RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 SMPD3Q9NY59 655 aaPredicted RBP6.16□□□□□ -1.42
HERC4-209ENST00000473533 CCDC167Q9P0B6 97 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 GMIPQ9P107 970 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 ABCD2Q9UBJ2 740 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 hCG_2014768A0A024R1R8 64 aa6.15□□□□□ -1.42
HERC4-209ENST00000473533 E2F8A0AVK6 867 aa6.15□□□□□ -1.42
HERC4-209ENST00000473533 IFRD1O00458 451 aaPredicted RBP6.15□□□□□ -1.42
HERC4-209ENST00000473533 KPNA4O00629 521 aaPredicted RBP6.15□□□□□ -1.42
HERC4-209ENST00000473533 TULP3O75386 442 aa6.15□□□□□ -1.42
HERC4-209ENST00000473533 ARIH2O95376 493 aa6.15□□□□□ -1.42
HERC4-209ENST00000473533 LDLRP01130 860 aa6.15□□□□□ -1.42
HERC4-209ENST00000473533 JCHAINP01591 159 aa6.15□□□□□ -1.42
HERC4-209ENST00000473533 AMHP03971 560 aa6.15□□□□□ -1.42
HERC4-209ENST00000473533 DPEP1P16444 411 aa6.15□□□□□ -1.42
HERC4-209ENST00000473533 GRIA3P42263 894 aa6.15□□□□□ -1.42
HERC4-209ENST00000473533 SLC7A2P52569 658 aa6.15□□□□□ -1.42
HERC4-209ENST00000473533 ATXN1P54253 815 aaKnown RBP6.15□□□□□ -1.42
HERC4-209ENST00000473533 EEFSECP57772 596 aaKnown RBP6.15□□□□□ -1.42
HERC4-209ENST00000473533 PHEXP78562 749 aa6.15□□□□□ -1.42
HERC4-209ENST00000473533 OCA2Q04671 838 aa6.15□□□□□ -1.42
HERC4-209ENST00000473533 CBX3Q13185 183 aa6.15□□□□□ -1.42
HERC4-209ENST00000473533 SLC14A2Q15849 920 aa6.15□□□□□ -1.42
HERC4-209ENST00000473533 ATP6AP1Q15904 470 aa6.15□□□□□ -1.42
HERC4-209ENST00000473533 DALRD3Q5D0E6 543 aaKnown RBP6.15□□□□□ -1.42
HERC4-209ENST00000473533 BRMS1LQ5PSV4 323 aa6.15□□□□□ -1.42
HERC4-209ENST00000473533 TMEM198Q66K66 360 aa6.15□□□□□ -1.42
HERC4-209ENST00000473533 C8orf82Q6P1X6 216 aaPredicted RBP6.15□□□□□ -1.42
HERC4-209ENST00000473533 LIMS2Q7Z4I7 341 aa6.15□□□□□ -1.42
HERC4-209ENST00000473533 SFRP1Q8N474 314 aa6.15□□□□□ -1.42
HERC4-209ENST00000473533 TMEM151AQ8N4L1 468 aa6.15□□□□□ -1.42
HERC4-209ENST00000473533 TTC30BQ8N4P2 665 aa6.15□□□□□ -1.42
HERC4-209ENST00000473533 CHCHD4Q8N4Q1 142 aa6.15□□□□□ -1.42
HERC4-209ENST00000473533 TRPV3Q8NET8 790 aa6.15□□□□□ -1.42
HERC4-209ENST00000473533 ZSCAN18Q8TBC5 510 aaPredicted RBP6.15□□□□□ -1.42
HERC4-209ENST00000473533 CLEC4CQ8WTT0 213 aa6.15□□□□□ -1.42
HERC4-209ENST00000473533 RAB2BQ8WUD1 216 aa6.15□□□□□ -1.42
HERC4-209ENST00000473533 TRUB1Q8WWH5 349 aaKnown RBP6.15□□□□□ -1.42
HERC4-209ENST00000473533 PEX13Q92968 403 aa6.15□□□□□ -1.42
HERC4-209ENST00000473533 C12orf43Q96C57 262 aaKnown RBP6.15□□□□□ -1.42
HERC4-209ENST00000473533 SEMA6AQ9H2E6 1030 aa6.15□□□□□ -1.42
HERC4-209ENST00000473533 GLOD4Q9HC38 313 aa6.15□□□□□ -1.42
HERC4-209ENST00000473533 AGPAT4Q9NRZ5 378 aa6.15□□□□□ -1.42
HERC4-209ENST00000473533 SLC38A7Q9NVC3 462 aa6.15□□□□□ -1.42
HERC4-209ENST00000473533 PIH1D1Q9NWS0 290 aaKnown RBP6.15□□□□□ -1.42
HERC4-209ENST00000473533 ANAPC2Q9UJX6 822 aa6.15□□□□□ -1.42
HERC4-209ENST00000473533 LTBP3Q9NS15 1303 aa6.15□□□□□ -1.42
HERC4-209ENST00000473533 COL4A5P29400 1685 aa6.15□□□□□ -1.43
HERC4-209ENST00000473533 PTPRFP10586 1907 aa6.15□□□□□ -1.43
HERC4-209ENST00000473533 DNAJC25-GNG10A0A024R161 153 aa6.15□□□□□ -1.43
HERC4-209ENST00000473533 ZNF839A8K0R7 811 aa6.15□□□□□ -1.43
HERC4-209ENST00000473533 USP12O75317 370 aa6.15□□□□□ -1.43
HERC4-209ENST00000473533 GABBR2O75899 941 aa6.15□□□□□ -1.43
HERC4-209ENST00000473533 ALBP02768 609 aa6.15□□□□□ -1.43
HERC4-209ENST00000473533 FGF4P08620 206 aa6.15□□□□□ -1.43
HERC4-209ENST00000473533 PDGFRBP09619 1106 aa6.15□□□□□ -1.43
HERC4-209ENST00000473533 ALOX5P09917 674 aa6.15□□□□□ -1.43
HERC4-209ENST00000473533 IQCF3P0C7M6 154 aa6.15□□□□□ -1.43
HERC4-209ENST00000473533 OCM2P0CE71 109 aa6.15□□□□□ -1.43
HERC4-209ENST00000473533 OCMP0CE72 109 aaPredicted RBP6.15□□□□□ -1.43
HERC4-209ENST00000473533 PTPN1P18031 435 aaKnown RBP6.15□□□□□ -1.43
HERC4-209ENST00000473533 LBPP18428 481 aa6.15□□□□□ -1.43
HERC4-209ENST00000473533 MAP4P27816 1152 aaKnown RBP6.15□□□□□ -1.43
HERC4-209ENST00000473533 DPP6P42658 865 aa6.15□□□□□ -1.43
HERC4-209ENST00000473533 DAOAP59103 153 aa6.15□□□□□ -1.43
HERC4-209ENST00000473533 PRAMEP78395 509 aa6.15□□□□□ -1.43
HERC4-209ENST00000473533 FSCN1Q16658 493 aaKnown RBP6.15□□□□□ -1.43
HERC4-209ENST00000473533 SLC36A3Q495N2 470 aa6.15□□□□□ -1.43
HERC4-209ENST00000473533 RBM48Q5RL73 367 aaKnown RBP6.15□□□□□ -1.43
HERC4-209ENST00000473533 BROXQ5VW32 411 aa6.15□□□□□ -1.43
HERC4-209ENST00000473533 NIPAL1Q6NVV3 410 aa6.15□□□□□ -1.43
HERC4-209ENST00000473533 ATG14Q6ZNE5 492 aa6.15□□□□□ -1.43
HERC4-209ENST00000473533 SPRED1Q7Z699 444 aa6.15□□□□□ -1.43
HERC4-209ENST00000473533 TXNDC5Q8NBS9 432 aaKnown RBP6.15□□□□□ -1.43
HERC4-209ENST00000473533 GIPC3Q8TF64 312 aa6.15□□□□□ -1.43
HERC4-209ENST00000473533 LRRN4Q8WUT4 740 aa6.15□□□□□ -1.43
HERC4-209ENST00000473533 HEXDCQ8WVB3 486 aa6.15□□□□□ -1.43
HERC4-209ENST00000473533 RNF34Q969K3 372 aa6.15□□□□□ -1.43
HERC4-209ENST00000473533 C19orf60Q96EN9 201 aa6.15□□□□□ -1.43
HERC4-209ENST00000473533 GPR78Q96P69 363 aa6.15□□□□□ -1.43
HERC4-209ENST00000473533 NUSAP1Q9BXS6 441 aaKnown RBP6.15□□□□□ -1.43
HERC4-209ENST00000473533 CEP41Q9BYV8 373 aa6.15□□□□□ -1.43
HERC4-209ENST00000473533 DDIT4Q9NX09 232 aa6.15□□□□□ -1.43
HERC4-209ENST00000473533 SUN2Q9UH99 717 aa6.15□□□□□ -1.43
HERC4-209ENST00000473533 PACSIN3Q9UKS6 424 aa6.15□□□□□ -1.43
HERC4-209ENST00000473533 MFHAS1Q9Y4C4 1052 aa6.15□□□□□ -1.43
HERC4-209ENST00000473533 TLL2Q9Y6L7 1015 aa6.15□□□□□ -1.43
HERC4-209ENST00000473533 SYNJ2BP-COX16A0A087WUM0 186 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 PRORSD1PA6NEY8 169 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 A8MT66 165 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 SLC7A4O43246 635 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 COQ9O75208 318 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 CRCPO75575 148 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 CSPG5O95196 566 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 GJB1P08034 283 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 SBK3P0C264 359 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 JUNBP17275 347 aaPredicted RBP6.14□□□□□ -1.43
HERC4-209ENST00000473533 CCNA2P20248 432 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 PCSK6P29122 969 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 CD68P34810 354 aaPredicted RBP6.14□□□□□ -1.43
HERC4-209ENST00000473533 AVPR1AP37288 418 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms