RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 FOXD4Q12950 439 aaPredicted RBP12.71□□□□□ -0.37
UBR4-210ENST00000466969 KLHL40Q2TBA0 621 aa12.71□□□□□ -0.37
UBR4-210ENST00000466969 ZNF394Q53GI3 561 aa12.71□□□□□ -0.37
UBR4-210ENST00000466969 RABGAP1LQ5R372 815 aa12.71□□□□□ -0.37
UBR4-210ENST00000466969 SPOPLQ6IQ16 392 aa12.71□□□□□ -0.37
UBR4-210ENST00000466969 NYAP1Q6ZVC0 841 aa12.71□□□□□ -0.37
UBR4-210ENST00000466969 ARHGAP22Q7Z5H3 698 aa12.71□□□□□ -0.37
UBR4-210ENST00000466969 BIVMQ86UB2 503 aa12.71□□□□□ -0.37
UBR4-210ENST00000466969 C17orf82Q86X59 251 aaPredicted RBP12.71□□□□□ -0.37
UBR4-210ENST00000466969 ANKRD52Q8NB46 1076 aa12.71□□□□□ -0.37
UBR4-210ENST00000466969 XXYLT1Q8NBI6 393 aa12.71□□□□□ -0.37
UBR4-210ENST00000466969 CXorf40AQ8TE69 158 aa12.71□□□□□ -0.37
UBR4-210ENST00000466969 NUDT8Q8WV74 236 aa12.71□□□□□ -0.37
UBR4-210ENST00000466969 RELTQ969Z4 430 aa12.71□□□□□ -0.37
UBR4-210ENST00000466969 SERPINB11Q96P15 392 aa12.71□□□□□ -0.37
UBR4-210ENST00000466969 HEPHQ9BQS7 1158 aa12.71□□□□□ -0.37
UBR4-210ENST00000466969 TMEM168Q9H0V1 697 aa12.71□□□□□ -0.37
UBR4-210ENST00000466969 MUC3BQ9H195 1237 aa12.71□□□□□ -0.37
UBR4-210ENST00000466969 XPO7Q9UIA9 1087 aaKnown RBP12.71□□□□□ -0.37
UBR4-210ENST00000466969 FANCGO15287 622 aa12.7□□□□□ -0.38
UBR4-210ENST00000466969 MMP20O60882 483 aa12.7□□□□□ -0.38
UBR4-210ENST00000466969 KIAA0754O94854 1291 aa12.7□□□□□ -0.38
UBR4-210ENST00000466969 ENDOD1O94919 500 aa12.7□□□□□ -0.38
UBR4-210ENST00000466969 BMP6P22004 513 aa12.7□□□□□ -0.38
UBR4-210ENST00000466969 PTGIRP43119 386 aa12.7□□□□□ -0.38
UBR4-210ENST00000466969 CLCN6P51797 869 aa12.7□□□□□ -0.38
UBR4-210ENST00000466969 VAMP7P51809 220 aa12.7□□□□□ -0.38
UBR4-210ENST00000466969 LRRC14Q15048 493 aa12.7□□□□□ -0.38
UBR4-210ENST00000466969 CRB2Q5IJ48 1285 aa12.7□□□□□ -0.38
UBR4-210ENST00000466969 C22orf39Q6P5X5 142 aa12.7□□□□□ -0.38
UBR4-210ENST00000466969 SYVN1Q86TM6 617 aa12.7□□□□□ -0.38
UBR4-210ENST00000466969 RASGRP3Q8IV61 690 aa12.7□□□□□ -0.38
UBR4-210ENST00000466969 CT55Q8WUE5 264 aa12.7□□□□□ -0.38
UBR4-210ENST00000466969 DNAJC19Q96DA6 116 aa12.7□□□□□ -0.38
UBR4-210ENST00000466969 FOXC2Q99958 501 aa12.7□□□□□ -0.38
UBR4-210ENST00000466969 C2orf49Q9BVC5 232 aaPredicted RBP12.7□□□□□ -0.38
UBR4-210ENST00000466969 CYP3A43Q9HB55 503 aa12.7□□□□□ -0.38
UBR4-210ENST00000466969 DLL4Q9NR61 685 aa12.7□□□□□ -0.38
UBR4-210ENST00000466969 SPATS2LQ9NUQ6 558 aaKnown RBP12.7□□□□□ -0.38
UBR4-210ENST00000466969 OR1A2Q9Y585 309 aa12.7□□□□□ -0.38
UBR4-210ENST00000466969 MDC1Q14676 2089 aaKnown RBP12.69□□□□□ -0.38
UBR4-210ENST00000466969 C16orf96A6NNT2 1141 aa12.69□□□□□ -0.38
UBR4-210ENST00000466969 TULP2O00295 520 aa12.69□□□□□ -0.38
UBR4-210ENST00000466969 XPO1O14980 1071 aaKnown RBP12.69□□□□□ -0.38
UBR4-210ENST00000466969 SMAD6O43541 496 aaKnown RBP12.69□□□□□ -0.38
UBR4-210ENST00000466969 MT-ND3P03897 115 aa12.69□□□□□ -0.38
UBR4-210ENST00000466969 TIMP2P16035 220 aa12.69□□□□□ -0.38
UBR4-210ENST00000466969 DAOAP59103 153 aa12.69□□□□□ -0.38
UBR4-210ENST00000466969 TMEM198Q66K66 360 aa12.69□□□□□ -0.38
UBR4-210ENST00000466969 ANKRD40Q6AI12 368 aa12.69□□□□□ -0.38
UBR4-210ENST00000466969 FOXR2Q6PJQ5 311 aa12.69□□□□□ -0.38
UBR4-210ENST00000466969 RPTNQ6XPR3 784 aa12.69□□□□□ -0.38
UBR4-210ENST00000466969 FAM186BQ8IYM0 893 aa12.69□□□□□ -0.38
UBR4-210ENST00000466969 OR56A4Q8NGH8 313 aa12.69□□□□□ -0.38
UBR4-210ENST00000466969 OR10G6Q8NH81 332 aa12.69□□□□□ -0.38
UBR4-210ENST00000466969 CCL4L1Q8NHW4 92 aa12.69□□□□□ -0.38
UBR4-210ENST00000466969 OR1E3Q8WZA6 343 aa12.69□□□□□ -0.38
UBR4-210ENST00000466969 TATDN2Q93075 761 aa12.69□□□□□ -0.38
UBR4-210ENST00000466969 CXXC4Q9H2H0 198 aa12.69□□□□□ -0.38
UBR4-210ENST00000466969 LHX9Q9NQ69 397 aa12.69□□□□□ -0.38
UBR4-210ENST00000466969 CNGB3Q9NQW8 809 aa12.69□□□□□ -0.38
UBR4-210ENST00000466969 LNPEPQ9UIQ6 1025 aa12.69□□□□□ -0.38
UBR4-210ENST00000466969 E2F3O00716 465 aa12.68□□□□□ -0.38
UBR4-210ENST00000466969 PPM1DO15297 605 aa12.68□□□□□ -0.38
UBR4-210ENST00000466969 NDUFA10O95299 355 aa12.68□□□□□ -0.38
UBR4-210ENST00000466969 ASS1P00966 412 aaKnown RBP12.68□□□□□ -0.38
UBR4-210ENST00000466969 FGF1P05230 155 aa12.68□□□□□ -0.38
UBR4-210ENST00000466969 LCP1P13796 627 aa12.68□□□□□ -0.38
UBR4-210ENST00000466969 DNA2P51530 1060 aa12.68□□□□□ -0.38
UBR4-210ENST00000466969 RPS15P62841 145 aaKnown RBP12.68□□□□□ -0.38
UBR4-210ENST00000466969 RAPSNQ13702 412 aa12.68□□□□□ -0.38
UBR4-210ENST00000466969 RAPGEF1Q13905 1077 aa12.68□□□□□ -0.38
UBR4-210ENST00000466969 INPP5AQ14642 412 aa12.68□□□□□ -0.38
UBR4-210ENST00000466969 VWA5B1Q5TIE3 1220 aa12.68□□□□□ -0.38
UBR4-210ENST00000466969 HGSNATQ68CP4 663 aa12.68□□□□□ -0.38
UBR4-210ENST00000466969 KCTD16Q68DU8 428 aa12.68□□□□□ -0.38
UBR4-210ENST00000466969 MTFR2Q6P444 385 aa12.68□□□□□ -0.38
UBR4-210ENST00000466969 OR52K2Q8NGK3 314 aa12.68□□□□□ -0.38
UBR4-210ENST00000466969 SLC39A13Q96H72 371 aa12.68□□□□□ -0.38
UBR4-210ENST00000466969 BTN2A3PQ96KV6 586 aa12.68□□□□□ -0.38
UBR4-210ENST00000466969 GPR87Q9BY21 358 aa12.68□□□□□ -0.38
UBR4-210ENST00000466969 IMPG2Q9BZV3 1241 aa12.68□□□□□ -0.38
UBR4-210ENST00000466969 ZDHHC6Q9H6R6 413 aa12.68□□□□□ -0.38
UBR4-210ENST00000466969 AGPAT3Q9NRZ7 376 aa12.68□□□□□ -0.38
UBR4-210ENST00000466969 PANK4Q9NVE7 773 aa12.68□□□□□ -0.38
UBR4-210ENST00000466969 MOSPD1Q9UJG1 213 aa12.68□□□□□ -0.38
UBR4-210ENST00000466969 PCDHGA10Q9Y5H3 936 aa12.68□□□□□ -0.38
UBR4-210ENST00000466969 OR51B4Q9Y5P0 310 aa12.68□□□□□ -0.38
UBR4-210ENST00000466969 FLNAP21333 2647 aaKnown RBP12.67□□□□□ -0.38
UBR4-210ENST00000466969 LRRIQ3A6PVS8 624 aaPredicted RBP12.67□□□□□ -0.38
UBR4-210ENST00000466969 SNAP91O60641 907 aa12.67□□□□□ -0.38
UBR4-210ENST00000466969 TMEM63AO94886 807 aa12.67□□□□□ -0.38
UBR4-210ENST00000466969 LTFP02788 710 aa12.67□□□□□ -0.38
UBR4-210ENST00000466969 KELP23276 732 aa12.67□□□□□ -0.38
UBR4-210ENST00000466969 PTPN4P29074 926 aa12.67□□□□□ -0.38
UBR4-210ENST00000466969 PIK3CAP42336 1068 aa12.67□□□□□ -0.38
UBR4-210ENST00000466969 NDST2P52849 883 aa12.67□□□□□ -0.38
UBR4-210ENST00000466969 IST1P53990 364 aa12.67□□□□□ -0.38
UBR4-210ENST00000466969 RPS18P62269 152 aaKnown RBP12.67□□□□□ -0.38
UBR4-210ENST00000466969 ASIC2Q16515 512 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms