENST00000473969 MYOCQ99972 504 aa13.85□□□□□ -0.19
USF1-205ENST00000473969 WRAP53Q9BUR4 548 aaKnown RBP13.85□□□□□ -0.19
USF1-205ENST00000473969 EBF2Q9HAK2 575 aa13.85□□□□□ -0.19
USF1-205ENST00000473969 CEP192Q8TEP8 1941 aa13.85□□□□□ -0.19
USF1-205ENST00000473969 GON4LQ3T8J9 2241 aa13.84□□□□□ -0.19
USF1-205ENST00000473969 DFNA5O60443 496 aa13.84□□□□□ -0.19
USF1-205ENST00000473969 MSNP26038 577 aaKnown RBP13.84□□□□□ -0.19
USF1-205ENST00000473969 ID4P47928 161 aa13.84□□□□□ -0.19
USF1-205ENST00000473969 EIF3EP60228 445 aaKnown RBP13.84□□□□□ -0.19
USF1-205ENST00000473969 OTUD4Q01804 1114 aaKnown RBP13.84□□□□□ -0.19
USF1-205ENST00000473969 ADCY2Q08462 1091 aa13.84□□□□□ -0.19
USF1-205ENST00000473969 ZBTB17Q13105 803 aa13.84□□□□□ -0.19
USF1-205ENST00000473969 PRKD1Q15139 912 aaPredicted RBP13.84□□□□□ -0.19
USF1-205ENST00000473969 KIF19Q2TAC6 998 aa13.84□□□□□ -0.19
USF1-205ENST00000473969 TMEM259Q4ZIN3 620 aa13.84□□□□□ -0.19
USF1-205ENST00000473969 ALG1LQ6GMV1 187 aa13.84□□□□□ -0.19
USF1-205ENST00000473969 CCDC70Q6NSX1 233 aa13.84□□□□□ -0.19
USF1-205ENST00000473969 DARS2Q6PI48 645 aaKnown RBP13.84□□□□□ -0.19
USF1-205ENST00000473969 B4GALNT4Q76KP1 1039 aa13.84□□□□□ -0.19
USF1-205ENST00000473969 PID1Q7Z2X4 250 aa13.84□□□□□ -0.19
USF1-205ENST00000473969 CDKL3Q8IVW4 592 aaPredicted RBP13.84□□□□□ -0.19
USF1-205ENST00000473969 HTR3CQ8WXA8 447 aa13.84□□□□□ -0.19
USF1-205ENST00000473969 VAT1Q99536 393 aa13.84□□□□□ -0.19
USF1-205ENST00000473969 ORAI3Q9BRQ5 295 aa13.84□□□□□ -0.19
USF1-205ENST00000473969 RTKNQ9BST9 563 aa13.84□□□□□ -0.19
USF1-205ENST00000473969 C1QTNF2Q9BXJ5 285 aa13.84□□□□□ -0.19
USF1-205ENST00000473969 CEP41Q9BYV8 373 aa13.84□□□□□ -0.19
USF1-205ENST00000473969 GAREM1Q9H706 876 aa13.84□□□□□ -0.19
USF1-205ENST00000473969 FZD3Q9NPG1 666 aa13.84□□□□□ -0.19
USF1-205ENST00000473969 GDF3Q9NR23 364 aa13.84□□□□□ -0.19
USF1-205ENST00000473969 RXFP3Q9NSD7 469 aa13.84□□□□□ -0.19
USF1-205ENST00000473969 KLHL8Q9P2G9 620 aaPredicted RBP13.84□□□□□ -0.19
USF1-205ENST00000473969 GGT7Q9UJ14 662 aa13.84□□□□□ -0.19
USF1-205ENST00000473969 SNX11Q9Y5W9 270 aa13.84□□□□□ -0.19
USF1-205ENST00000473969 HS3ST3A1Q9Y663 406 aa13.84□□□□□ -0.19
USF1-205ENST00000473969 VPS13AQ96RL7 3174 aa13.84□□□□□ -0.19
USF1-205ENST00000473969 CFAP69A5D8W1 941 aa13.83□□□□□ -0.2
USF1-205ENST00000473969 A6NNZ2 444 aa13.83□□□□□ -0.2
USF1-205ENST00000473969 C10orf142B7Z368 130 aa13.83□□□□□ -0.2
USF1-205ENST00000473969 TLR4O00206 839 aa13.83□□□□□ -0.2
USF1-205ENST00000473969 SLC30A4O14863 429 aa13.83□□□□□ -0.2
USF1-205ENST00000473969 PGLSO95336 258 aa13.83□□□□□ -0.2
USF1-205ENST00000473969 PRKCGP05129 697 aa13.83□□□□□ -0.2
USF1-205ENST00000473969 ELFN1P0C7U0 828 aa13.83□□□□□ -0.2
USF1-205ENST00000473969 ITIH2P19823 946 aa13.83□□□□□ -0.2
USF1-205ENST00000473969 PTPN3P26045 913 aa13.83□□□□□ -0.2
USF1-205ENST00000473969 CD86P42081 329 aa13.83□□□□□ -0.2
USF1-205ENST00000473969 LIG3P49916 1009 aa13.83□□□□□ -0.2
USF1-205ENST00000473969 TRAF2Q12933 501 aa13.83□□□□□ -0.2
USF1-205ENST00000473969 ARHGEF7Q14155 803 aa13.83□□□□□ -0.2
USF1-205ENST00000473969 PUM1Q14671 1186 aaKnown RBP eCLIP13.83□□□□□ -0.2
USF1-205ENST00000473969 SUZ12Q15022 739 aaKnown RBP13.83□□□□□ -0.2
USF1-205ENST00000473969 NOMO1Q15155 1222 aa13.83□□□□□ -0.2
USF1-205ENST00000473969 HLA-BQ31612 363 aa13.83□□□□□ -0.2
USF1-205ENST00000473969 MEI1Q5TIA1 1274 aa13.83□□□□□ -0.2
USF1-205ENST00000473969 AADACL2Q6P093 401 aa13.83□□□□□ -0.2
USF1-205ENST00000473969 LAYNQ6UX15 382 aa13.83□□□□□ -0.2
USF1-205ENST00000473969 DCP2Q8IU60 420 aaKnown RBP13.83□□□□□ -0.2
USF1-205ENST00000473969 OXR1Q8N573 874 aa13.83□□□□□ -0.2
USF1-205ENST00000473969 DENND6BQ8NEG7 585 aa13.83□□□□□ -0.2
USF1-205ENST00000473969 ACTL9Q8TC94 416 aa13.83□□□□□ -0.2
USF1-205ENST00000473969 VOPP1Q96AW1 172 aa13.83□□□□□ -0.2
USF1-205ENST00000473969 IFT43Q96FT9 208 aa13.83□□□□□ -0.2
USF1-205ENST00000473969 PDLIM2Q96JY6 352 aa13.83□□□□□ -0.2
USF1-205ENST00000473969 QKIQ96PU8 341 aaKnown RBP eCLIP13.83□□□□□ -0.2
USF1-205ENST00000473969 LENG8Q96PV6 779 aaPredicted RBP13.83□□□□□ -0.2
USF1-205ENST00000473969 ADGRE3Q9BY15 652 aa13.83□□□□□ -0.2
USF1-205ENST00000473969 SLC25A51Q9H1U9 297 aa13.83□□□□□ -0.2
USF1-205ENST00000473969 GLOD4Q9HC38 313 aa13.83□□□□□ -0.2
USF1-205ENST00000473969 PCDH9Q9HC56 1237 aa13.83□□□□□ -0.2
USF1-205ENST00000473969 TRHDEQ9UKU6 1024 aa13.83□□□□□ -0.2
USF1-205ENST00000473969 DNPEPQ9ULA0 475 aa13.83□□□□□ -0.2
USF1-205ENST00000473969 SLCO1B1Q9Y6L6 691 aa13.83□□□□□ -0.2
USF1-205ENST00000473969 GVINP1Q7Z2Y8 2422 aa13.82□□□□□ -0.2
USF1-205ENST00000473969 A0A1W2PR77 199 aa13.82□□□□□ -0.2
USF1-205ENST00000473969 A8MX80 341 aa13.82□□□□□ -0.2
USF1-205ENST00000473969 CDX4O14627 284 aaPredicted RBP13.82□□□□□ -0.2
USF1-205ENST00000473969 KCNK3O14649 394 aa13.82□□□□□ -0.2
USF1-205ENST00000473969 THEGLP0DJG4 465 aa13.82□□□□□ -0.2
USF1-205ENST00000473969 RBP3P10745 1247 aa13.82□□□□□ -0.2
USF1-205ENST00000473969 C6P13671 934 aa13.82□□□□□ -0.2
USF1-205ENST00000473969 VIPR1P32241 457 aa13.82□□□□□ -0.2
USF1-205ENST00000473969 MMP12P39900 470 aa13.82□□□□□ -0.2
USF1-205ENST00000473969 RPL26P61254 145 aaKnown RBP13.82□□□□□ -0.2
USF1-205ENST00000473969 NIPAL4Q0D2K0 466 aa13.82□□□□□ -0.2
USF1-205ENST00000473969 CCDC173Q0VFZ6 552 aa13.82□□□□□ -0.2
USF1-205ENST00000473969 LRRC14Q15048 493 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms