RNA–Protein interactions for RNA: ENST00000468602.5

MSH5-214, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-214ENST00000468602 GDF3Q9NR23 364 aa11.35□□□□□ -0.59
MSH5-214ENST00000468602 C2orf42Q9NWW7 574 aa11.35□□□□□ -0.59
MSH5-214ENST00000468602 KCTD5Q9NXV2 234 aa11.35□□□□□ -0.59
MSH5-214ENST00000468602 GRHL1Q9NZI5 618 aa11.35□□□□□ -0.59
MSH5-214ENST00000468602 HACD3Q9P035 362 aa11.35□□□□□ -0.59
MSH5-214ENST00000468602 NFKBIL1Q9UBC1 381 aaPredicted RBP11.35□□□□□ -0.59
MSH5-214ENST00000468602 PCDHGC4Q9Y5F7 938 aa11.35□□□□□ -0.59
MSH5-214ENST00000468602 KMT2EQ8IZD2 1858 aa11.35□□□□□ -0.59
MSH5-214ENST00000468602 TCRBV21S2A2A0A5A6 115 aa11.34□□□□□ -0.59
MSH5-214ENST00000468602 UPK3BL1B0FP48 263 aa11.34□□□□□ -0.59
MSH5-214ENST00000468602 UPK3BL2E5RIL1 263 aa11.34□□□□□ -0.59
MSH5-214ENST00000468602 E7ESA3 106 aa11.34□□□□□ -0.59
MSH5-214ENST00000468602 RIOK3O14730 519 aaKnown RBP11.34□□□□□ -0.59
MSH5-214ENST00000468602 PLRG1O43660 514 aaKnown RBP11.34□□□□□ -0.59
MSH5-214ENST00000468602 GJB3O75712 270 aa11.34□□□□□ -0.59
MSH5-214ENST00000468602 DNTTP04053 509 aa11.34□□□□□ -0.59
MSH5-214ENST00000468602 UGT2B4P06133 528 aa11.34□□□□□ -0.59
MSH5-214ENST00000468602 PDHA1P08559 390 aa11.34□□□□□ -0.59
MSH5-214ENST00000468602 ADRB3P13945 408 aa11.34□□□□□ -0.59
MSH5-214ENST00000468602 ZNF30P17039 623 aa11.34□□□□□ -0.59
MSH5-214ENST00000468602 ADCY8P40145 1251 aa11.34□□□□□ -0.59
MSH5-214ENST00000468602 NEK3P51956 506 aa11.34□□□□□ -0.59
MSH5-214ENST00000468602 SARNPP82979 210 aaKnown RBP11.34□□□□□ -0.59
MSH5-214ENST00000468602 ITKQ08881 620 aa11.34□□□□□ -0.59
MSH5-214ENST00000468602 ELP6Q0PNE2 266 aa11.34□□□□□ -0.59
MSH5-214ENST00000468602 CDH17Q12864 832 aa11.34□□□□□ -0.59
MSH5-214ENST00000468602 QPCTQ16769 361 aa11.34□□□□□ -0.59
MSH5-214ENST00000468602 MAP7D1Q3KQU3 841 aa11.34□□□□□ -0.59
MSH5-214ENST00000468602 TTC31Q49AM3 519 aaPredicted RBP11.34□□□□□ -0.59
MSH5-214ENST00000468602 TMEM52BQ4KMG9 183 aa11.34□□□□□ -0.59
MSH5-214ENST00000468602 SPDYCQ5MJ68 293 aa11.34□□□□□ -0.59
MSH5-214ENST00000468602 PPP1R21Q6ZMI0 780 aa11.34□□□□□ -0.59
MSH5-214ENST00000468602 ZNF534Q76KX8 674 aa11.34□□□□□ -0.59
MSH5-214ENST00000468602 DPPA4Q7L190 304 aa11.34□□□□□ -0.59
MSH5-214ENST00000468602 PARS2Q7L3T8 475 aaKnown RBP11.34□□□□□ -0.59
MSH5-214ENST00000468602 ZSWIM9Q86XI8 627 aa11.34□□□□□ -0.59
MSH5-214ENST00000468602 RELL1Q8IUW5 271 aa11.34□□□□□ -0.59
MSH5-214ENST00000468602 MMAAQ8IVH4 418 aaKnown RBP11.34□□□□□ -0.59
MSH5-214ENST00000468602 AADATQ8N5Z0 425 aa11.34□□□□□ -0.59
MSH5-214ENST00000468602 PDCD7Q8N8D1 485 aaKnown RBP11.34□□□□□ -0.59
MSH5-214ENST00000468602 DTWD2Q8NBA8 298 aa11.34□□□□□ -0.59
MSH5-214ENST00000468602 PTCD2Q8WV60 388 aaKnown RBP11.34□□□□□ -0.59
MSH5-214ENST00000468602 ART4Q93070 314 aa11.34□□□□□ -0.59
MSH5-214ENST00000468602 ARRDC3Q96B67 414 aa11.34□□□□□ -0.59
MSH5-214ENST00000468602 KLHL32Q96NJ5 620 aa11.34□□□□□ -0.59
MSH5-214ENST00000468602 RANBP9Q96S59 729 aa11.34□□□□□ -0.59
MSH5-214ENST00000468602 TBL1YQ9BQ87 522 aa11.34□□□□□ -0.59
MSH5-214ENST00000468602 ZDHHC6Q9H6R6 413 aa11.34□□□□□ -0.59
MSH5-214ENST00000468602 ZDHHC4Q9NPG8 344 aa11.34□□□□□ -0.59
MSH5-214ENST00000468602 RRAGDQ9NQL2 400 aaPredicted RBP11.34□□□□□ -0.59
MSH5-214ENST00000468602 FAM114A2Q9NRY5 505 aa11.34□□□□□ -0.59
MSH5-214ENST00000468602 DMGDHQ9UI17 866 aaKnown RBP11.34□□□□□ -0.59
MSH5-214ENST00000468602 RGSL1A5PLK6 1076 aa11.33□□□□□ -0.6
MSH5-214ENST00000468602 CAPN8A6NHC0 703 aa11.33□□□□□ -0.6
MSH5-214ENST00000468602 STK25O00506 426 aa11.33□□□□□ -0.6
MSH5-214ENST00000468602 MID1O15344 667 aa11.33□□□□□ -0.6
MSH5-214ENST00000468602 EIF3HO15372 352 aaKnown RBP eCLIP11.33□□□□□ -0.6
MSH5-214ENST00000468602 SPINT1O43278 529 aa11.33□□□□□ -0.6
MSH5-214ENST00000468602 TSPAN6O43657 245 aa11.33□□□□□ -0.6
MSH5-214ENST00000468602 PIGNO95427 931 aa11.33□□□□□ -0.6
MSH5-214ENST00000468602 IL1BP01584 269 aa11.33□□□□□ -0.6
MSH5-214ENST00000468602 TUBBP07437 444 aa11.33□□□□□ -0.6
MSH5-214ENST00000468602 APRTP07741 180 aa11.33□□□□□ -0.6
MSH5-214ENST00000468602 CNR2P34972 360 aa11.33□□□□□ -0.6
MSH5-214ENST00000468602 NUDT1P36639 197 aa11.33□□□□□ -0.6
MSH5-214ENST00000468602 MMP12P39900 470 aa11.33□□□□□ -0.6
MSH5-214ENST00000468602 P2RY2P41231 377 aa11.33□□□□□ -0.6
MSH5-214ENST00000468602 WASP42768 502 aa11.33□□□□□ -0.6
MSH5-214ENST00000468602 RPL21P46778 160 aaKnown RBP11.33□□□□□ -0.6
MSH5-214ENST00000468602 NPY2RP49146 381 aa11.33□□□□□ -0.6
MSH5-214ENST00000468602 NUMBP49757 651 aa11.33□□□□□ -0.6
MSH5-214ENST00000468602 PTPN5P54829 565 aa11.33□□□□□ -0.6
MSH5-214ENST00000468602 CUL1Q13616 776 aa11.33□□□□□ -0.6
MSH5-214ENST00000468602 LAMB3Q13751 1172 aa11.33□□□□□ -0.6
MSH5-214ENST00000468602 CCDC70Q6NSX1 233 aa11.33□□□□□ -0.6
MSH5-214ENST00000468602 PRUNE1Q86TP1 453 aa11.33□□□□□ -0.6
MSH5-214ENST00000468602 C11orf74Q86VG3 221 aa11.33□□□□□ -0.6
MSH5-214ENST00000468602 WDR5BQ86VZ2 330 aa11.33□□□□□ -0.6
MSH5-214ENST00000468602 MDGA1Q8NFP4 955 aa11.33□□□□□ -0.6
MSH5-214ENST00000468602 LRRC39Q96DD0 335 aa11.33□□□□□ -0.6
MSH5-214ENST00000468602 SGSM3Q96HU1 749 aa11.33□□□□□ -0.6
MSH5-214ENST00000468602 TRIM51Q9BSJ1 452 aa11.33□□□□□ -0.6
MSH5-214ENST00000468602 FSD1LQ9BXM9 530 aa11.33□□□□□ -0.6
MSH5-214ENST00000468602 TSPYL1Q9H0U9 437 aa11.33□□□□□ -0.6
MSH5-214ENST00000468602 CDH19Q9H159 772 aa11.33□□□□□ -0.6
MSH5-214ENST00000468602 MRM3Q9HC36 420 aaKnown RBP11.33□□□□□ -0.6
MSH5-214ENST00000468602 PREBQ9HCU5 417 aa11.33□□□□□ -0.6
MSH5-214ENST00000468602 ZDHHC18Q9NUE0 388 aa11.33□□□□□ -0.6
MSH5-214ENST00000468602 ASIC3Q9UHC3 531 aa11.33□□□□□ -0.6
MSH5-214ENST00000468602 PCDHB9Q9Y5E1 797 aa11.33□□□□□ -0.6
MSH5-214ENST00000468602 FADS3Q9Y5Q0 445 aa11.33□□□□□ -0.6
MSH5-214ENST00000468602 CACNA1GO43497 2377 aa11.33□□□□□ -0.6
MSH5-214ENST00000468602 FANCMQ8IYD8 2048 aa11.32□□□□□ -0.6
MSH5-214ENST00000468602 MAGEB16A2A368 324 aa11.32□□□□□ -0.6
MSH5-214ENST00000468602 TTC24A2A3L6 582 aaPredicted RBP11.32□□□□□ -0.6
MSH5-214ENST00000468602 MROH6A6NGR9 719 aa11.32□□□□□ -0.6
MSH5-214ENST00000468602 KPNA3O00505 521 aaPredicted RBP11.32□□□□□ -0.6
MSH5-214ENST00000468602 PMPCBO75439 489 aa11.32□□□□□ -0.6
MSH5-214ENST00000468602 TMEM63AO94886 807 aa11.32□□□□□ -0.6
MSH5-214ENST00000468602 HEXIM1O94992 359 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms