RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 GLMNQ92990 594 aa22.72■■□□□ 1.23
C9orf3-213ENST00000471978 BOCQ9BWV1 1114 aa22.72■■□□□ 1.23
C9orf3-213ENST00000471978 MRPL47Q9HD33 250 aaKnown RBP22.72■■□□□ 1.23
C9orf3-213ENST00000471978 CWC15Q9P013 229 aaKnown RBP22.72■■□□□ 1.23
C9orf3-213ENST00000471978 ATP8A1Q9Y2Q0 1164 aa22.72■■□□□ 1.23
C9orf3-213ENST00000471978 BPTFQ12830 3046 aa22.71■■□□□ 1.23
C9orf3-213ENST00000471978 EME2A4GXA9 379 aaPredicted RBP22.71■■□□□ 1.23
C9orf3-213ENST00000471978 TMEM110-MUSTN1A8MSY1 372 aa22.71■■□□□ 1.23
C9orf3-213ENST00000471978 LZTS3O60299 673 aaPredicted RBP22.71■■□□□ 1.23
C9orf3-213ENST00000471978 USP12O75317 370 aa22.71■■□□□ 1.23
C9orf3-213ENST00000471978 PRKCGP05129 697 aa22.71■■□□□ 1.23
C9orf3-213ENST00000471978 ANXA6P08133 673 aa22.71■■□□□ 1.23
C9orf3-213ENST00000471978 TSHRP16473 764 aa22.71■■□□□ 1.23
C9orf3-213ENST00000471978 TGM2P21980 687 aa22.71■■□□□ 1.23
C9orf3-213ENST00000471978 MMP12P39900 470 aa22.71■■□□□ 1.23
C9orf3-213ENST00000471978 PEX5P50542 639 aa22.71■■□□□ 1.23
C9orf3-213ENST00000471978 IL10RBQ08334 325 aa22.71■■□□□ 1.23
C9orf3-213ENST00000471978 RFTN1Q14699 578 aaPredicted RBP22.71■■□□□ 1.23
C9orf3-213ENST00000471978 IQCB1Q15051 598 aa22.71■■□□□ 1.23
C9orf3-213ENST00000471978 TBC1D25Q3MII6 688 aa22.71■■□□□ 1.23
C9orf3-213ENST00000471978 CLPBQ9H078 707 aa22.71■■□□□ 1.23
C9orf3-213ENST00000471978 ZWILCHQ9H900 591 aa22.71■■□□□ 1.23
C9orf3-213ENST00000471978 MUSKO15146 869 aa22.7■■□□□ 1.22
C9orf3-213ENST00000471978 YY2O15391 372 aa22.7■■□□□ 1.22
C9orf3-213ENST00000471978 MPOP05164 745 aa22.7■■□□□ 1.22
C9orf3-213ENST00000471978 RPIAP49247 311 aa22.7■■□□□ 1.22
C9orf3-213ENST00000471978 BLKP51451 505 aa22.7■■□□□ 1.22
C9orf3-213ENST00000471978 BCL2L1Q07817 233 aa22.7■■□□□ 1.22
C9orf3-213ENST00000471978 NSUN2Q08J23 767 aaKnown RBP eCLIP22.7■■□□□ 1.22
C9orf3-213ENST00000471978 DPYSQ14117 519 aa22.7■■□□□ 1.22
C9orf3-213ENST00000471978 INPP5AQ14642 412 aa22.7■■□□□ 1.22
C9orf3-213ENST00000471978 C6orf132Q5T0Z8 1188 aa22.7■■□□□ 1.22
C9orf3-213ENST00000471978 HID1Q8IV36 788 aa22.7■■□□□ 1.22
C9orf3-213ENST00000471978 ISCUQ9H1K1 167 aa22.7■■□□□ 1.22
C9orf3-213ENST00000471978 BAHCC1Q9P281 2608 aa22.69■■□□□ 1.22
C9orf3-213ENST00000471978 HTR1BP28222 390 aa22.69■■□□□ 1.22
C9orf3-213ENST00000471978 PCK1P35558 622 aa22.69■■□□□ 1.22
C9orf3-213ENST00000471978 HK3P52790 923 aa22.69■■□□□ 1.22
C9orf3-213ENST00000471978 GABREP78334 506 aa22.69■■□□□ 1.22
C9orf3-213ENST00000471978 NFATC4Q14934 902 aa22.69■■□□□ 1.22
C9orf3-213ENST00000471978 ACAP1Q15027 740 aa22.69■■□□□ 1.22
C9orf3-213ENST00000471978 AGERQ15109 404 aa22.69■■□□□ 1.22
C9orf3-213ENST00000471978 FIGNQ5HY92 759 aa22.69■■□□□ 1.22
C9orf3-213ENST00000471978 ENPP7Q6UWV6 458 aa22.69■■□□□ 1.22
C9orf3-213ENST00000471978 SLC35F3Q8IY50 421 aa22.69■■□□□ 1.22
C9orf3-213ENST00000471978 FSTL5Q8N475 847 aaPredicted RBP22.69■■□□□ 1.22
C9orf3-213ENST00000471978 LZTR1Q8N653 840 aa22.69■■□□□ 1.22
C9orf3-213ENST00000471978 PAF1Q8N7H5 531 aa22.69■■□□□ 1.22
C9orf3-213ENST00000471978 TSACCQ96A04 125 aaPredicted RBP22.69■■□□□ 1.22
C9orf3-213ENST00000471978 FUCA2Q9BTY2 467 aa22.69■■□□□ 1.22
C9orf3-213ENST00000471978 APOOQ9BUR5 198 aa22.69■■□□□ 1.22
C9orf3-213ENST00000471978 DOLKQ9UPQ8 538 aa22.69■■□□□ 1.22
C9orf3-213ENST00000471978 OR1A2Q9Y585 309 aa22.69■■□□□ 1.22
C9orf3-213ENST00000471978 LRRK1Q38SD2 2015 aa22.69■■□□□ 1.22
C9orf3-213ENST00000471978 ASXL3Q9C0F0 2248 aa22.68■■□□□ 1.22
C9orf3-213ENST00000471978 H3BRJ5 948 aa22.68■■□□□ 1.22
C9orf3-213ENST00000471978 PCCBP05166 539 aa22.68■■□□□ 1.22
C9orf3-213ENST00000471978 CELA2BP08218 269 aaPredicted RBP22.68■■□□□ 1.22
C9orf3-213ENST00000471978 CTSEP14091 401 aa22.68■■□□□ 1.22
C9orf3-213ENST00000471978 IL1R2P27930 398 aa22.68■■□□□ 1.22
C9orf3-213ENST00000471978 SCNN1BP51168 640 aa22.68■■□□□ 1.22
C9orf3-213ENST00000471978 POLR2LP62875 67 aaKnown RBP22.68■■□□□ 1.22
C9orf3-213ENST00000471978 ELOCQ15369 112 aa22.68■■□□□ 1.22
C9orf3-213ENST00000471978 ISXQ2M1V0 245 aa22.68■■□□□ 1.22
C9orf3-213ENST00000471978 ALG11Q2TAA5 492 aa22.68■■□□□ 1.22
C9orf3-213ENST00000471978 SMTNL2Q2TAL5 461 aa22.68■■□□□ 1.22
C9orf3-213ENST00000471978 TDRD12Q587J7 1177 aaKnown RBP22.68■■□□□ 1.22
C9orf3-213ENST00000471978 PERM1Q5SV97 790 aa22.68■■□□□ 1.22
C9orf3-213ENST00000471978 ESRP1Q6NXG1 681 aaKnown RBP22.68■■□□□ 1.22
C9orf3-213ENST00000471978 CRTC1Q6UUV9 634 aa22.68■■□□□ 1.22
C9orf3-213ENST00000471978 RD3Q7Z3Z2 195 aa22.68■■□□□ 1.22
C9orf3-213ENST00000471978 TP53INP2Q8IXH6 220 aa22.68■■□□□ 1.22
C9orf3-213ENST00000471978 TPCN2Q8NHX9 752 aa22.68■■□□□ 1.22
C9orf3-213ENST00000471978 ECHDC3Q96DC8 303 aa22.68■■□□□ 1.22
C9orf3-213ENST00000471978 PSKH2Q96QS6 385 aa22.68■■□□□ 1.22
C9orf3-213ENST00000471978 SEPT3Q9UH03 358 aa22.68■■□□□ 1.22
C9orf3-213ENST00000471978 CFAP69A5D8W1 941 aa22.67■■□□□ 1.22
C9orf3-213ENST00000471978 RASGRP1O95267 797 aa22.67■■□□□ 1.22
C9orf3-213ENST00000471978 TCF4P15884 667 aa22.67■■□□□ 1.22
C9orf3-213ENST00000471978 ARL4AP40617 200 aa22.67■■□□□ 1.22
C9orf3-213ENST00000471978 LSSP48449 732 aa22.67■■□□□ 1.22
C9orf3-213ENST00000471978 RENBPP51606 427 aa22.67■■□□□ 1.22
C9orf3-213ENST00000471978 SRP54P61011 504 aaKnown RBP22.67■■□□□ 1.22
C9orf3-213ENST00000471978 CCDC173Q0VFZ6 552 aa22.67■■□□□ 1.22
C9orf3-213ENST00000471978 MTM1Q13496 603 aa22.67■■□□□ 1.22
C9orf3-213ENST00000471978 LBRQ14739 615 aaKnown RBP22.67■■□□□ 1.22
C9orf3-213ENST00000471978 TCEA2Q15560 299 aa22.67■■□□□ 1.22
C9orf3-213ENST00000471978 DPYSL2Q16555 572 aa22.67■■□□□ 1.22
C9orf3-213ENST00000471978 BOLA3Q53S33 107 aa22.67■■□□□ 1.22
C9orf3-213ENST00000471978 TMCO4Q5TGY1 634 aa22.67■■□□□ 1.22
C9orf3-213ENST00000471978 LSMEM2Q8N112 164 aa22.67■■□□□ 1.22
C9orf3-213ENST00000471978 ATL2Q8NHH9 583 aa22.67■■□□□ 1.22
C9orf3-213ENST00000471978 SCG3Q8WXD2 468 aaKnown RBP22.67■■□□□ 1.22
C9orf3-213ENST00000471978 HSPH1Q92598 858 aa22.67■■□□□ 1.22
C9orf3-213ENST00000471978 NAT6Q93015 286 aa22.67■■□□□ 1.22
C9orf3-213ENST00000471978 ZNF578Q96N58 590 aaPredicted RBP22.67■■□□□ 1.22
C9orf3-213ENST00000471978 ZNF599Q96NL3 588 aa22.67■■□□□ 1.22
C9orf3-213ENST00000471978 BBC3Q96PG8 261 aaPredicted RBP22.67■■□□□ 1.22
C9orf3-213ENST00000471978 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.67■■□□□ 1.224e-6■■■□□ 18.4
C9orf3-213ENST00000471978 POLR1BQ9H9Y6 1135 aa22.67■■□□□ 1.22
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