RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 FBXL19Q6PCT2 694 aa14.88□□□□□ -0.03
COL9A3-209ENST00000469852 BRAT1Q6PJG6 821 aa14.88□□□□□ -0.03
COL9A3-209ENST00000469852 TTC7BQ86TV6 843 aa14.88□□□□□ -0.03
COL9A3-209ENST00000469852 KBTBD6Q86V97 674 aa14.88□□□□□ -0.03
COL9A3-209ENST00000469852 JAMLQ86YT9 394 aa14.88□□□□□ -0.03
COL9A3-209ENST00000469852 DEFB119Q8N690 84 aa14.88□□□□□ -0.03
COL9A3-209ENST00000469852 PDCD7Q8N8D1 485 aaKnown RBP14.88□□□□□ -0.03
COL9A3-209ENST00000469852 ZBTB44Q8NCP5 570 aa14.88□□□□□ -0.03
COL9A3-209ENST00000469852 OR14C36Q8NHC7 312 aa14.88□□□□□ -0.03
COL9A3-209ENST00000469852 HCAR2Q8TDS4 363 aa14.88□□□□□ -0.03
COL9A3-209ENST00000469852 SPOCK2Q92563 424 aa14.88□□□□□ -0.03
COL9A3-209ENST00000469852 FICDQ9BVA6 458 aa14.88□□□□□ -0.03
COL9A3-209ENST00000469852 PCDH12Q9NPG4 1184 aa14.88□□□□□ -0.03
COL9A3-209ENST00000469852 VPS45Q9NRW7 570 aa14.88□□□□□ -0.03
COL9A3-209ENST00000469852 ZSCAN32Q9NX65 697 aa14.88□□□□□ -0.03
COL9A3-209ENST00000469852 NCKAP1Q9Y2A7 1128 aa14.88□□□□□ -0.03
COL9A3-209ENST00000469852 FADS3Q9Y5Q0 445 aa14.88□□□□□ -0.03
COL9A3-209ENST00000469852 VPS13AQ96RL7 3174 aa14.87□□□□□ -0.03
COL9A3-209ENST00000469852 LOC285095A0A1B0GVY8 99 aa14.87□□□□□ -0.03
COL9A3-209ENST00000469852 TCRBV7S3A2A0A539 114 aa14.87□□□□□ -0.03
COL9A3-209ENST00000469852 PRR23AA6NEV1 266 aa14.87□□□□□ -0.03
COL9A3-209ENST00000469852 FAM47DPA6NHR8 397 aa14.87□□□□□ -0.03
COL9A3-209ENST00000469852 A8MX80 341 aa14.87□□□□□ -0.03
COL9A3-209ENST00000469852 C10orf142B7Z368 130 aa14.87□□□□□ -0.03
COL9A3-209ENST00000469852 AREL1O15033 823 aa14.87□□□□□ -0.03
COL9A3-209ENST00000469852 RAD51CO43502 376 aa14.87□□□□□ -0.03
COL9A3-209ENST00000469852 ANXA9O76027 345 aa14.87□□□□□ -0.03
COL9A3-209ENST00000469852 PIRTP0C851 137 aa14.87□□□□□ -0.03
COL9A3-209ENST00000469852 PPP2CBP62714 309 aa14.87□□□□□ -0.03
COL9A3-209ENST00000469852 PPP2CAP67775 309 aa14.87□□□□□ -0.03
COL9A3-209ENST00000469852 DR1Q01658 176 aa14.87□□□□□ -0.03
COL9A3-209ENST00000469852 GPS1Q13098 491 aa14.87□□□□□ -0.03
COL9A3-209ENST00000469852 SEMA5AQ13591 1074 aa14.87□□□□□ -0.03
COL9A3-209ENST00000469852 PTK6Q13882 451 aa14.87□□□□□ -0.03
COL9A3-209ENST00000469852 PRPSAP1Q14558 356 aa14.87□□□□□ -0.03
COL9A3-209ENST00000469852 QPCTQ16769 361 aa14.87□□□□□ -0.03
COL9A3-209ENST00000469852 CFAP58Q5T655 872 aa14.87□□□□□ -0.03
COL9A3-209ENST00000469852 SLC25A41Q8N5S1 370 aa14.87□□□□□ -0.03
COL9A3-209ENST00000469852 PAF1Q8N7H5 531 aa14.87□□□□□ -0.03
COL9A3-209ENST00000469852 LRRN4CLQ8ND94 238 aa14.87□□□□□ -0.03
COL9A3-209ENST00000469852 GRK7Q8WTQ7 553 aa14.87□□□□□ -0.03
COL9A3-209ENST00000469852 FEM1CQ96JP0 617 aa14.87□□□□□ -0.03
COL9A3-209ENST00000469852 GPR174Q9BXC1 333 aa14.87□□□□□ -0.03
COL9A3-209ENST00000469852 FAM126AQ9BYI3 521 aaPredicted RBP14.87□□□□□ -0.03
COL9A3-209ENST00000469852 BTBD1Q9H0C5 482 aa14.87□□□□□ -0.03
COL9A3-209ENST00000469852 C6orf106Q9H6K1 298 aaPredicted RBP14.87□□□□□ -0.03
COL9A3-209ENST00000469852 B4GALT6Q9UBX8 382 aa14.87□□□□□ -0.03
COL9A3-209ENST00000469852 R4GN57 208 aa14.87□□□□□ -0.03
COL9A3-209ENST00000469852 THADAQ6YHU6 1953 aa14.86□□□□□ -0.03
COL9A3-209ENST00000469852 A0A0J9YYE9 177 aa14.86□□□□□ -0.03
COL9A3-209ENST00000469852 NPIPB15A6NHN6 443 aaPredicted RBP14.86□□□□□ -0.03
COL9A3-209ENST00000469852 RIOK3O14730 519 aaKnown RBP14.86□□□□□ -0.03
COL9A3-209ENST00000469852 SLC7A4O43246 635 aa14.86□□□□□ -0.03
COL9A3-209ENST00000469852 LILRB5O75023 590 aa14.86□□□□□ -0.03
COL9A3-209ENST00000469852 RPP40O75818 363 aaKnown RBP14.86□□□□□ -0.03
COL9A3-209ENST00000469852 SEMA4FO95754 770 aa14.86□□□□□ -0.03
COL9A3-209ENST00000469852 AP2A1O95782 977 aa14.86□□□□□ -0.03
COL9A3-209ENST00000469852 NDST3O95803 873 aa14.86□□□□□ -0.03
COL9A3-209ENST00000469852 GAS8O95995 478 aa14.86□□□□□ -0.03
COL9A3-209ENST00000469852 TRBC1P01850 177 aa14.86□□□□□ -0.03
COL9A3-209ENST00000469852 LHCGRP22888 699 aa14.86□□□□□ -0.03
COL9A3-209ENST00000469852 ACTN2P35609 894 aa14.86□□□□□ -0.03
COL9A3-209ENST00000469852 HNF1BP35680 557 aa14.86□□□□□ -0.03
COL9A3-209ENST00000469852 FDFT1P37268 417 aa14.86□□□□□ -0.03
COL9A3-209ENST00000469852 MMP12P39900 470 aa14.86□□□□□ -0.03
COL9A3-209ENST00000469852 NBL1P41271 181 aa14.86□□□□□ -0.03
COL9A3-209ENST00000469852 GRIA1P42261 906 aa14.86□□□□□ -0.03
COL9A3-209ENST00000469852 FAM193AP78312 1265 aa14.86□□□□□ -0.03
COL9A3-209ENST00000469852 BASP1P80723 227 aaKnown RBP14.86□□□□□ -0.03
COL9A3-209ENST00000469852 RALGDSQ12967 914 aa14.86□□□□□ -0.03
COL9A3-209ENST00000469852 TUBB2AQ13885 445 aa14.86□□□□□ -0.03
COL9A3-209ENST00000469852 PPP1R7Q15435 360 aa14.86□□□□□ -0.03
COL9A3-209ENST00000469852 SIRPB2Q5JXA9 342 aa14.86□□□□□ -0.03
COL9A3-209ENST00000469852 ANKRD22Q5VYY1 191 aa14.86□□□□□ -0.03
COL9A3-209ENST00000469852 DENND5AQ6IQ26 1287 aa14.86□□□□□ -0.03
COL9A3-209ENST00000469852 RANBP10Q6VN20 620 aa14.86□□□□□ -0.03
COL9A3-209ENST00000469852 ASCL5Q7RTU5 278 aa14.86□□□□□ -0.03
COL9A3-209ENST00000469852 TSPAN33Q86UF1 283 aa14.86□□□□□ -0.03
COL9A3-209ENST00000469852 NOA1Q8NC60 698 aaKnown RBP14.86□□□□□ -0.03
COL9A3-209ENST00000469852 GAB3Q8WWW8 586 aa14.86□□□□□ -0.03
COL9A3-209ENST00000469852 IFT43Q96FT9 208 aa14.86□□□□□ -0.03
COL9A3-209ENST00000469852 SPACA7Q96KW9 195 aa14.86□□□□□ -0.03
COL9A3-209ENST00000469852 MCCC1Q96RQ3 725 aaPredicted RBP14.86□□□□□ -0.03
COL9A3-209ENST00000469852 TBL1YQ9BQ87 522 aa14.86□□□□□ -0.03
COL9A3-209ENST00000469852 TUBB2BQ9BVA1 445 aa14.86□□□□□ -0.03
COL9A3-209ENST00000469852 CARD6Q9BX69 1037 aa14.86□□□□□ -0.03
COL9A3-209ENST00000469852 SGK2Q9HBY8 427 aa14.86□□□□□ -0.03
COL9A3-209ENST00000469852 PIH1D1Q9NWS0 290 aaKnown RBP14.86□□□□□ -0.03
COL9A3-209ENST00000469852 PHTF1Q9UMS5 762 aa14.86□□□□□ -0.03
COL9A3-209ENST00000469852 ZFR2Q9UPR6 939 aaKnown RBP14.86□□□□□ -0.03
COL9A3-209ENST00000469852 AAR2Q9Y312 384 aaKnown RBP14.86□□□□□ -0.03
COL9A3-209ENST00000469852 PPIL1Q9Y3C6 166 aa14.86□□□□□ -0.03
COL9A3-209ENST00000469852 SPO11Q9Y5K1 396 aa14.86□□□□□ -0.03
COL9A3-209ENST00000469852 TNRC6BQ9UPQ9 1833 aaKnown RBP14.85□□□□□ -0.03
COL9A3-209ENST00000469852 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.85□□□□□ -0.03
COL9A3-209ENST00000469852 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.85□□□□□ -0.03
COL9A3-209ENST00000469852 ANKRD66B4E2M5 251 aa14.85□□□□□ -0.03
COL9A3-209ENST00000469852 AP1G1O43747 822 aa14.85□□□□□ -0.03
COL9A3-209ENST00000469852 CA4P22748 312 aa14.85□□□□□ -0.03
COL9A3-209ENST00000469852 XPAP23025 273 aaPredicted RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms