RNA–Protein interactions for RNA: ENST00000473711.1

SP140-208, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 644 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-208ENST00000473711 MSH2P43246 934 aa10.82□□□□□ -0.68
SP140-208ENST00000473711 SOX9P48436 509 aa10.82□□□□□ -0.68
SP140-208ENST00000473711 BCL2L1Q07817 233 aa10.82□□□□□ -0.68
SP140-208ENST00000473711 MSLNQ13421 630 aaPredicted RBP10.82□□□□□ -0.68
SP140-208ENST00000473711 CRYMQ14894 314 aa10.82□□□□□ -0.68
SP140-208ENST00000473711 SMAD1Q15797 465 aaKnown RBP10.82□□□□□ -0.68
SP140-208ENST00000473711 PTPRNQ16849 979 aa10.82□□□□□ -0.68
SP140-208ENST00000473711 KLHL38Q2WGJ6 581 aa10.82□□□□□ -0.68
SP140-208ENST00000473711 KBTBD12Q3ZCT8 623 aa10.82□□□□□ -0.68
SP140-208ENST00000473711 SWT1Q5T5J6 900 aaKnown RBP10.82□□□□□ -0.68
SP140-208ENST00000473711 KCTD16Q68DU8 428 aa10.82□□□□□ -0.68
SP140-208ENST00000473711 DPY19L3Q6ZPD9 716 aa10.82□□□□□ -0.68
SP140-208ENST00000473711 Q6ZVU0 165 aa10.82□□□□□ -0.68
SP140-208ENST00000473711 CROCCP2Q86T23 111 aa10.82□□□□□ -0.68
SP140-208ENST00000473711 TMEM135Q86UB9 458 aa10.82□□□□□ -0.68
SP140-208ENST00000473711 SFTPA1Q8IWL2 248 aa10.82□□□□□ -0.68
SP140-208ENST00000473711 CTAGE3PQ8IX95 158 aa10.82□□□□□ -0.68
SP140-208ENST00000473711 PHTF2Q8N3S3 785 aa10.82□□□□□ -0.68
SP140-208ENST00000473711 PCDH20Q8N6Y1 951 aaKnown RBP10.82□□□□□ -0.68
SP140-208ENST00000473711 PAF1Q8N7H5 531 aa10.82□□□□□ -0.68
SP140-208ENST00000473711 PPM1NQ8N819 430 aa10.82□□□□□ -0.68
SP140-208ENST00000473711 CHST14Q8NCH0 376 aa10.82□□□□□ -0.68
SP140-208ENST00000473711 LPCAT1Q8NF37 534 aa10.82□□□□□ -0.68
SP140-208ENST00000473711 OR2AP1Q8NGE2 309 aa10.82□□□□□ -0.68
SP140-208ENST00000473711 BLOC1S5Q8TDH9 187 aa10.82□□□□□ -0.68
SP140-208ENST00000473711 MFSD3Q96ES6 412 aa10.82□□□□□ -0.68
SP140-208ENST00000473711 ZNF778Q96MU6 729 aa10.82□□□□□ -0.68
SP140-208ENST00000473711 GUCD1Q96NT3 240 aa10.82□□□□□ -0.68
SP140-208ENST00000473711 SMIM14Q96QK8 99 aa10.82□□□□□ -0.68
SP140-208ENST00000473711 TDRD1Q9BXT4 1180 aaKnown RBP10.82□□□□□ -0.68
SP140-208ENST00000473711 ZMYND15Q9H091 742 aa10.82□□□□□ -0.68
SP140-208ENST00000473711 MTG2Q9H4K7 406 aa10.82□□□□□ -0.68
SP140-208ENST00000473711 PPANQ9NQ55 473 aaKnown RBP10.82□□□□□ -0.68
SP140-208ENST00000473711 SMYD2Q9NRG4 433 aa10.82□□□□□ -0.68
SP140-208ENST00000473711 MOCS1Q9NZB8 636 aa10.82□□□□□ -0.68
SP140-208ENST00000473711 CTNNAL1Q9UBT7 734 aa10.82□□□□□ -0.68
SP140-208ENST00000473711 LIMD1Q9UGP4 676 aa10.82□□□□□ -0.68
SP140-208ENST00000473711 TBK1Q9UHD2 729 aa10.82□□□□□ -0.68
SP140-208ENST00000473711 PLA2G4CQ9UP65 541 aa10.82□□□□□ -0.68
SP140-208ENST00000473711 TCAF1Q9Y4C2 921 aa10.82□□□□□ -0.68
SP140-208ENST00000473711 PCDHB9Q9Y5E1 797 aa10.82□□□□□ -0.68
SP140-208ENST00000473711 FAM169AQ9Y6X4 670 aa10.82□□□□□ -0.68
SP140-208ENST00000473711 ZCWPW2A0A1B0GU75 182 aa10.81□□□□□ -0.68
SP140-208ENST00000473711 HEATR9A2RTY3 570 aa10.81□□□□□ -0.68
SP140-208ENST00000473711 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.81□□□□□ -0.68
SP140-208ENST00000473711 ARNTLO00327 626 aa10.81□□□□□ -0.68
SP140-208ENST00000473711 TIMM44O43615 452 aa10.81□□□□□ -0.68
SP140-208ENST00000473711 ALDH1A2O94788 518 aa10.81□□□□□ -0.68
SP140-208ENST00000473711 POP4O95707 220 aaKnown RBP10.81□□□□□ -0.68
SP140-208ENST00000473711 C1QAP02745 245 aa10.81□□□□□ -0.68
SP140-208ENST00000473711 ERVK-10P10266 1014 aa10.81□□□□□ -0.68
SP140-208ENST00000473711 CA4P22748 312 aa10.81□□□□□ -0.68
SP140-208ENST00000473711 PRKCHP24723 683 aa10.81□□□□□ -0.68
SP140-208ENST00000473711 ABL2P42684 1182 aa10.81□□□□□ -0.68
SP140-208ENST00000473711 MAPK8P45983 427 aa10.81□□□□□ -0.68
SP140-208ENST00000473711 RECQLP46063 649 aaPredicted RBP10.81□□□□□ -0.68
SP140-208ENST00000473711 CCNHP51946 323 aaPredicted RBP10.81□□□□□ -0.68
SP140-208ENST00000473711 ST8SIA6P61647 398 aa10.81□□□□□ -0.68
SP140-208ENST00000473711 RAD51Q06609 339 aa10.81□□□□□ -0.68
SP140-208ENST00000473711 QPCTQ16769 361 aa10.81□□□□□ -0.68
SP140-208ENST00000473711 ARMC12Q5T9G4 340 aa10.81□□□□□ -0.68
SP140-208ENST00000473711 AGBL2Q5U5Z8 902 aa10.81□□□□□ -0.68
SP140-208ENST00000473711 ESRP1Q6NXG1 681 aaKnown RBP10.81□□□□□ -0.68
SP140-208ENST00000473711 KRT222Q8N1A0 295 aa10.81□□□□□ -0.68
SP140-208ENST00000473711 DEFB123Q8N688 67 aa10.81□□□□□ -0.68
SP140-208ENST00000473711 ZNF366Q8N895 744 aa10.81□□□□□ -0.68
SP140-208ENST00000473711 TERB1Q8NA31 727 aa10.81□□□□□ -0.68
SP140-208ENST00000473711 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.81□□□□□ -0.68
SP140-208ENST00000473711 CSGALNACT1Q8TDX6 532 aa10.81□□□□□ -0.68
SP140-208ENST00000473711 FRS2Q8WU20 508 aa10.81□□□□□ -0.68
SP140-208ENST00000473711 HLA-CQ95604 372 aa10.81□□□□□ -0.68
SP140-208ENST00000473711 CHFRQ96EP1 664 aa10.81□□□□□ -0.68
SP140-208ENST00000473711 MYO19Q96H55 970 aa10.81□□□□□ -0.68
SP140-208ENST00000473711 PKNOX2Q96KN3 472 aa10.81□□□□□ -0.68
SP140-208ENST00000473711 ATP6V1G3Q96LB4 118 aa10.81□□□□□ -0.68
SP140-208ENST00000473711 RANBP9Q96S59 729 aa10.81□□□□□ -0.68
SP140-208ENST00000473711 ADGRE3Q9BY15 652 aa10.81□□□□□ -0.68
SP140-208ENST00000473711 ZDHHC6Q9H6R6 413 aa10.81□□□□□ -0.68
SP140-208ENST00000473711 ATP13A3Q9H7F0 1226 aa10.81□□□□□ -0.68
SP140-208ENST00000473711 MRM3Q9HC36 420 aaKnown RBP10.81□□□□□ -0.68
SP140-208ENST00000473711 C20orf96Q9NUD7 363 aaPredicted RBP10.81□□□□□ -0.68
SP140-208ENST00000473711 IL1RAPL1Q9NZN1 696 aa10.81□□□□□ -0.68
SP140-208ENST00000473711 VPS18Q9P253 973 aa10.81□□□□□ -0.68
SP140-208ENST00000473711 SLC2A6Q9UGQ3 507 aa10.81□□□□□ -0.68
SP140-208ENST00000473711 SLC24A2Q9UI40 661 aa10.81□□□□□ -0.68
SP140-208ENST00000473711 NOVA2Q9UNW9 492 aaKnown RBP10.81□□□□□ -0.68
SP140-208ENST00000473711 SLC8A2Q9UPR5 921 aa10.81□□□□□ -0.68
SP140-208ENST00000473711 KCTD3Q9Y597 815 aa10.81□□□□□ -0.68
SP140-208ENST00000473711 SPO11Q9Y5K1 396 aa10.81□□□□□ -0.68
SP140-208ENST00000473711 DOCK8Q8NF50 2099 aa10.81□□□□□ -0.68
SP140-208ENST00000473711 ANTXRLA6NF34 631 aa10.8□□□□□ -0.68
SP140-208ENST00000473711 FAM159BA6NKW6 160 aa10.8□□□□□ -0.68
SP140-208ENST00000473711 FOXO6A8MYZ6 492 aa10.8□□□□□ -0.68
SP140-208ENST00000473711 ANKRD66B4E2M5 251 aa10.8□□□□□ -0.68
SP140-208ENST00000473711 TRAFD1O14545 582 aaPredicted RBP10.8□□□□□ -0.68
SP140-208ENST00000473711 POLR3GO15318 223 aaPredicted RBP10.8□□□□□ -0.68
SP140-208ENST00000473711 BUD23O43709 281 aaKnown RBP10.8□□□□□ -0.68
SP140-208ENST00000473711 FZD6O60353 706 aa10.8□□□□□ -0.68
SP140-208ENST00000473711 UGT1A9O60656 530 aa10.8□□□□□ -0.68
SP140-208ENST00000473711 FAM155BO75949 473 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms