RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 FAM69BQ5VUD6 431 aa5.51□□□□□ -1.53
XRN1-207ENST00000468894 NADSYN1Q6IA69 706 aa5.51□□□□□ -1.53
XRN1-207ENST00000468894 SHFQ7M4L6 423 aa5.51□□□□□ -1.53
XRN1-207ENST00000468894 KLHL29Q96CT2 875 aa5.51□□□□□ -1.53
XRN1-207ENST00000468894 BBS4Q96RK4 519 aa5.51□□□□□ -1.53
XRN1-207ENST00000468894 FIZ1Q96SL8 496 aa5.51□□□□□ -1.53
XRN1-207ENST00000468894 TM6SF1Q9BZW5 370 aa5.51□□□□□ -1.53
XRN1-207ENST00000468894 SMYD2Q9NRG4 433 aa5.51□□□□□ -1.53
XRN1-207ENST00000468894 OCIAD1Q9NX40 245 aa5.51□□□□□ -1.53
XRN1-207ENST00000468894 CISD1Q9NZ45 108 aaKnown RBP5.51□□□□□ -1.53
XRN1-207ENST00000468894 KCND2Q9NZV8 630 aa5.51□□□□□ -1.53
XRN1-207ENST00000468894 MPP6Q9NZW5 540 aa5.51□□□□□ -1.53
XRN1-207ENST00000468894 LRP12Q9Y561 859 aa5.51□□□□□ -1.53
XRN1-207ENST00000468894 A0A0U1RQJ8 604 aa5.5□□□□□ -1.53
XRN1-207ENST00000468894 TAF4O00268 1085 aa5.5□□□□□ -1.53
XRN1-207ENST00000468894 BCAT2O15382 392 aaPredicted RBP5.5□□□□□ -1.53
XRN1-207ENST00000468894 PPP1R3DO95685 299 aa5.5□□□□□ -1.53
XRN1-207ENST00000468894 ETFAP13804 333 aa5.5□□□□□ -1.53
XRN1-207ENST00000468894 CHATP28329 748 aa5.5□□□□□ -1.53
XRN1-207ENST00000468894 PAFAH1B1P43034 410 aa5.5□□□□□ -1.53
XRN1-207ENST00000468894 COMPP49747 757 aaPredicted RBP5.5□□□□□ -1.53
XRN1-207ENST00000468894 SEC61A1P61619 476 aaKnown RBP5.5□□□□□ -1.53
XRN1-207ENST00000468894 TDRPQ86YL5 185 aa5.5□□□□□ -1.53
XRN1-207ENST00000468894 SLC35F3Q8IY50 421 aa5.5□□□□□ -1.53
XRN1-207ENST00000468894 TCP11L2Q8N4U5 519 aa5.5□□□□□ -1.53
XRN1-207ENST00000468894 NFKBIDQ8NI38 313 aa5.5□□□□□ -1.53
XRN1-207ENST00000468894 FBXL8Q96CD0 374 aa5.5□□□□□ -1.53
XRN1-207ENST00000468894 KRTAP1-5Q9BYS1 174 aa5.5□□□□□ -1.53
XRN1-207ENST00000468894 IL25Q9H293 177 aa5.5□□□□□ -1.53
XRN1-207ENST00000468894 VEZTQ9HBM0 779 aa5.5□□□□□ -1.53
XRN1-207ENST00000468894 NFE2L3Q9Y4A8 694 aa5.5□□□□□ -1.53
XRN1-207ENST00000468894 HSPA12AO43301 675 aa5.49□□□□□ -1.53
XRN1-207ENST00000468894 NDUFB4O95168 129 aa5.49□□□□□ -1.53
XRN1-207ENST00000468894 TFP02787 698 aa5.49□□□□□ -1.53
XRN1-207ENST00000468894 HOXB6P17509 224 aaKnown RBP5.49□□□□□ -1.53
XRN1-207ENST00000468894 AGAP20933 346 aa5.49□□□□□ -1.53
XRN1-207ENST00000468894 ABCD1P33897 745 aa5.49□□□□□ -1.53
XRN1-207ENST00000468894 GRSF1Q12849 480 aaKnown RBP eCLIP5.49□□□□□ -1.53
XRN1-207ENST00000468894 NFATC4Q14934 902 aa5.49□□□□□ -1.53
XRN1-207ENST00000468894 EFNB3Q15768 340 aa5.49□□□□□ -1.53
XRN1-207ENST00000468894 ASIC2Q16515 512 aa5.49□□□□□ -1.53
XRN1-207ENST00000468894 HIST2H2ACQ16777 129 aaPredicted RBP5.49□□□□□ -1.53
XRN1-207ENST00000468894 SETMARQ53H47 684 aaPredicted RBP5.49□□□□□ -1.53
XRN1-207ENST00000468894 SGO1Q5FBB7 561 aa5.49□□□□□ -1.53
XRN1-207ENST00000468894 ACAD10Q6JQN1 1059 aa5.49□□□□□ -1.53
XRN1-207ENST00000468894 KLHL24Q6TFL4 600 aa5.49□□□□□ -1.53
XRN1-207ENST00000468894 CREB3L2Q70SY1 520 aa5.49□□□□□ -1.53
XRN1-207ENST00000468894 ZUFSPQ96AP4 578 aa5.49□□□□□ -1.53
XRN1-207ENST00000468894 LRFN5Q96NI6 719 aa5.49□□□□□ -1.53
XRN1-207ENST00000468894 NAALADL1Q9UQQ1 740 aa5.49□□□□□ -1.53
XRN1-207ENST00000468894 FAM96BQ9Y3D0 163 aa5.49□□□□□ -1.53
XRN1-207ENST00000468894 PAM16Q9Y3D7 125 aa5.49□□□□□ -1.53
XRN1-207ENST00000468894 SCINQ9Y6U3 715 aa5.49□□□□□ -1.53
XRN1-207ENST00000468894 CPED1A4D0V7 1026 aa5.48□□□□□ -1.53
XRN1-207ENST00000468894 MT-CYBP00156 380 aaPredicted RBP5.48□□□□□ -1.53
XRN1-207ENST00000468894 FGF3P11487 239 aaPredicted RBP5.48□□□□□ -1.53
XRN1-207ENST00000468894 EPHA8P29322 1005 aaPredicted RBP5.48□□□□□ -1.53
XRN1-207ENST00000468894 ART1P52961 327 aa5.48□□□□□ -1.53
XRN1-207ENST00000468894 DHX34Q14147 1143 aaKnown RBP5.48□□□□□ -1.53
XRN1-207ENST00000468894 PPP2R5BQ15173 497 aa5.48□□□□□ -1.53
XRN1-207ENST00000468894 MMEL1Q495T6 779 aa5.48□□□□□ -1.53
XRN1-207ENST00000468894 ALFQ53S48 1182 aa5.48□□□□□ -1.53
XRN1-207ENST00000468894 C9orf57Q5W0N0 161 aa5.48□□□□□ -1.53
XRN1-207ENST00000468894 ANKRD54Q6NXT1 300 aa5.48□□□□□ -1.53
XRN1-207ENST00000468894 FBXO46Q6PJ61 603 aaPredicted RBP5.48□□□□□ -1.53
XRN1-207ENST00000468894 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.48□□□□□ -1.53
XRN1-207ENST00000468894 BHLHA9Q7RTU4 235 aa5.48□□□□□ -1.53
XRN1-207ENST00000468894 TSPYL6Q8N831 410 aa5.48□□□□□ -1.53
XRN1-207ENST00000468894 PABPC5Q96DU9 382 aaKnown RBP5.48□□□□□ -1.53
XRN1-207ENST00000468894 NR1H4Q96RI1 486 aaPredicted RBP5.48□□□□□ -1.53
XRN1-207ENST00000468894 CTAGE1Q96RT6 745 aa5.48□□□□□ -1.53
XRN1-207ENST00000468894 TKTL2Q9H0I9 626 aa5.48□□□□□ -1.53
XRN1-207ENST00000468894 SLCO5A1Q9H2Y9 848 aa5.48□□□□□ -1.53
XRN1-207ENST00000468894 PLEKHA4Q9H4M7 779 aa5.48□□□□□ -1.53
XRN1-207ENST00000468894 MAGEE1Q9HCI5 957 aa5.48□□□□□ -1.53
XRN1-207ENST00000468894 A4GNTQ9UNA3 340 aa5.48□□□□□ -1.53
XRN1-207ENST00000468894 CAMK2AQ9UQM7 478 aa5.48□□□□□ -1.53
XRN1-207ENST00000468894 LSM4Q9Y4Z0 139 aaKnown RBP5.48□□□□□ -1.53
XRN1-207ENST00000468894 ZBTB11O95625 1053 aaPredicted RBP5.47□□□□□ -1.53
XRN1-207ENST00000468894 MMP2P08253 660 aa5.47□□□□□ -1.53
XRN1-207ENST00000468894 ATP1A3P13637 1013 aa5.47□□□□□ -1.53
XRN1-207ENST00000468894 SSTR2P30874 369 aa5.47□□□□□ -1.53
XRN1-207ENST00000468894 SHMT1P34896 483 aa5.47□□□□□ -1.53
XRN1-207ENST00000468894 ITGADQ13349 1161 aa5.47□□□□□ -1.53
XRN1-207ENST00000468894 TCTN1Q2MV58 587 aa5.47□□□□□ -1.53
XRN1-207ENST00000468894 HSP90AB4PQ58FF6 505 aa5.47□□□□□ -1.53
XRN1-207ENST00000468894 INTS11Q5TA45 600 aaKnown RBP5.47□□□□□ -1.53
XRN1-207ENST00000468894 HIST2H2BCQ6DN03 193 aa5.47□□□□□ -1.53
XRN1-207ENST00000468894 HIST2H2BDQ6DRA6 164 aa5.47□□□□□ -1.53
XRN1-207ENST00000468894 INO80CQ6PI98 192 aaPredicted RBP5.47□□□□□ -1.53
XRN1-207ENST00000468894 LCTLQ6UWM7 567 aa5.47□□□□□ -1.53
XRN1-207ENST00000468894 DLK2Q6UY11 383 aa5.47□□□□□ -1.53
XRN1-207ENST00000468894 MMS22LQ6ZRQ5 1243 aa5.47□□□□□ -1.53
XRN1-207ENST00000468894 MTSS1LQ765P7 747 aa5.47□□□□□ -1.53
XRN1-207ENST00000468894 ARMC9Q7Z3E5 817 aa5.47□□□□□ -1.53
XRN1-207ENST00000468894 SLC46A3Q7Z3Q1 461 aa5.47□□□□□ -1.53
XRN1-207ENST00000468894 WASF1Q92558 559 aa5.47□□□□□ -1.53
XRN1-207ENST00000468894 USP44Q9H0E7 712 aa5.47□□□□□ -1.53
XRN1-207ENST00000468894 C6orf106Q9H6K1 298 aaPredicted RBP5.47□□□□□ -1.53
XRN1-207ENST00000468894 ESRP2Q9H6T0 727 aaKnown RBP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms