RNA–Protein interactions for RNA: ENST00000469543.5

VIM-203, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 2,666 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-203ENST00000469543 A8MT66 165 aa19.2■□□□□ 0.66
VIM-203ENST00000469543 SP100P23497 879 aaPredicted RBP19.2■□□□□ 0.66
VIM-203ENST00000469543 CRABP2P29373 138 aa19.2■□□□□ 0.66
VIM-203ENST00000469543 PPARGP37231 505 aaPredicted RBP19.2■□□□□ 0.66
VIM-203ENST00000469543 AQP4P55087 323 aa19.2■□□□□ 0.66
VIM-203ENST00000469543 SULT2A1Q06520 285 aa19.2■□□□□ 0.66
VIM-203ENST00000469543 HECTD2Q5U5R9 776 aa19.2■□□□□ 0.66
VIM-203ENST00000469543 NADSYN1Q6IA69 706 aa19.2■□□□□ 0.66
VIM-203ENST00000469543 GK5Q6ZS86 529 aa19.2■□□□□ 0.66
VIM-203ENST00000469543 ACAD11Q709F0 780 aa19.2■□□□□ 0.66
VIM-203ENST00000469543 OR13C4Q8NGS5 318 aa19.2■□□□□ 0.66
VIM-203ENST00000469543 GATA6Q92908 595 aa19.2■□□□□ 0.66
VIM-203ENST00000469543 FAM193BQ96PV7 902 aaPredicted RBP19.2■□□□□ 0.66
VIM-203ENST00000469543 NCKIPSDQ9NZQ3 722 aa19.2■□□□□ 0.66
VIM-203ENST00000469543 LRRC14BA6NHZ5 514 aa19.2■□□□□ 0.66
VIM-203ENST00000469543 LDB2O43679 373 aa19.2■□□□□ 0.66
VIM-203ENST00000469543 VNN2O95498 520 aa19.2■□□□□ 0.66
VIM-203ENST00000469543 THRAP10827 490 aa19.2■□□□□ 0.66
VIM-203ENST00000469543 RHOQP17081 205 aa19.2■□□□□ 0.66
VIM-203ENST00000469543 YWHAQP27348 245 aa19.2■□□□□ 0.66
VIM-203ENST00000469543 POU4F1Q01851 419 aa19.2■□□□□ 0.66
VIM-203ENST00000469543 CEACAM7Q14002 265 aa19.2■□□□□ 0.66
VIM-203ENST00000469543 SEMA3AQ14563 771 aa19.2■□□□□ 0.66
VIM-203ENST00000469543 KYQ8NBH2 561 aa19.2■□□□□ 0.66
VIM-203ENST00000469543 PIDD1Q9HB75 910 aa19.2■□□□□ 0.66
VIM-203ENST00000469543 ATP13A1Q9HD20 1204 aa19.2■□□□□ 0.66
VIM-203ENST00000469543 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.2■□□□□ 0.66
VIM-203ENST00000469543 TMEM248Q9NWD8 314 aa19.2■□□□□ 0.66
VIM-203ENST00000469543 VWA7Q9Y334 891 aa19.2■□□□□ 0.66
VIM-203ENST00000469543 PCDHB5Q9Y5E4 795 aa19.2■□□□□ 0.66
VIM-203ENST00000469543 SDHDO14521 159 aa19.19■□□□□ 0.66
VIM-203ENST00000469543 RNASEH1O60930 286 aaKnown RBP19.19■□□□□ 0.66
VIM-203ENST00000469543 ZNF189O75820 626 aaPredicted RBP19.19■□□□□ 0.66
VIM-203ENST00000469543 ATXN1LP0C7T5 689 aaKnown RBP19.19■□□□□ 0.66
VIM-203ENST00000469543 COL6A2P12110 1019 aa19.19■□□□□ 0.66
VIM-203ENST00000469543 INHBEP58166 350 aa19.19■□□□□ 0.66
VIM-203ENST00000469543 PRAMEP78395 509 aa19.19■□□□□ 0.66
VIM-203ENST00000469543 MRPS35P82673 323 aaKnown RBP19.19■□□□□ 0.66
VIM-203ENST00000469543 TRIP10Q15642 601 aa19.19■□□□□ 0.66
VIM-203ENST00000469543 CMPK2Q5EBM0 449 aa19.19■□□□□ 0.66
VIM-203ENST00000469543 TECRLQ5HYJ1 363 aa19.19■□□□□ 0.66
VIM-203ENST00000469543 KBTBD6Q86V97 674 aa19.19■□□□□ 0.66
VIM-203ENST00000469543 DCP1BQ8IZD4 617 aaKnown RBP19.19■□□□□ 0.66
VIM-203ENST00000469543 PCDH20Q8N6Y1 951 aaKnown RBP19.19■□□□□ 0.66
VIM-203ENST00000469543 GDPD5Q8WTR4 605 aa19.19■□□□□ 0.66
VIM-203ENST00000469543 CLIC5Q9NZA1 410 aa19.19■□□□□ 0.66
VIM-203ENST00000469543 PTGDR2Q9Y5Y4 395 aa19.19■□□□□ 0.66
VIM-203ENST00000469543 AK5Q9Y6K8 562 aa19.19■□□□□ 0.66
VIM-203ENST00000469543 CCDC189A1A4V9 331 aa19.19■□□□□ 0.66
VIM-203ENST00000469543 FKBP6O75344 327 aa19.19■□□□□ 0.66
VIM-203ENST00000469543 H2AFYO75367 372 aaKnown RBP19.19■□□□□ 0.66
VIM-203ENST00000469543 S1PR4O95977 384 aa19.19■□□□□ 0.66
VIM-203ENST00000469543 LEPRP48357 1165 aaKnown RBP19.19■□□□□ 0.66
VIM-203ENST00000469543 MRPS22P82650 360 aaKnown RBP19.19■□□□□ 0.66
VIM-203ENST00000469543 RTP2Q5QGT7 225 aa19.19■□□□□ 0.66
VIM-203ENST00000469543 IRGCQ6NXR0 463 aa19.19■□□□□ 0.66
VIM-203ENST00000469543 HMGCLL1Q8TB92 370 aa19.19■□□□□ 0.66
VIM-203ENST00000469543 DNAJC1Q96KC8 554 aaKnown RBP19.19■□□□□ 0.66
VIM-203ENST00000469543 TUBGCP5Q96RT8 1024 aa19.19■□□□□ 0.66
VIM-203ENST00000469543 ARNT2Q9HBZ2 717 aa19.19■□□□□ 0.66
VIM-203ENST00000469543 ZBTB26Q9HCK0 441 aa19.19■□□□□ 0.66
VIM-203ENST00000469543 FBRSL1Q9HCM7 1045 aaKnown RBP19.19■□□□□ 0.66
VIM-203ENST00000469543 TCAF2A6NFQ2 919 aa19.18■□□□□ 0.66
VIM-203ENST00000469543 RAMP2O60895 175 aa19.18■□□□□ 0.66
VIM-203ENST00000469543 FAM83EQ2M2I3 478 aa19.18■□□□□ 0.66
VIM-203ENST00000469543 OR52E8Q6IFG1 317 aa19.18■□□□□ 0.66
VIM-203ENST00000469543 SDCCAG8Q86SQ7 713 aaPredicted RBP19.18■□□□□ 0.66
VIM-203ENST00000469543 OR9I1Q8NGQ6 314 aa19.18■□□□□ 0.66
VIM-203ENST00000469543 PTERQ96BW5 349 aa19.18■□□□□ 0.66
VIM-203ENST00000469543 FBXO44Q9H4M3 255 aa19.18■□□□□ 0.66
VIM-203ENST00000469543 ZNF385DQ9H6B1 395 aa19.18■□□□□ 0.66
VIM-203ENST00000469543 PCDH10Q9P2E7 1040 aa19.18■□□□□ 0.66
VIM-203ENST00000469543 GIMAP2Q9UG22 337 aa19.18■□□□□ 0.66
VIM-203ENST00000469543 FNDC3AQ9Y2H6 1198 aaKnown RBP19.18■□□□□ 0.66
VIM-203ENST00000469543 SIX3O95343 332 aaPredicted RBP19.18■□□□□ 0.66
VIM-203ENST00000469543 RPL17P18621 184 aaKnown RBP19.18■□□□□ 0.66
VIM-203ENST00000469543 PRSS55Q6UWB4 352 aaPredicted RBP19.18■□□□□ 0.66
VIM-203ENST00000469543 SPPL2BQ8TCT7 592 aa19.18■□□□□ 0.66
VIM-203ENST00000469543 SLC45A3Q96JT2 553 aa19.18■□□□□ 0.66
VIM-203ENST00000469543 CNDP1Q96KN2 507 aa19.18■□□□□ 0.66
VIM-203ENST00000469543 BTN2A3PQ96KV6 586 aa19.18■□□□□ 0.66
VIM-203ENST00000469543 UBXN10Q96LJ8 280 aa19.18■□□□□ 0.66
VIM-203ENST00000469543 C8orf48Q96LL4 319 aa19.18■□□□□ 0.66
VIM-203ENST00000469543 CCDC167Q9P0B6 97 aa19.18■□□□□ 0.66
VIM-203ENST00000469543 MID2Q9UJV3 735 aa19.18■□□□□ 0.66
VIM-203ENST00000469543 MROH6A6NGR9 719 aa19.18■□□□□ 0.66
VIM-203ENST00000469543 LIN7AO14910 233 aaPredicted RBP19.18■□□□□ 0.66
VIM-203ENST00000469543 IPO13O94829 963 aaKnown RBP19.18■□□□□ 0.66
VIM-203ENST00000469543 MYCP01106 439 aaPredicted RBP19.18■□□□□ 0.66
VIM-203ENST00000469543 ATP5F1P24539 256 aaPredicted RBP19.18■□□□□ 0.66
VIM-203ENST00000469543 NDST2P52849 883 aa19.18■□□□□ 0.66
VIM-203ENST00000469543 NFE2Q16621 373 aaPredicted RBP19.18■□□□□ 0.66
VIM-203ENST00000469543 FOXB2Q5VYV0 432 aa19.18■□□□□ 0.66
VIM-203ENST00000469543 ZNF549Q6P9A3 640 aa19.18■□□□□ 0.66
VIM-203ENST00000469543 ISCA2Q86U28 154 aa19.18■□□□□ 0.66
VIM-203ENST00000469543 PTCD2Q8WV60 388 aaKnown RBP19.18■□□□□ 0.66
VIM-203ENST00000469543 DONSONQ9NYP3 566 aa19.18■□□□□ 0.66
VIM-203ENST00000469543 C5orf42Q9H799 3197 aa19.17■□□□□ 0.66
VIM-203ENST00000469543 ENO4A6NNW6 628 aa19.17■□□□□ 0.66
VIM-203ENST00000469543 WASH4PA8MWX3 477 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms