RNA–Protein interactions for RNA: ENST00000472756.1

VPS45-206, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 352 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-206ENST00000472756 RAB6CQ9H0N0 254 aa2.53□□□□□ -2
VPS45-206ENST00000472756 ABHD16BQ9H3Z7 469 aa2.53□□□□□ -2
VPS45-206ENST00000472756 PRDM12Q9H4Q4 367 aa2.53□□□□□ -2
VPS45-206ENST00000472756 AZI2Q9H6S1 392 aa2.53□□□□□ -2
VPS45-206ENST00000472756 ZCCHC17Q9NP64 241 aaKnown RBP2.53□□□□□ -2
VPS45-206ENST00000472756 GDF3Q9NR23 364 aa2.53□□□□□ -2
VPS45-206ENST00000472756 RBM12Q9NTZ6 932 aaKnown RBP2.53□□□□□ -2
VPS45-206ENST00000472756 TMEM140Q9NV12 185 aa2.53□□□□□ -2
VPS45-206ENST00000472756 MIOSQ9NXC5 875 aa2.53□□□□□ -2
VPS45-206ENST00000472756 RBAKQ9NYW8 714 aaPredicted RBP2.53□□□□□ -2
VPS45-206ENST00000472756 ERAP1Q9NZ08 941 aa2.53□□□□□ -2
VPS45-206ENST00000472756 HMGXB4Q9UGU5 601 aa2.53□□□□□ -2
VPS45-206ENST00000472756 FAM153AQ9UHL3 310 aa2.53□□□□□ -2
VPS45-206ENST00000472756 DPP7Q9UHL4 492 aa2.53□□□□□ -2
VPS45-206ENST00000472756 ZHX1Q9UKY1 873 aaPredicted RBP2.53□□□□□ -2
VPS45-206ENST00000472756 INTUQ9ULD6 942 aa2.53□□□□□ -2
VPS45-206ENST00000472756 EDARQ9UNE0 448 aa2.53□□□□□ -2
VPS45-206ENST00000472756 JRKLQ9Y4A0 524 aa2.53□□□□□ -2
VPS45-206ENST00000472756 DAAM1Q9Y4D1 1078 aa2.53□□□□□ -2
VPS45-206ENST00000472756 PCDHA3Q9Y5H8 950 aa2.53□□□□□ -2
VPS45-206ENST00000472756 ALG6Q9Y672 507 aa2.53□□□□□ -2
VPS45-206ENST00000472756 BZW2Q9Y6E2 419 aaKnown RBP2.53□□□□□ -2
VPS45-206ENST00000472756 SIP14410 1827 aa2.53□□□□□ -2
VPS45-206ENST00000472756 ARID2Q68CP9 1835 aa2.53□□□□□ -2
VPS45-206ENST00000472756 FNDC1Q4ZHG4 1894 aaPredicted RBP2.52□□□□□ -2.01
VPS45-206ENST00000472756 COL1A2P08123 1366 aa2.52□□□□□ -2.01
VPS45-206ENST00000472756 ZSWIM8A7E2V4 1837 aa2.52□□□□□ -2.01
VPS45-206ENST00000472756 SMIM35A0A1B0GVV1 85 aa2.52□□□□□ -2.01
VPS45-206ENST00000472756 LINC00473A8K010 186 aa2.52□□□□□ -2.01
VPS45-206ENST00000472756 TMEM110-MUSTN1A8MSY1 372 aa2.52□□□□□ -2.01
VPS45-206ENST00000472756 FAM171A2A8MVW0 826 aa2.52□□□□□ -2.01
VPS45-206ENST00000472756 H0YCG3 227 aa2.52□□□□□ -2.01
VPS45-206ENST00000472756 TULP2O00295 520 aa2.52□□□□□ -2.01
VPS45-206ENST00000472756 CES2O00748 559 aa2.52□□□□□ -2.01
VPS45-206ENST00000472756 KIAA0391O15091 583 aaKnown RBP2.52□□□□□ -2.01
VPS45-206ENST00000472756 MAGEB2O15479 319 aa2.52□□□□□ -2.01
VPS45-206ENST00000472756 CLDN3O15551 220 aa2.52□□□□□ -2.01
VPS45-206ENST00000472756 ASAP2O43150 1006 aa2.52□□□□□ -2.01
VPS45-206ENST00000472756 GPR39O43194 453 aa2.52□□□□□ -2.01
VPS45-206ENST00000472756 RAD51CO43502 376 aa2.52□□□□□ -2.01
VPS45-206ENST00000472756 CA12O43570 354 aa2.52□□□□□ -2.01
VPS45-206ENST00000472756 RRP9O43818 475 aaKnown RBP2.52□□□□□ -2.01
VPS45-206ENST00000472756 ZC3H11AO75152 810 aaKnown RBP eCLIP2.52□□□□□ -2.01
VPS45-206ENST00000472756 ENDOD1O94919 500 aa2.52□□□□□ -2.01
VPS45-206ENST00000472756 LDHAP00338 332 aaKnown RBP2.52□□□□□ -2.01
VPS45-206ENST00000472756 CHRNA1P02708 482 aa2.52□□□□□ -2.01
VPS45-206ENST00000472756 MYL3P08590 195 aa2.52□□□□□ -2.01
VPS45-206ENST00000472756 MCF2P10911 925 aa2.52□□□□□ -2.01
VPS45-206ENST00000472756 CYBAP13498 195 aa2.52□□□□□ -2.01
VPS45-206ENST00000472756 DARSP14868 501 aaKnown RBP2.52□□□□□ -2.01
VPS45-206ENST00000472756 TCP1P17987 556 aaKnown RBP2.52□□□□□ -2.01
VPS45-206ENST00000472756 RRM1P23921 792 aa2.52□□□□□ -2.01
VPS45-206ENST00000472756 CTNNA2P26232 953 aa2.52□□□□□ -2.01
VPS45-206ENST00000472756 CCND3P30281 292 aaPredicted RBP2.52□□□□□ -2.01
VPS45-206ENST00000472756 CDH5P33151 784 aaPredicted RBP2.52□□□□□ -2.01
VPS45-206ENST00000472756 USP8P40818 1118 aa2.52□□□□□ -2.01
VPS45-206ENST00000472756 PIK3CAP42336 1068 aa2.52□□□□□ -2.01
VPS45-206ENST00000472756 MATR3P43243 847 aaKnown RBP eCLIP2.52□□□□□ -2.01
VPS45-206ENST00000472756 ID4P47928 161 aa2.52□□□□□ -2.01
VPS45-206ENST00000472756 CARSP49589 748 aaKnown RBP2.52□□□□□ -2.01
VPS45-206ENST00000472756 EFNA5P52803 228 aa2.52□□□□□ -2.01
VPS45-206ENST00000472756 RAD23BP54727 409 aa2.52□□□□□ -2.01
VPS45-206ENST00000472756 MFAP3P55082 362 aa2.52□□□□□ -2.01
VPS45-206ENST00000472756 RPL7AP62424 266 aaKnown RBP2.52□□□□□ -2.01
VPS45-206ENST00000472756 NOMO3P69849 1222 aa2.52□□□□□ -2.01
VPS45-206ENST00000472756 NOP14P78316 857 aaKnown RBP2.52□□□□□ -2.01
VPS45-206ENST00000472756 GPC5P78333 572 aa2.52□□□□□ -2.01
VPS45-206ENST00000472756 CCNA1P78396 465 aa2.52□□□□□ -2.01
VPS45-206ENST00000472756 CBX1P83916 185 aa2.52□□□□□ -2.01
VPS45-206ENST00000472756 ITIH3Q06033 890 aa2.52□□□□□ -2.01
VPS45-206ENST00000472756 MGAT3Q09327 533 aa2.52□□□□□ -2.01
VPS45-206ENST00000472756 BIRC3Q13489 604 aa2.52□□□□□ -2.01
VPS45-206ENST00000472756 MAMLD1Q13495 774 aa2.52□□□□□ -2.01
VPS45-206ENST00000472756 MXD4Q14582 209 aaPredicted RBP2.52□□□□□ -2.01
VPS45-206ENST00000472756 GPNMBQ14956 572 aa2.52□□□□□ -2.01
VPS45-206ENST00000472756 BRD3Q15059 726 aa2.52□□□□□ -2.01
VPS45-206ENST00000472756 PDCD1Q15116 288 aa2.52□□□□□ -2.01
VPS45-206ENST00000472756 RPS6KA1Q15418 735 aa2.52□□□□□ -2.01
VPS45-206ENST00000472756 MAPK6Q16659 721 aa2.52□□□□□ -2.01
VPS45-206ENST00000472756 TCTN1Q2MV58 587 aa2.52□□□□□ -2.01
VPS45-206ENST00000472756 TRIM71Q2Q1W2 868 aaKnown RBP2.52□□□□□ -2.01
VPS45-206ENST00000472756 MUM1Q2TAK8 710 aa2.52□□□□□ -2.01
VPS45-206ENST00000472756 PTPN20Q4JDL3 420 aa2.52□□□□□ -2.01
VPS45-206ENST00000472756 ZNF618Q5T7W0 954 aa2.52□□□□□ -2.01
VPS45-206ENST00000472756 RNF187Q5TA31 235 aaPredicted RBP2.52□□□□□ -2.01
VPS45-206ENST00000472756 PLEKHA7Q6IQ23 1121 aa2.52□□□□□ -2.01
VPS45-206ENST00000472756 KIAA1161Q6NSJ0 714 aa2.52□□□□□ -2.01
VPS45-206ENST00000472756 SLC18B1Q6NT16 456 aa2.52□□□□□ -2.01
VPS45-206ENST00000472756 TTC27Q6P3X3 843 aa2.52□□□□□ -2.01
VPS45-206ENST00000472756 TMEM270Q6UE05 265 aa2.52□□□□□ -2.01
VPS45-206ENST00000472756 ZDHHC24Q6UX98 284 aa2.52□□□□□ -2.01
VPS45-206ENST00000472756 CD300LGQ6UXG3 332 aa2.52□□□□□ -2.01
VPS45-206ENST00000472756 MMS22LQ6ZRQ5 1243 aa2.52□□□□□ -2.01
VPS45-206ENST00000472756 FAM228AQ86W67 206 aa2.52□□□□□ -2.01
VPS45-206ENST00000472756 DDX42Q86XP3 938 aaKnown RBP eCLIP2.52□□□□□ -2.01
VPS45-206ENST00000472756 PHF13Q86YI8 300 aaPredicted RBP2.52□□□□□ -2.01
VPS45-206ENST00000472756 WDR49Q8IV35 697 aa2.52□□□□□ -2.01
VPS45-206ENST00000472756 ZBTB8OSQ8IWT0 167 aa2.52□□□□□ -2.01
VPS45-206ENST00000472756 PQLC1Q8N2U9 271 aa2.52□□□□□ -2.01
VPS45-206ENST00000472756 FITM2Q8N6M3 262 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms