RNA–Protein interactions for RNA: ENST00000470824.1

PRPF3-204, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 898 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-204ENST00000470824 NDUFS3O75489 264 aa4.21□□□□□ -1.74
PRPF3-204ENST00000470824 GJB3O75712 270 aa4.21□□□□□ -1.74
PRPF3-204ENST00000470824 SLC25A12O75746 678 aa4.21□□□□□ -1.74
PRPF3-204ENST00000470824 BEST1O76090 585 aa4.21□□□□□ -1.74
PRPF3-204ENST00000470824 OR2C1O95371 312 aa4.21□□□□□ -1.74
PRPF3-204ENST00000470824 SLPIP03973 132 aa4.21□□□□□ -1.74
PRPF3-204ENST00000470824 PRR35P0CG20 571 aa4.21□□□□□ -1.74
PRPF3-204ENST00000470824 GCH1P30793 250 aa4.21□□□□□ -1.74
PRPF3-204ENST00000470824 ACSL1P33121 698 aa4.21□□□□□ -1.74
PRPF3-204ENST00000470824 AVPR1AP37288 418 aa4.21□□□□□ -1.74
PRPF3-204ENST00000470824 TMPRSS3P57727 454 aa4.21□□□□□ -1.74
PRPF3-204ENST00000470824 GRIK3Q13003 919 aa4.21□□□□□ -1.74
PRPF3-204ENST00000470824 STK4Q13043 487 aa4.21□□□□□ -1.74
PRPF3-204ENST00000470824 CAPSQ13938 189 aa4.21□□□□□ -1.74
PRPF3-204ENST00000470824 LPIN1Q14693 890 aa4.21□□□□□ -1.74
PRPF3-204ENST00000470824 ARHGEF6Q15052 776 aa4.21□□□□□ -1.74
PRPF3-204ENST00000470824 RAB41Q5JT25 222 aa4.21□□□□□ -1.74
PRPF3-204ENST00000470824 PRAMEF19Q5SWL8 479 aa4.21□□□□□ -1.74
PRPF3-204ENST00000470824 GLDNQ6ZMI3 551 aaPredicted RBP4.21□□□□□ -1.74
PRPF3-204ENST00000470824 YTHDF3Q7Z739 585 aaKnown RBP4.21□□□□□ -1.74
PRPF3-204ENST00000470824 RBFAQ8N0V3 343 aa4.21□□□□□ -1.74
PRPF3-204ENST00000470824 TMEM174Q8WUU8 243 aa4.21□□□□□ -1.74
PRPF3-204ENST00000470824 SNAPC3Q92966 411 aa4.21□□□□□ -1.74
PRPF3-204ENST00000470824 FBXL8Q96CD0 374 aa4.21□□□□□ -1.74
PRPF3-204ENST00000470824 ZFYVE19Q96K21 471 aa4.21□□□□□ -1.74
PRPF3-204ENST00000470824 MXD3Q9BW11 206 aa4.21□□□□□ -1.74
PRPF3-204ENST00000470824 PRSS22Q9GZN4 317 aa4.21□□□□□ -1.74
PRPF3-204ENST00000470824 LHPPQ9H008 270 aa4.21□□□□□ -1.74
PRPF3-204ENST00000470824 MAGEE1Q9HCI5 957 aa4.21□□□□□ -1.74
PRPF3-204ENST00000470824 ADARB2Q9NS39 739 aaKnown RBP4.21□□□□□ -1.74
PRPF3-204ENST00000470824 MSRB1Q9NZV6 116 aa4.21□□□□□ -1.74
PRPF3-204ENST00000470824 CNOT8Q9UFF9 292 aaKnown RBP4.21□□□□□ -1.74
PRPF3-204ENST00000470824 A3GALT2U3KPV4 340 aa4.21□□□□□ -1.74
PRPF3-204ENST00000470824 ERCC6Q03468 1493 aa4.21□□□□□ -1.74
PRPF3-204ENST00000470824 COL11A2P13942 1736 aaPredicted RBP4.21□□□□□ -1.74
PRPF3-204ENST00000470824 A0A0G2JK05 382 aa4.2□□□□□ -1.74
PRPF3-204ENST00000470824 A0A0U1RQF3 1178 aa4.2□□□□□ -1.74
PRPF3-204ENST00000470824 A0A1W2PQ09 198 aa4.2□□□□□ -1.74
PRPF3-204ENST00000470824 GAGE12JA6NER3 117 aa4.2□□□□□ -1.74
PRPF3-204ENST00000470824 A6NNC1 897 aa4.2□□□□□ -1.74
PRPF3-204ENST00000470824 KCNU1A8MYU2 1149 aa4.2□□□□□ -1.74
PRPF3-204ENST00000470824 BTBD18B2RXH4 712 aa4.2□□□□□ -1.74
PRPF3-204ENST00000470824 CNOT3O75175 753 aaKnown RBP4.2□□□□□ -1.74
PRPF3-204ENST00000470824 NKX2-2O95096 273 aa4.2□□□□□ -1.74
PRPF3-204ENST00000470824 KLKB1P03952 638 aa4.2□□□□□ -1.74
PRPF3-204ENST00000470824 RB1P06400 928 aa4.2□□□□□ -1.74
PRPF3-204ENST00000470824 CHRNB1P11230 501 aa4.2□□□□□ -1.74
PRPF3-204ENST00000470824 ETFAP13804 333 aa4.2□□□□□ -1.74
PRPF3-204ENST00000470824 ZNF182P17025 639 aaPredicted RBP4.2□□□□□ -1.74
PRPF3-204ENST00000470824 TMEM11P17152 192 aa4.2□□□□□ -1.74
PRPF3-204ENST00000470824 AGAP20933 346 aa4.2□□□□□ -1.74
PRPF3-204ENST00000470824 HOXD9P28356 352 aaPredicted RBP4.2□□□□□ -1.74
PRPF3-204ENST00000470824 SHMT1P34896 483 aa4.2□□□□□ -1.74
PRPF3-204ENST00000470824 CXCR3P49682 368 aa4.2□□□□□ -1.74
PRPF3-204ENST00000470824 CDH12P55289 794 aa4.2□□□□□ -1.74
PRPF3-204ENST00000470824 IFI35P80217 286 aaPredicted RBP4.2□□□□□ -1.74
PRPF3-204ENST00000470824 IRF3Q14653 427 aa4.2□□□□□ -1.74
PRPF3-204ENST00000470824 KRT24Q2M2I5 525 aa4.2□□□□□ -1.74
PRPF3-204ENST00000470824 SOWAHAQ2M3V2 549 aa4.2□□□□□ -1.74
PRPF3-204ENST00000470824 USP41Q3LFD5 358 aa4.2□□□□□ -1.74
PRPF3-204ENST00000470824 ZSCAN23Q3MJ62 389 aa4.2□□□□□ -1.74
PRPF3-204ENST00000470824 SUPT20HL1Q3ZLR7 823 aa4.2□□□□□ -1.74
PRPF3-204ENST00000470824 ESCO2Q56NI9 601 aa4.2□□□□□ -1.74
PRPF3-204ENST00000470824 JADE1Q6IE81 842 aa4.2□□□□□ -1.74
PRPF3-204ENST00000470824 TMEM71Q6P5X7 295 aa4.2□□□□□ -1.74
PRPF3-204ENST00000470824 LCTLQ6UWM7 567 aa4.2□□□□□ -1.74
PRPF3-204ENST00000470824 GPSM1Q86YR5 675 aa4.2□□□□□ -1.74
PRPF3-204ENST00000470824 PRSS3P2Q8NHM4 247 aa4.2□□□□□ -1.74
PRPF3-204ENST00000470824 BICD2Q8TD16 824 aa4.2□□□□□ -1.74
PRPF3-204ENST00000470824 SLC35F5Q8WV83 523 aa4.2□□□□□ -1.74
PRPF3-204ENST00000470824 TMEM18Q96B42 140 aa4.2□□□□□ -1.74
PRPF3-204ENST00000470824 ARHGEF26Q96DR7 871 aa4.2□□□□□ -1.74
PRPF3-204ENST00000470824 CCDC34Q96HJ3 373 aa4.2□□□□□ -1.74
PRPF3-204ENST00000470824 SLITRK1Q96PX8 696 aa4.2□□□□□ -1.74
PRPF3-204ENST00000470824 RANGRFQ9HD47 186 aaPredicted RBP4.2□□□□□ -1.74
PRPF3-204ENST00000470824 SUCLA2Q9P2R7 463 aaPredicted RBP4.2□□□□□ -1.74
PRPF3-204ENST00000470824 THOC2Q8NI27 1593 aaKnown RBP4.19□□□□□ -1.74
PRPF3-204ENST00000470824 ZMYM2Q9UBW7 1377 aa4.19□□□□□ -1.74
PRPF3-204ENST00000470824 FAM90A8PA6NJQ4 464 aa4.19□□□□□ -1.74
PRPF3-204ENST00000470824 ZNF814B7Z6K7 855 aa4.19□□□□□ -1.74
PRPF3-204ENST00000470824 E5RJQ4 531 aa4.19□□□□□ -1.74
PRPF3-204ENST00000470824 CHL1O00533 1208 aa4.19□□□□□ -1.74
PRPF3-204ENST00000470824 P4HA2O15460 535 aa4.19□□□□□ -1.74
PRPF3-204ENST00000470824 HCRTR2O43614 444 aa4.19□□□□□ -1.74
PRPF3-204ENST00000470824 KLK8O60259 260 aa4.19□□□□□ -1.74
PRPF3-204ENST00000470824 ZNF500O60304 480 aaPredicted RBP4.19□□□□□ -1.74
PRPF3-204ENST00000470824 ZC3H11AO75152 810 aaKnown RBP eCLIP4.19□□□□□ -1.74
PRPF3-204ENST00000470824 RBMXL2O75526 392 aaKnown RBP4.19□□□□□ -1.74
PRPF3-204ENST00000470824 CLDN7O95471 211 aa4.19□□□□□ -1.74
PRPF3-204ENST00000470824 IFNA2P01563 188 aa4.19□□□□□ -1.74
PRPF3-204ENST00000470824 MMP2P08253 660 aa4.19□□□□□ -1.74
PRPF3-204ENST00000470824 FAM90A13PP0C7W8 464 aa4.19□□□□□ -1.74
PRPF3-204ENST00000470824 FAM90A24PP0C7X0 464 aa4.19□□□□□ -1.74
PRPF3-204ENST00000470824 IL7RP16871 459 aa4.19□□□□□ -1.74
PRPF3-204ENST00000470824 SAT1P21673 171 aa4.19□□□□□ -1.74
PRPF3-204ENST00000470824 NNMTP40261 264 aa4.19□□□□□ -1.74
PRPF3-204ENST00000470824 EIF2DP41214 584 aaKnown RBP4.19□□□□□ -1.74
PRPF3-204ENST00000470824 PIK3CAP42336 1068 aa4.19□□□□□ -1.74
PRPF3-204ENST00000470824 CALD1Q05682 793 aaKnown RBP4.19□□□□□ -1.74
PRPF3-204ENST00000470824 FAM27E3Q08E93 113 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms