RNA–Protein interactions for RNA: ENST00000473820.1

PPP2R1A-208, Transcript of protein phosphatase 2 scaffold subunit Aalpha, human

TSL 2

Gene PPP2R1A, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP2R1A-208	ENST00000473820	BTBD1	Q9H0C5	482 aa		10.13	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	PCED1A	Q9H1Q7	454 aa		10.13	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	DPH5	Q9H2P9	285 aa		10.13	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	DHX35	Q9H5Z1	703 aa	Known RBP	10.13	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	PRORY	Q9H606	182 aa		10.13	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	ROPN1	Q9HAT0	212 aa	Predicted RBP	10.13	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	TM9SF3	Q9HD45	589 aa		10.13	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	GPATCH2L	Q9NWQ4	482 aa		10.13	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	PPARGC1A	Q9UBK2	798 aa	Known RBP	10.13	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	PLAA	Q9Y263	795 aa		10.13	□□□□□ -0.79
PPP2R1A-208	ENST00000473820		J3QKU1	62 aa		10.12	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	CBX4	O00257	560 aa		10.12	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	DFNA5	O60443	496 aa		10.12	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	LRCH4	O75427	683 aa		10.12	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	ZNF189	O75820	626 aa	Predicted RBP	10.12	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	C1QL1	O75973	258 aa		10.12	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	SEMA4F	O95754	770 aa		10.12	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	DNTT	P04053	509 aa		10.12	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	ITGAV	P06756	1048 aa		10.12	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	SRPRA	P08240	638 aa	Known RBP	10.12	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	RHOQ	P17081	205 aa		10.12	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	L1CAM	P32004	1257 aa		10.12	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	ACSL1	P33121	698 aa		10.12	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	PCK1	P35558	622 aa		10.12	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	GRIA4	P48058	902 aa		10.12	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	COPA	P53621	1224 aa		10.12	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	PMS2	P54278	862 aa		10.12	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	NRG1	Q02297	640 aa	Predicted RBP	10.12	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	CFHR1	Q03591	330 aa		10.12	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	ADCY2	Q08462	1091 aa		10.12	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	IFFO1	Q0D2I5	559 aa		10.12	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	TARDBP	Q13148	414 aa	Known RBP eCLIP	10.12	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	CA9	Q16790	459 aa		10.12	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	HNRNPA1L2	Q32P51	320 aa	Known RBP	10.12	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	TFDP3	Q5H9I0	405 aa		10.12	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	KCNT1	Q5JUK3	1230 aa		10.12	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	PRAMEF14	Q5SWL7	426 aa		10.12	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	CEP85L	Q5SZL2	805 aa		10.12	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	ARTN	Q5T4W7	220 aa		10.12	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	TTC27	Q6P3X3	843 aa		10.12	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	RELL1	Q8IUW5	271 aa		10.12	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	OR7D4	Q8NG98	312 aa		10.12	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	OR2T3	Q8NH03	318 aa		10.12	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	C1orf216	Q8TAB5	229 aa		10.12	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	ALG14	Q96F25	216 aa		10.12	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	PGM2	Q96G03	612 aa		10.12	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	MRGPRX3	Q96LB0	322 aa		10.12	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	EPAS1	Q99814	870 aa		10.12	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	C2orf49	Q9BVC5	232 aa	Predicted RBP	10.12	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	ACE2	Q9BYF1	805 aa	Predicted RBP	10.12	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	PHACTR1	Q9C0D0	580 aa		10.12	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	ZWILCH	Q9H900	591 aa		10.12	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	CNOT10	Q9H9A5	744 aa	Known RBP	10.12	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	TMBIM4	Q9HC24	238 aa		10.12	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	PRSS16	Q9NQE7	514 aa		10.12	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	NDFIP2	Q9NV92	336 aa		10.12	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	GRHL1	Q9NZI5	618 aa		10.12	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	SLC25A13	Q9UJS0	675 aa		10.12	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	AP4E1	Q9UPM8	1137 aa		10.12	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	NCKAP1	Q9Y2A7	1128 aa		10.12	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	10.12	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	PCDHGA1	Q9Y5H4	931 aa		10.12	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	OR51B4	Q9Y5P0	310 aa		10.12	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	TEX51	A0A1B0GUA7	166 aa		10.11	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	ILVBL	A1L0T0	632 aa		10.11	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	FAM47DP	A6NHR8	397 aa		10.11	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	ZNF487	B1APH4	448 aa		10.11	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	TLX3	O43711	291 aa	Predicted RBP	10.11	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	KALRN	O60229	2985 aa		10.11	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	BNIP3L	O60238	219 aa		10.11	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	SNAP91	O60641	907 aa		10.11	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	SIN3B	O75182	1162 aa		10.11	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	MT-CO1	P00395	513 aa		10.11	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	IGLV3-19	P01714	112 aa		10.11	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	KRT1	P04264	644 aa		10.11	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	C1S	P09871	688 aa		10.11	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	TCF4	P15884	667 aa		10.11	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	CD27	P26842	260 aa		10.11	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	ATP5D	P30049	168 aa		10.11	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	RPL21	P46778	160 aa	Known RBP	10.11	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	AIF1	P55008	147 aa		10.11	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	PLTP	P55058	493 aa		10.11	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	CXADR	P78310	365 aa		10.11	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	GNA12	Q03113	381 aa		10.11	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	CAMK2G	Q13555	558 aa	Predicted RBP	10.11	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	PPP6R3	Q5H9R7	873 aa	Predicted RBP	10.11	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	MANEAL	Q5VSG8	457 aa		10.11	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	LAYN	Q6UX15	382 aa		10.11	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	ZDHHC24	Q6UX98	284 aa		10.11	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	LINGO4	Q6UY18	593 aa		10.11	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	ZNF354C	Q86Y25	554 aa		10.11	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	GATAD2A	Q86YP4	633 aa		10.11	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	CNPY4	Q8N129	248 aa		10.11	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	ATP11C	Q8NB49	1132 aa		10.11	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	KDM1B	Q8NB78	822 aa		10.11	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	UBLCP1	Q8WVY7	318 aa	Predicted RBP	10.11	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	HSPH1	Q92598	858 aa		10.11	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	FGF11	Q92914	225 aa		10.11	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	BIRC7	Q96CA5	298 aa		10.11	□□□□□ -0.79
PPP2R1A-208	ENST00000473820	MYO19	Q96H55	970 aa		10.11	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms