RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 GPR161Q8N6U8 529 aaKnown RBP9.95□□□□□ -0.82
SF3A1-207ENST00000471342 IPMKQ8NFU5 416 aa9.95□□□□□ -0.82
SF3A1-207ENST00000471342 OR13J1Q8NGT2 312 aa9.95□□□□□ -0.82
SF3A1-207ENST00000471342 OR2T3Q8NH03 318 aa9.95□□□□□ -0.82
SF3A1-207ENST00000471342 HCAR2Q8TDS4 363 aa9.95□□□□□ -0.82
SF3A1-207ENST00000471342 NELL1Q92832 810 aa9.95□□□□□ -0.82
SF3A1-207ENST00000471342 SCRN2Q96FV2 425 aa9.95□□□□□ -0.82
SF3A1-207ENST00000471342 LRIG1Q96JA1 1093 aa9.95□□□□□ -0.82
SF3A1-207ENST00000471342 TBL1YQ9BQ87 522 aa9.95□□□□□ -0.82
SF3A1-207ENST00000471342 MCMBPQ9BTE3 642 aa9.95□□□□□ -0.82
SF3A1-207ENST00000471342 KIFC1Q9BW19 673 aa9.95□□□□□ -0.82
SF3A1-207ENST00000471342 HDAC8Q9BY41 377 aa9.95□□□□□ -0.82
SF3A1-207ENST00000471342 FUT8Q9BYC5 575 aa9.95□□□□□ -0.82
SF3A1-207ENST00000471342 SMYD2Q9NRG4 433 aa9.95□□□□□ -0.82
SF3A1-207ENST00000471342 TREX1Q9NSU2 369 aa9.95□□□□□ -0.82
SF3A1-207ENST00000471342 SYBUQ9NX95 663 aa9.95□□□□□ -0.82
SF3A1-207ENST00000471342 USP36Q9P275 1121 aaKnown RBP9.95□□□□□ -0.82
SF3A1-207ENST00000471342 SLC2A6Q9UGQ3 507 aa9.95□□□□□ -0.82
SF3A1-207ENST00000471342 SUN2Q9UH99 717 aa9.95□□□□□ -0.82
SF3A1-207ENST00000471342 IL36AQ9UHA7 158 aa9.95□□□□□ -0.82
SF3A1-207ENST00000471342 ASIC3Q9UHC3 531 aa9.95□□□□□ -0.82
SF3A1-207ENST00000471342 AAR2Q9Y312 384 aaKnown RBP9.95□□□□□ -0.82
SF3A1-207ENST00000471342 PCDHB9Q9Y5E1 797 aa9.95□□□□□ -0.82
SF3A1-207ENST00000471342 FADS3Q9Y5Q0 445 aa9.95□□□□□ -0.82
SF3A1-207ENST00000471342 NPIPB15A6NHN6 443 aaPredicted RBP9.94□□□□□ -0.82
SF3A1-207ENST00000471342 C16orf96A6NNT2 1141 aa9.94□□□□□ -0.82
SF3A1-207ENST00000471342 ERI2A8K979 691 aaKnown RBP9.94□□□□□ -0.82
SF3A1-207ENST00000471342 PPFIA2O75334 1257 aa9.94□□□□□ -0.82
SF3A1-207ENST00000471342 IGSF6O95976 241 aa9.94□□□□□ -0.82
SF3A1-207ENST00000471342 SERPINF2P08697 491 aa9.94□□□□□ -0.82
SF3A1-207ENST00000471342 PIRTP0C851 137 aa9.94□□□□□ -0.82
SF3A1-207ENST00000471342 AOC1P19801 751 aa9.94□□□□□ -0.82
SF3A1-207ENST00000471342 ITGB7P26010 798 aa9.94□□□□□ -0.82
SF3A1-207ENST00000471342 ZNF140P52738 457 aaPredicted RBP9.94□□□□□ -0.82
SF3A1-207ENST00000471342 BASP1P80723 227 aaKnown RBP9.94□□□□□ -0.82
SF3A1-207ENST00000471342 XIAPP98170 497 aa9.94□□□□□ -0.82
SF3A1-207ENST00000471342 CNTN1Q12860 1018 aa9.94□□□□□ -0.82
SF3A1-207ENST00000471342 CST6Q15828 149 aa9.94□□□□□ -0.82
SF3A1-207ENST00000471342 PCSK7Q16549 785 aa9.94□□□□□ -0.82
SF3A1-207ENST00000471342 UGP2Q16851 508 aa9.94□□□□□ -0.82
SF3A1-207ENST00000471342 POM121L1PQ3SYA9 428 aa9.94□□□□□ -0.82
SF3A1-207ENST00000471342 ACCSLQ4AC99 568 aa9.94□□□□□ -0.82
SF3A1-207ENST00000471342 PREPLQ4J6C6 727 aaPredicted RBP9.94□□□□□ -0.82
SF3A1-207ENST00000471342 LRRC73Q5JTD7 316 aa9.94□□□□□ -0.82
SF3A1-207ENST00000471342 BEND6Q5SZJ8 279 aaPredicted RBP9.94□□□□□ -0.82
SF3A1-207ENST00000471342 STEAP4Q687X5 459 aa9.94□□□□□ -0.82
SF3A1-207ENST00000471342 BMP8AQ7Z5Y6 402 aa9.94□□□□□ -0.82
SF3A1-207ENST00000471342 TECPR1Q7Z6L1 1165 aa9.94□□□□□ -0.82
SF3A1-207ENST00000471342 TMPRSS6Q8IU80 811 aa9.94□□□□□ -0.82
SF3A1-207ENST00000471342 MMAAQ8IVH4 418 aaKnown RBP9.94□□□□□ -0.82
SF3A1-207ENST00000471342 SPNS2Q8IVW8 549 aa9.94□□□□□ -0.82
SF3A1-207ENST00000471342 UNC5BQ8IZJ1 945 aa9.94□□□□□ -0.82
SF3A1-207ENST00000471342 GRIN3AQ8TCU5 1115 aa9.94□□□□□ -0.82
SF3A1-207ENST00000471342 CCHCR1Q8TD31 782 aa9.94□□□□□ -0.82
SF3A1-207ENST00000471342 RUBCNQ92622 972 aa9.94□□□□□ -0.82
SF3A1-207ENST00000471342 LRRC45Q96CN5 670 aa9.94□□□□□ -0.82
SF3A1-207ENST00000471342 RANBP9Q96S59 729 aa9.94□□□□□ -0.82
SF3A1-207ENST00000471342 NELL2Q99435 816 aa9.94□□□□□ -0.82
SF3A1-207ENST00000471342 PHACTR1Q9C0D0 580 aa9.94□□□□□ -0.82
SF3A1-207ENST00000471342 SEMA4AQ9H3S1 761 aa9.94□□□□□ -0.82
SF3A1-207ENST00000471342 LRRC40Q9H9A6 602 aa9.94□□□□□ -0.82
SF3A1-207ENST00000471342 EBF2Q9HAK2 575 aa9.94□□□□□ -0.82
SF3A1-207ENST00000471342 PCDH12Q9NPG4 1184 aa9.94□□□□□ -0.82
SF3A1-207ENST00000471342 ITM2CQ9NQX7 267 aa9.94□□□□□ -0.82
SF3A1-207ENST00000471342 MOCS1Q9NZB8 636 aa9.94□□□□□ -0.82
SF3A1-207ENST00000471342 B4GALT6Q9UBX8 382 aa9.94□□□□□ -0.82
SF3A1-207ENST00000471342 ANAPC5Q9UJX4 755 aa9.94□□□□□ -0.82
SF3A1-207ENST00000471342 ZFR2Q9UPR6 939 aaKnown RBP9.94□□□□□ -0.82
SF3A1-207ENST00000471342 ITM2BQ9Y287 266 aa9.94□□□□□ -0.82
SF3A1-207ENST00000471342 UTP11Q9Y3A2 253 aaKnown RBP9.94□□□□□ -0.82
SF3A1-207ENST00000471342 ARIH1Q9Y4X5 557 aaPredicted RBP9.94□□□□□ -0.82
SF3A1-207ENST00000471342 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.93□□□□□ -0.82
SF3A1-207ENST00000471342 TMEM221A6NGB7 291 aa9.93□□□□□ -0.82
SF3A1-207ENST00000471342 M0R296 226 aa9.93□□□□□ -0.82
SF3A1-207ENST00000471342 ALDH1A2O94788 518 aa9.93□□□□□ -0.82
SF3A1-207ENST00000471342 SOD1P00441 154 aa9.93□□□□□ -0.82
SF3A1-207ENST00000471342 C1SP09871 688 aa9.93□□□□□ -0.82
SF3A1-207ENST00000471342 ALADP13716 330 aa9.93□□□□□ -0.82
SF3A1-207ENST00000471342 HOXB2P14652 356 aa9.93□□□□□ -0.82
SF3A1-207ENST00000471342 CTPS1P17812 591 aa9.93□□□□□ -0.82
SF3A1-207ENST00000471342 HLA-DPA1P20036 260 aa9.93□□□□□ -0.82
SF3A1-207ENST00000471342 MGAT1P26572 445 aa9.93□□□□□ -0.82
SF3A1-207ENST00000471342 GCAP28676 217 aa9.93□□□□□ -0.82
SF3A1-207ENST00000471342 HOXA6P31267 233 aa9.93□□□□□ -0.82
SF3A1-207ENST00000471342 MMP12P39900 470 aa9.93□□□□□ -0.82
SF3A1-207ENST00000471342 RPL26P61254 145 aaKnown RBP9.93□□□□□ -0.82
SF3A1-207ENST00000471342 BCL2L1Q07817 233 aa9.93□□□□□ -0.82
SF3A1-207ENST00000471342 CUL1Q13616 776 aa9.93□□□□□ -0.82
SF3A1-207ENST00000471342 UBXN2BQ14CS0 331 aa9.93□□□□□ -0.82
SF3A1-207ENST00000471342 MAP7D1Q3KQU3 841 aa9.93□□□□□ -0.82
SF3A1-207ENST00000471342 TMEM52BQ4KMG9 183 aa9.93□□□□□ -0.82
SF3A1-207ENST00000471342 TMEM31Q5JXX7 168 aa9.93□□□□□ -0.82
SF3A1-207ENST00000471342 ESRP1Q6NXG1 681 aaKnown RBP9.93□□□□□ -0.82
SF3A1-207ENST00000471342 KDM7AQ6ZMT4 941 aa9.93□□□□□ -0.82
SF3A1-207ENST00000471342 HSD11B1LQ7Z5J1 315 aa9.93□□□□□ -0.82
SF3A1-207ENST00000471342 SPEM1Q8N4L4 309 aa9.93□□□□□ -0.82
SF3A1-207ENST00000471342 SLC25A41Q8N5S1 370 aa9.93□□□□□ -0.82
SF3A1-207ENST00000471342 UCMAQ8WVF2 138 aa9.93□□□□□ -0.82
SF3A1-207ENST00000471342 CCDC97Q96F63 343 aaPredicted RBP9.93□□□□□ -0.82
SF3A1-207ENST00000471342 COQ10AQ96MF6 247 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms