RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 RBM23Q86U06 439 aaKnown RBP4.05□□□□□ -1.76
BRCA2-202ENST00000470094 ESX1Q8N693 406 aa4.05□□□□□ -1.76
BRCA2-202ENST00000470094 TEX19Q8NA77 164 aa4.05□□□□□ -1.76
BRCA2-202ENST00000470094 FAM84BQ96KN1 310 aaPredicted RBP4.05□□□□□ -1.76
BRCA2-202ENST00000470094 MPHOSPH8Q99549 860 aa4.05□□□□□ -1.76
BRCA2-202ENST00000470094 VEZTQ9HBM0 779 aa4.05□□□□□ -1.76
BRCA2-202ENST00000470094 WASH6PQ9NQA3 447 aa4.05□□□□□ -1.76
BRCA2-202ENST00000470094 C20orf141Q9NUB4 165 aa4.05□□□□□ -1.76
BRCA2-202ENST00000470094 GJD2Q9UKL4 321 aa4.05□□□□□ -1.76
BRCA2-202ENST00000470094 PROCRQ9UNN8 238 aa4.05□□□□□ -1.76
BRCA2-202ENST00000470094 PCDHGB1Q9Y5G3 927 aa4.05□□□□□ -1.76
BRCA2-202ENST00000470094 BTBD18B2RXH4 712 aa4.04□□□□□ -1.76
BRCA2-202ENST00000470094 J3KR12 359 aa4.04□□□□□ -1.76
BRCA2-202ENST00000470094 ZBTB11O95625 1053 aaPredicted RBP4.04□□□□□ -1.76
BRCA2-202ENST00000470094 HEXAP06865 529 aa4.04□□□□□ -1.76
BRCA2-202ENST00000470094 IRF1P10914 325 aa4.04□□□□□ -1.76
BRCA2-202ENST00000470094 CD58P19256 250 aa4.04□□□□□ -1.76
BRCA2-202ENST00000470094 GPTP24298 496 aa4.04□□□□□ -1.76
BRCA2-202ENST00000470094 PIGAP37287 484 aa4.04□□□□□ -1.76
BRCA2-202ENST00000470094 PAFAH1B1P43034 410 aa4.04□□□□□ -1.76
BRCA2-202ENST00000470094 PEX5P50542 639 aa4.04□□□□□ -1.76
BRCA2-202ENST00000470094 TUBA1BP68363 451 aa4.04□□□□□ -1.76
BRCA2-202ENST00000470094 FOXD4Q12950 439 aaPredicted RBP4.04□□□□□ -1.76
BRCA2-202ENST00000470094 SLC39A14Q15043 492 aa4.04□□□□□ -1.76
BRCA2-202ENST00000470094 PPP2R5BQ15173 497 aa4.04□□□□□ -1.76
BRCA2-202ENST00000470094 BAK1Q16611 211 aa4.04□□□□□ -1.76
BRCA2-202ENST00000470094 HIST2H2ACQ16777 129 aaPredicted RBP4.04□□□□□ -1.76
BRCA2-202ENST00000470094 LRRC8EQ6NSJ5 796 aa4.04□□□□□ -1.76
BRCA2-202ENST00000470094 CPLX2Q6PUV4 134 aaKnown RBP4.04□□□□□ -1.76
BRCA2-202ENST00000470094 MMS22LQ6ZRQ5 1243 aa4.04□□□□□ -1.76
BRCA2-202ENST00000470094 WASF1Q92558 559 aa4.04□□□□□ -1.76
BRCA2-202ENST00000470094 SNAPC3Q92966 411 aa4.04□□□□□ -1.76
BRCA2-202ENST00000470094 ERGIC1Q969X5 290 aa4.04□□□□□ -1.76
BRCA2-202ENST00000470094 FBXL8Q96CD0 374 aa4.04□□□□□ -1.76
BRCA2-202ENST00000470094 MTBPQ96DY7 904 aa4.04□□□□□ -1.76
BRCA2-202ENST00000470094 RNF125Q96EQ8 232 aa4.04□□□□□ -1.76
BRCA2-202ENST00000470094 HEMGNQ9BXL5 484 aa4.04□□□□□ -1.76
BRCA2-202ENST00000470094 CISD1Q9NZ45 108 aaKnown RBP4.04□□□□□ -1.76
BRCA2-202ENST00000470094 C9orf78Q9NZ63 289 aaPredicted RBP4.04□□□□□ -1.76
BRCA2-202ENST00000470094 PDP2Q9P2J9 529 aa4.04□□□□□ -1.76
BRCA2-202ENST00000470094 HSPB7Q9UBY9 170 aa4.04□□□□□ -1.76
BRCA2-202ENST00000470094 FAM96BQ9Y3D0 163 aa4.04□□□□□ -1.76
BRCA2-202ENST00000470094 CNTNAP2Q9UHC6 1331 aa4.03□□□□□ -1.76
BRCA2-202ENST00000470094 PRSS44E7EML9 344 aa4.03□□□□□ -1.76
BRCA2-202ENST00000470094 WNT9BO14905 357 aa4.03□□□□□ -1.76
BRCA2-202ENST00000470094 BCAT2O15382 392 aaPredicted RBP4.03□□□□□ -1.76
BRCA2-202ENST00000470094 KLK8O60259 260 aa4.03□□□□□ -1.76
BRCA2-202ENST00000470094 MT-CYBP00156 380 aaPredicted RBP4.03□□□□□ -1.76
BRCA2-202ENST00000470094 ETFAP13804 333 aa4.03□□□□□ -1.76
BRCA2-202ENST00000470094 DAOP14920 347 aa4.03□□□□□ -1.76
BRCA2-202ENST00000470094 ARL1P40616 181 aaPredicted RBP4.03□□□□□ -1.76
BRCA2-202ENST00000470094 RRP1P56182 461 aaKnown RBP4.03□□□□□ -1.76
BRCA2-202ENST00000470094 MYBPHQ13203 477 aa4.03□□□□□ -1.76
BRCA2-202ENST00000470094 NEDD9Q14511 834 aa4.03□□□□□ -1.76
BRCA2-202ENST00000470094 XKR9Q5GH70 373 aa4.03□□□□□ -1.76
BRCA2-202ENST00000470094 C18orf65Q6ZTR6 163 aa4.03□□□□□ -1.76
BRCA2-202ENST00000470094 C16orf82Q7Z2V1 217 aa4.03□□□□□ -1.76
BRCA2-202ENST00000470094 ZC3HC1Q86WB0 502 aaKnown RBP4.03□□□□□ -1.76
BRCA2-202ENST00000470094 DCP1BQ8IZD4 617 aaKnown RBP4.03□□□□□ -1.76
BRCA2-202ENST00000470094 SCCPDHQ8NBX0 429 aa4.03□□□□□ -1.76
BRCA2-202ENST00000470094 ST8SIA4Q92187 359 aa4.03□□□□□ -1.76
BRCA2-202ENST00000470094 KLHL29Q96CT2 875 aa4.03□□□□□ -1.76
BRCA2-202ENST00000470094 KLHL15Q96M94 604 aa4.03□□□□□ -1.76
BRCA2-202ENST00000470094 OR1F2PQ96R84 312 aa4.03□□□□□ -1.76
BRCA2-202ENST00000470094 LBHD1Q9BQE6 289 aaPredicted RBP4.03□□□□□ -1.76
BRCA2-202ENST00000470094 KCND2Q9NZV8 630 aa4.03□□□□□ -1.76
BRCA2-202ENST00000470094 MPP6Q9NZW5 540 aa4.03□□□□□ -1.76
BRCA2-202ENST00000470094 ARHGAP26Q9UNA1 814 aa4.03□□□□□ -1.76
BRCA2-202ENST00000470094 CRYL1Q9Y2S2 319 aa4.03□□□□□ -1.76
BRCA2-202ENST00000470094 NFE2L3Q9Y4A8 694 aa4.03□□□□□ -1.76
BRCA2-202ENST00000470094 NFS1Q9Y697 457 aa4.03□□□□□ -1.76
BRCA2-202ENST00000470094 IGLV5-37A0A075B6J1 123 aa4.02□□□□□ -1.77
BRCA2-202ENST00000470094 hDV102S1A0JD36 115 aa4.02□□□□□ -1.77
BRCA2-202ENST00000470094 PLSCR5A0PG75 271 aa4.02□□□□□ -1.77
BRCA2-202ENST00000470094 DENND3A2RUS2 1198 aa4.02□□□□□ -1.77
BRCA2-202ENST00000470094 TTC36A6NLP5 189 aa4.02□□□□□ -1.77
BRCA2-202ENST00000470094 HSPA12AO43301 675 aa4.02□□□□□ -1.77
BRCA2-202ENST00000470094 ZIC3O60481 467 aa4.02□□□□□ -1.77
BRCA2-202ENST00000470094 PPP1R3DO95685 299 aa4.02□□□□□ -1.77
BRCA2-202ENST00000470094 TFP02787 698 aa4.02□□□□□ -1.77
BRCA2-202ENST00000470094 ITGAXP20702 1163 aa4.02□□□□□ -1.77
BRCA2-202ENST00000470094 EFNA5P52803 228 aa4.02□□□□□ -1.77
BRCA2-202ENST00000470094 GAS1P54826 345 aa4.02□□□□□ -1.77
BRCA2-202ENST00000470094 DDR1Q08345 913 aa4.02□□□□□ -1.77
BRCA2-202ENST00000470094 GRIK3Q13003 919 aa4.02□□□□□ -1.77
BRCA2-202ENST00000470094 DHX34Q14147 1143 aaKnown RBP4.02□□□□□ -1.77
BRCA2-202ENST00000470094 RNPS1Q15287 305 aaKnown RBP4.02□□□□□ -1.77
BRCA2-202ENST00000470094 CALCRLQ16602 461 aa4.02□□□□□ -1.77
BRCA2-202ENST00000470094 TCTN1Q2MV58 587 aa4.02□□□□□ -1.77
BRCA2-202ENST00000470094 KIF19Q2TAC6 998 aa4.02□□□□□ -1.77
BRCA2-202ENST00000470094 FAM69AQ5T7M9 428 aa4.02□□□□□ -1.77
BRCA2-202ENST00000470094 SLC9C2Q5TAH2 1124 aa4.02□□□□□ -1.77
BRCA2-202ENST00000470094 C9orf57Q5W0N0 161 aa4.02□□□□□ -1.77
BRCA2-202ENST00000470094 TXNDC8Q6A555 127 aa4.02□□□□□ -1.77
BRCA2-202ENST00000470094 PRSS57Q6UWY2 283 aa4.02□□□□□ -1.77
BRCA2-202ENST00000470094 ARMC9Q7Z3E5 817 aa4.02□□□□□ -1.77
BRCA2-202ENST00000470094 NOXA1Q86UR1 476 aa4.02□□□□□ -1.77
BRCA2-202ENST00000470094 HEATR4Q86WZ0 1026 aa4.02□□□□□ -1.77
BRCA2-202ENST00000470094 TDRPQ86YL5 185 aa4.02□□□□□ -1.77
BRCA2-202ENST00000470094 DHX40Q8IX18 779 aaKnown RBP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms