RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 HOXC11O43248 304 aaPredicted RBP3.94□□□□□ -1.78
VPS50-209ENST00000467326 HTATSF1O43719 755 aaKnown RBP3.94□□□□□ -1.78
VPS50-209ENST00000467326 TBCAO75347 108 aaKnown RBP3.94□□□□□ -1.78
VPS50-209ENST00000467326 STARD3NLO95772 234 aa3.94□□□□□ -1.78
VPS50-209ENST00000467326 TBX18O95935 607 aa3.94□□□□□ -1.78
VPS50-209ENST00000467326 ADAP00813 363 aa3.94□□□□□ -1.78
VPS50-209ENST00000467326 IL1AP01583 271 aa3.94□□□□□ -1.78
VPS50-209ENST00000467326 DNTTP04053 509 aa3.94□□□□□ -1.78
VPS50-209ENST00000467326 POLBP06746 335 aa3.94□□□□□ -1.78
VPS50-209ENST00000467326 CNPP09543 421 aaKnown RBP3.94□□□□□ -1.78
VPS50-209ENST00000467326 WEE2P0C1S8 567 aa3.94□□□□□ -1.78
VPS50-209ENST00000467326 ALOX12P18054 663 aa3.94□□□□□ -1.78
VPS50-209ENST00000467326 CD72P21854 359 aa3.94□□□□□ -1.78
VPS50-209ENST00000467326 CNTFP26441 200 aa3.94□□□□□ -1.78
VPS50-209ENST00000467326 TNFRSF8P28908 595 aa3.94□□□□□ -1.78
VPS50-209ENST00000467326 HNF1BP35680 557 aa3.94□□□□□ -1.78
VPS50-209ENST00000467326 NUDT6P53370 316 aa3.94□□□□□ -1.78
VPS50-209ENST00000467326 ARF3P61204 181 aaPredicted RBP3.94□□□□□ -1.78
VPS50-209ENST00000467326 DCAF7P61962 342 aa3.94□□□□□ -1.78
VPS50-209ENST00000467326 ARF1P84077 181 aaKnown RBP3.94□□□□□ -1.78
VPS50-209ENST00000467326 TLE2Q04725 743 aa3.94□□□□□ -1.78
VPS50-209ENST00000467326 DSC1Q08554 894 aa3.94□□□□□ -1.78
VPS50-209ENST00000467326 TRPC3Q13507 836 aa3.94□□□□□ -1.78
VPS50-209ENST00000467326 ANKRD1Q15327 319 aa3.94□□□□□ -1.78
VPS50-209ENST00000467326 MEA1Q16626 185 aa3.94□□□□□ -1.78
VPS50-209ENST00000467326 ODF2Q5BJF6 829 aa3.94□□□□□ -1.78
VPS50-209ENST00000467326 FBXO47Q5MNV8 452 aa3.94□□□□□ -1.78
VPS50-209ENST00000467326 SLC10A5Q5PT55 438 aa3.94□□□□□ -1.78
VPS50-209ENST00000467326 ATG9BQ674R7 924 aa3.94□□□□□ -1.78
VPS50-209ENST00000467326 C8orf82Q6P1X6 216 aaPredicted RBP3.94□□□□□ -1.78
VPS50-209ENST00000467326 ZNF449Q6P9G9 518 aa3.94□□□□□ -1.78
VPS50-209ENST00000467326 KRT74Q7RTS7 529 aa3.94□□□□□ -1.78
VPS50-209ENST00000467326 SDCCAG8Q86SQ7 713 aaPredicted RBP3.94□□□□□ -1.78
VPS50-209ENST00000467326 LRRTM4Q86VH4 590 aa3.94□□□□□ -1.78
VPS50-209ENST00000467326 TMTC1Q8IUR5 882 aa3.94□□□□□ -1.78
VPS50-209ENST00000467326 HERC6Q8IVU3 1022 aa3.94□□□□□ -1.78
VPS50-209ENST00000467326 CCAR2Q8N163 923 aaKnown RBP3.94□□□□□ -1.78
VPS50-209ENST00000467326 OTUD6BQ8N6M0 293 aa3.94□□□□□ -1.78
VPS50-209ENST00000467326 TBC1D22AQ8WUA7 517 aa3.94□□□□□ -1.78
VPS50-209ENST00000467326 COG8Q96MW5 612 aa3.94□□□□□ -1.78
VPS50-209ENST00000467326 PYM1Q9BRP8 204 aaKnown RBP3.94□□□□□ -1.78
VPS50-209ENST00000467326 STN1Q9H668 368 aaKnown RBP3.94□□□□□ -1.78
VPS50-209ENST00000467326 WDR6Q9NNW5 1121 aaKnown RBP3.94□□□□□ -1.78
VPS50-209ENST00000467326 ENTPD7Q9NQZ7 604 aa3.94□□□□□ -1.78
VPS50-209ENST00000467326 ATP8A2Q9NTI2 1148 aa3.94□□□□□ -1.78
VPS50-209ENST00000467326 NLKQ9UBE8 527 aa3.94□□□□□ -1.78
VPS50-209ENST00000467326 GIMAP2Q9UG22 337 aa3.94□□□□□ -1.78
VPS50-209ENST00000467326 ZHX1Q9UKY1 873 aaPredicted RBP3.94□□□□□ -1.78
VPS50-209ENST00000467326 CLDN16Q9Y5I7 305 aa3.94□□□□□ -1.78
VPS50-209ENST00000467326 SYNRGQ9UMZ2 1314 aa3.94□□□□□ -1.78
VPS50-209ENST00000467326 GPRASP1Q5JY77 1395 aa3.93□□□□□ -1.78
VPS50-209ENST00000467326 VWA3AA6NCI4 1184 aa3.93□□□□□ -1.78
VPS50-209ENST00000467326 TRIM64CA6NLI5 447 aa3.93□□□□□ -1.78
VPS50-209ENST00000467326 H7C0S8 307 aa3.93□□□□□ -1.78
VPS50-209ENST00000467326 USO1O60763 962 aaKnown RBP3.93□□□□□ -1.78
VPS50-209ENST00000467326 SOX30O94993 753 aa3.93□□□□□ -1.78
VPS50-209ENST00000467326 SERPINC1P01008 464 aa3.93□□□□□ -1.78
VPS50-209ENST00000467326 PRSS2P07478 247 aa3.93□□□□□ -1.78
VPS50-209ENST00000467326 CKMT1AP12532 417 aa3.93□□□□□ -1.78
VPS50-209ENST00000467326 AKR1B1P15121 316 aa3.93□□□□□ -1.78
VPS50-209ENST00000467326 STMN1P16949 149 aa3.93□□□□□ -1.78
VPS50-209ENST00000467326 CTPS1P17812 591 aa3.93□□□□□ -1.78
VPS50-209ENST00000467326 MUTP22033 750 aa3.93□□□□□ -1.78
VPS50-209ENST00000467326 DCTDP32321 178 aa3.93□□□□□ -1.78
VPS50-209ENST00000467326 TMF1P82094 1093 aa3.93□□□□□ -1.78
VPS50-209ENST00000467326 CDC16Q13042 620 aa3.93□□□□□ -1.78
VPS50-209ENST00000467326 PPP2R5CQ13362 524 aa3.93□□□□□ -1.78
VPS50-209ENST00000467326 SHBQ15464 509 aa3.93□□□□□ -1.78
VPS50-209ENST00000467326 PTPN14Q15678 1187 aa3.93□□□□□ -1.78
VPS50-209ENST00000467326 ASIC2Q16515 512 aa3.93□□□□□ -1.78
VPS50-209ENST00000467326 FAM205BPQ63HN1 556 aa3.93□□□□□ -1.78
VPS50-209ENST00000467326 ZNF324BQ6AW86 544 aaPredicted RBP3.93□□□□□ -1.78
VPS50-209ENST00000467326 NAPEPLDQ6IQ20 393 aa3.93□□□□□ -1.78
VPS50-209ENST00000467326 SLC30A6Q6NXT4 461 aa3.93□□□□□ -1.78
VPS50-209ENST00000467326 PATL1Q86TB9 770 aaKnown RBP3.93□□□□□ -1.78
VPS50-209ENST00000467326 GALNT13Q8IUC8 556 aa3.93□□□□□ -1.78
VPS50-209ENST00000467326 TSPYL6Q8N831 410 aa3.93□□□□□ -1.78
VPS50-209ENST00000467326 USP38Q8NB14 1042 aa3.93□□□□□ -1.78
VPS50-209ENST00000467326 CCDC191Q8NCU4 936 aa3.93□□□□□ -1.78
VPS50-209ENST00000467326 DNAAF1Q8NEP3 725 aa3.93□□□□□ -1.78
VPS50-209ENST00000467326 ZMIZ2Q8NF64 920 aa3.93□□□□□ -1.78
VPS50-209ENST00000467326 OR4N2Q8NGD1 307 aa3.93□□□□□ -1.78
VPS50-209ENST00000467326 OR8H1Q8NGG4 311 aa3.93□□□□□ -1.78
VPS50-209ENST00000467326 OR14A16Q8NHC5 309 aa3.93□□□□□ -1.78
VPS50-209ENST00000467326 SH3KBP1Q96B97 665 aa3.93□□□□□ -1.78
VPS50-209ENST00000467326 C7orf26Q96N11 449 aa3.93□□□□□ -1.78
VPS50-209ENST00000467326 TWNKQ96RR1 684 aa3.93□□□□□ -1.78
VPS50-209ENST00000467326 NPFFR1Q9GZQ6 430 aa3.93□□□□□ -1.78
VPS50-209ENST00000467326 CD93Q9NPY3 652 aa3.93□□□□□ -1.78
VPS50-209ENST00000467326 PDRG1Q9NUG6 133 aa3.93□□□□□ -1.78
VPS50-209ENST00000467326 ABCF3Q9NUQ8 709 aa3.93□□□□□ -1.78
VPS50-209ENST00000467326 IL36RNQ9UBH0 155 aa3.93□□□□□ -1.78
VPS50-209ENST00000467326 MTRRQ9UBK8 725 aa3.93□□□□□ -1.78
VPS50-209ENST00000467326 VPS28Q9UK41 221 aa3.93□□□□□ -1.78
VPS50-209ENST00000467326 CNPY2Q9Y2B0 182 aa3.93□□□□□ -1.78
VPS50-209ENST00000467326 PGPEP1LA6NFU8 196 aa3.92□□□□□ -1.78
VPS50-209ENST00000467326 KDM4EB2RXH2 506 aaPredicted RBP3.92□□□□□ -1.78
VPS50-209ENST00000467326 FAM157AC9JC47 383 aa3.92□□□□□ -1.78
VPS50-209ENST00000467326 KLK10O43240 276 aa3.92□□□□□ -1.78
VPS50-209ENST00000467326 ATP1A3P13637 1013 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms