RNA–Protein interactions for RNA: ENST00000472577.1

PKD1-208, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 1,140 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-208ENST00000472577 TRAFD1O14545 582 aaPredicted RBP17.35■□□□□ 0.37
PKD1-208ENST00000472577 SPINT1O43278 529 aa17.35■□□□□ 0.37
PKD1-208ENST00000472577 TIMP2P16035 220 aa17.35■□□□□ 0.37
PKD1-208ENST00000472577 SIM1P81133 766 aaPredicted RBP17.35■□□□□ 0.37
PKD1-208ENST00000472577 TRAF2Q12933 501 aa17.35■□□□□ 0.37
PKD1-208ENST00000472577 TEX44Q53QW1 395 aa17.35■□□□□ 0.37
PKD1-208ENST00000472577 LRRC73Q5JTD7 316 aa17.35■□□□□ 0.37
PKD1-208ENST00000472577 CDKL3Q8IVW4 592 aaPredicted RBP17.35■□□□□ 0.37
PKD1-208ENST00000472577 TTC13Q8NBP0 860 aa17.35■□□□□ 0.37
PKD1-208ENST00000472577 HTR3CQ8WXA8 447 aa17.35■□□□□ 0.37
PKD1-208ENST00000472577 ECHDC3Q96DC8 303 aa17.35■□□□□ 0.37
PKD1-208ENST00000472577 GTPBP2Q9BX10 602 aaKnown RBP17.35■□□□□ 0.37
PKD1-208ENST00000472577 PCED1AQ9H1Q7 454 aa17.35■□□□□ 0.37
PKD1-208ENST00000472577 CAPN10Q9HC96 672 aa17.35■□□□□ 0.37
PKD1-208ENST00000472577 FADS3Q9Y5Q0 445 aa17.35■□□□□ 0.37
PKD1-208ENST00000472577 BAHCC1Q9P281 2608 aa17.34■□□□□ 0.37
PKD1-208ENST00000472577 DMXL2Q8TDJ6 3036 aa17.34■□□□□ 0.37
PKD1-208ENST00000472577 TBC1D3DA0A087WVF3 549 aa17.34■□□□□ 0.37
PKD1-208ENST00000472577 TBC1D3IA0A087WXS9 549 aa17.34■□□□□ 0.37
PKD1-208ENST00000472577 TBC1D3EA0A087X179 549 aa17.34■□□□□ 0.37
PKD1-208ENST00000472577 TBC1D3KA0A087X1G2 549 aa17.34■□□□□ 0.37
PKD1-208ENST00000472577 TBC1D3FA6NER0 549 aaPredicted RBP17.34■□□□□ 0.37
PKD1-208ENST00000472577 LRRC72A6NJI9 287 aa17.34■□□□□ 0.37
PKD1-208ENST00000472577 TBC1D3LB9A6J9 549 aa17.34■□□□□ 0.37
PKD1-208ENST00000472577 MTSS1O43312 755 aa17.34■□□□□ 0.37
PKD1-208ENST00000472577 HTRA2O43464 458 aaPredicted RBP17.34■□□□□ 0.37
PKD1-208ENST00000472577 CEP104O60308 925 aa17.34■□□□□ 0.37
PKD1-208ENST00000472577 FSBPO95073 299 aa17.34■□□□□ 0.37
PKD1-208ENST00000472577 IGHV4-34P06331 123 aa17.34■□□□□ 0.37
PKD1-208ENST00000472577 MMP2P08253 660 aa17.34■□□□□ 0.37
PKD1-208ENST00000472577 TBC1D3HP0C7X1 549 aa17.34■□□□□ 0.37
PKD1-208ENST00000472577 ITIH2P19823 946 aa17.34■□□□□ 0.37
PKD1-208ENST00000472577 MSNP26038 577 aaKnown RBP17.34■□□□□ 0.37
PKD1-208ENST00000472577 GNG11P61952 73 aa17.34■□□□□ 0.37
PKD1-208ENST00000472577 PPP2CBP62714 309 aa17.34■□□□□ 0.37
PKD1-208ENST00000472577 PPP2CAP67775 309 aa17.34■□□□□ 0.37
PKD1-208ENST00000472577 CCDC15Q0P6D6 951 aa17.34■□□□□ 0.37
PKD1-208ENST00000472577 SIX1Q15475 284 aaPredicted RBP17.34■□□□□ 0.37
PKD1-208ENST00000472577 KIAA0895LQ68EN5 471 aa17.34■□□□□ 0.37
PKD1-208ENST00000472577 TBC1D3GQ6DHY5 549 aa17.34■□□□□ 0.37
PKD1-208ENST00000472577 TBC1D3CQ6IPX1 549 aa17.34■□□□□ 0.37
PKD1-208ENST00000472577 DARS2Q6PI48 645 aaKnown RBP17.34■□□□□ 0.37
PKD1-208ENST00000472577 TTC7BQ86TV6 843 aa17.34■□□□□ 0.37
PKD1-208ENST00000472577 TBC1D3Q8IZP1 549 aaPredicted RBP17.34■□□□□ 0.37
PKD1-208ENST00000472577 ZNF567Q8N184 647 aa17.34■□□□□ 0.37
PKD1-208ENST00000472577 SLC35B2Q8TB61 432 aa17.34■□□□□ 0.37
PKD1-208ENST00000472577 HCAR2Q8TDS4 363 aa17.34■□□□□ 0.37
PKD1-208ENST00000472577 ATG4AQ8WYN0 398 aa17.34■□□□□ 0.37
PKD1-208ENST00000472577 FOXJ1Q92949 421 aa17.34■□□□□ 0.37
PKD1-208ENST00000472577 BIRC7Q96CA5 298 aa17.34■□□□□ 0.37
PKD1-208ENST00000472577 TEKT5Q96M29 485 aa17.34■□□□□ 0.37
PKD1-208ENST00000472577 WDR24Q96S15 920 aa17.34■□□□□ 0.37
PKD1-208ENST00000472577 KDM4CQ9H3R0 1056 aa17.34■□□□□ 0.37
PKD1-208ENST00000472577 HAUS2Q9NVX0 235 aa17.34■□□□□ 0.37
PKD1-208ENST00000472577 GGT7Q9UJ14 662 aa17.34■□□□□ 0.37
PKD1-208ENST00000472577 ITM2BQ9Y287 266 aa17.34■□□□□ 0.37
PKD1-208ENST00000472577 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.34■□□□□ 0.37
PKD1-208ENST00000472577 ATRXP46100 2492 aa17.33■□□□□ 0.37
PKD1-208ENST00000472577 TMEM8BA6NDV4 472 aa17.33■□□□□ 0.36
PKD1-208ENST00000472577 MEI4A8MW99 385 aa17.33■□□□□ 0.36
PKD1-208ENST00000472577 AREL1O15033 823 aa17.33■□□□□ 0.36
PKD1-208ENST00000472577 AP1G1O43747 822 aa17.33■□□□□ 0.36
PKD1-208ENST00000472577 SOCS5O75159 536 aa17.33■□□□□ 0.36
PKD1-208ENST00000472577 FGGP02679 453 aa17.33■□□□□ 0.36
PKD1-208ENST00000472577 CES1P23141 567 aa17.33■□□□□ 0.36
PKD1-208ENST00000472577 MAOBP27338 520 aa17.33■□□□□ 0.36
PKD1-208ENST00000472577 CD68P34810 354 aaPredicted RBP17.33■□□□□ 0.36
PKD1-208ENST00000472577 HOXD12P35452 270 aa17.33■□□□□ 0.36
PKD1-208ENST00000472577 CFAP58Q5T655 872 aa17.33■□□□□ 0.36
PKD1-208ENST00000472577 BRAT1Q6PJG6 821 aa17.33■□□□□ 0.36
PKD1-208ENST00000472577 MINDY1Q8N5J2 469 aa17.33■□□□□ 0.36
PKD1-208ENST00000472577 RAB7BQ96AH8 199 aa17.33■□□□□ 0.36
PKD1-208ENST00000472577 SLC32A1Q9H598 525 aa17.33■□□□□ 0.36
PKD1-208ENST00000472577 USP29Q9HBJ7 922 aa17.33■□□□□ 0.36
PKD1-208ENST00000472577 GLOD4Q9HC38 313 aa17.33■□□□□ 0.36
PKD1-208ENST00000472577 PREBQ9HCU5 417 aa17.33■□□□□ 0.36
PKD1-208ENST00000472577 DNPEPQ9ULA0 475 aa17.33■□□□□ 0.36
PKD1-208ENST00000472577 SLC6A14Q9UN76 642 aa17.33■□□□□ 0.36
PKD1-208ENST00000472577 NEUROG3Q9Y4Z2 214 aa17.33■□□□□ 0.36
PKD1-208ENST00000472577 RAI2Q9Y5P3 530 aa17.33■□□□□ 0.36
PKD1-208ENST00000472577 PCNX2A6NKB5 2137 aa17.33■□□□□ 0.36
PKD1-208ENST00000472577 FREM2Q5SZK8 3169 aa17.32■□□□□ 0.36
PKD1-208ENST00000472577 UPK3BL1B0FP48 263 aa17.32■□□□□ 0.36
PKD1-208ENST00000472577 UPK3BL2E5RIL1 263 aa17.32■□□□□ 0.36
PKD1-208ENST00000472577 KCNN4O15554 427 aa17.32■□□□□ 0.36
PKD1-208ENST00000472577 RNGTTO60942 597 aaKnown RBP17.32■□□□□ 0.36
PKD1-208ENST00000472577 PRKCGP05129 697 aa17.32■□□□□ 0.36
PKD1-208ENST00000472577 SERPINF2P08697 491 aa17.32■□□□□ 0.36
PKD1-208ENST00000472577 CD86P42081 329 aa17.32■□□□□ 0.36
PKD1-208ENST00000472577 SKOR1P84550 965 aa17.32■□□□□ 0.36
PKD1-208ENST00000472577 COL9A2Q14055 689 aaPredicted RBP17.32■□□□□ 0.36
PKD1-208ENST00000472577 UGP2Q16851 508 aa17.32■□□□□ 0.36
PKD1-208ENST00000472577 DUOXA1Q1HG43 343 aa17.32■□□□□ 0.36
PKD1-208ENST00000472577 PRPF39Q86UA1 669 aaKnown RBP17.32■□□□□ 0.36
PKD1-208ENST00000472577 RASGEF1CQ8N431 466 aa17.32■□□□□ 0.36
PKD1-208ENST00000472577 PDCD6IPQ8WUM4 868 aaKnown RBP17.32■□□□□ 0.36
PKD1-208ENST00000472577 C1orf54Q8WWF1 131 aa17.32■□□□□ 0.36
PKD1-208ENST00000472577 DNASE2BQ8WZ79 361 aa17.32■□□□□ 0.36
PKD1-208ENST00000472577 SNX19Q92543 992 aa17.32■□□□□ 0.36
PKD1-208ENST00000472577 SPOCK2Q92563 424 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms