RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 MCCC1Q96RQ3 725 aaPredicted RBP11.22□□□□□ -0.61
VCP-204ENST00000466100 APOL2Q9BQE5 337 aa11.22□□□□□ -0.61
VCP-204ENST00000466100 FSD1LQ9BXM9 530 aa11.22□□□□□ -0.61
VCP-204ENST00000466100 COL25A1Q9BXS0 654 aaPredicted RBP11.22□□□□□ -0.61
VCP-204ENST00000466100 NEUROG2Q9H2A3 272 aa11.22□□□□□ -0.61
VCP-204ENST00000466100 EPC1Q9H2F5 836 aa11.22□□□□□ -0.61
VCP-204ENST00000466100 PABPC3Q9H361 631 aaKnown RBP11.22□□□□□ -0.61
VCP-204ENST00000466100 EPHX3Q9H6B9 360 aa11.22□□□□□ -0.61
VCP-204ENST00000466100 EPB41L5Q9HCM4 733 aa11.22□□□□□ -0.61
VCP-204ENST00000466100 POLMQ9NP87 494 aaPredicted RBP11.22□□□□□ -0.61
VCP-204ENST00000466100 C11orf16Q9NQ32 467 aa11.22□□□□□ -0.61
VCP-204ENST00000466100 GOLGA6AQ9NYA3 693 aa11.22□□□□□ -0.61
VCP-204ENST00000466100 SERGEFQ9UGK8 458 aa11.22□□□□□ -0.61
VCP-204ENST00000466100 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.22□□□□□ -0.61
VCP-204ENST00000466100 MYO15AQ9UKN7 3530 aa11.22□□□□□ -0.61
VCP-204ENST00000466100 V9GYY5 206 aaPredicted RBP11.22□□□□□ -0.61
VCP-204ENST00000466100 USP34Q70CQ2 3546 aa11.22□□□□□ -0.61
VCP-204ENST00000466100 FANCMQ8IYD8 2048 aa11.21□□□□□ -0.61
VCP-204ENST00000466100 A0A0J9YYE9 177 aa11.21□□□□□ -0.61
VCP-204ENST00000466100 A0A1W2PQ67 120 aa11.21□□□□□ -0.61
VCP-204ENST00000466100 C16orf96A6NNT2 1141 aa11.21□□□□□ -0.61
VCP-204ENST00000466100 UPK3BL1B0FP48 263 aa11.21□□□□□ -0.61
VCP-204ENST00000466100 ANKRD66B4E2M5 251 aa11.21□□□□□ -0.61
VCP-204ENST00000466100 C10orf142B7Z368 130 aa11.21□□□□□ -0.61
VCP-204ENST00000466100 UPK3BL2E5RIL1 263 aa11.21□□□□□ -0.61
VCP-204ENST00000466100 SMAPO00193 183 aa11.21□□□□□ -0.61
VCP-204ENST00000466100 TNFRSF10AO00220 468 aa11.21□□□□□ -0.61
VCP-204ENST00000466100 NDC80O14777 642 aa11.21□□□□□ -0.61
VCP-204ENST00000466100 AREL1O15033 823 aa11.21□□□□□ -0.61
VCP-204ENST00000466100 RNASEH1O60930 286 aaKnown RBP11.21□□□□□ -0.61
VCP-204ENST00000466100 IGLV3-19P01714 112 aa11.21□□□□□ -0.61
VCP-204ENST00000466100 TRBC1P01850 177 aa11.21□□□□□ -0.61
VCP-204ENST00000466100 TDGF1P13385 188 aa11.21□□□□□ -0.61
VCP-204ENST00000466100 TIMP2P16035 220 aa11.21□□□□□ -0.61
VCP-204ENST00000466100 C5AR1P21730 350 aa11.21□□□□□ -0.61
VCP-204ENST00000466100 TNFRSF8P28908 595 aa11.21□□□□□ -0.61
VCP-204ENST00000466100 SLC8A1P32418 973 aa11.21□□□□□ -0.61
VCP-204ENST00000466100 P2RY2P41231 377 aa11.21□□□□□ -0.61
VCP-204ENST00000466100 ABL2P42684 1182 aa11.21□□□□□ -0.61
VCP-204ENST00000466100 CARSP49589 748 aaKnown RBP11.21□□□□□ -0.61
VCP-204ENST00000466100 ZBTB16Q05516 673 aa11.21□□□□□ -0.61
VCP-204ENST00000466100 CNTN1Q12860 1018 aa11.21□□□□□ -0.61
VCP-204ENST00000466100 ERCC6LQ2NKX8 1250 aa11.21□□□□□ -0.61
VCP-204ENST00000466100 AGBL4Q5VU57 503 aa11.21□□□□□ -0.61
VCP-204ENST00000466100 FAM46CQ5VWP2 391 aa11.21□□□□□ -0.61
VCP-204ENST00000466100 CCDC70Q6NSX1 233 aa11.21□□□□□ -0.61
VCP-204ENST00000466100 LRRC8BQ6P9F7 803 aa11.21□□□□□ -0.61
VCP-204ENST00000466100 ERN2Q76MJ5 926 aaKnown RBP11.21□□□□□ -0.61
VCP-204ENST00000466100 KDELC2Q7Z4H8 507 aa11.21□□□□□ -0.61
VCP-204ENST00000466100 LINC00523Q86TU6 105 aa11.21□□□□□ -0.61
VCP-204ENST00000466100 CACUL1Q86Y37 369 aa11.21□□□□□ -0.61
VCP-204ENST00000466100 AGGF1Q8N302 714 aaeCLIP11.21□□□□□ -0.61
VCP-204ENST00000466100 BBOF1Q8ND07 529 aa11.21□□□□□ -0.61
VCP-204ENST00000466100 LPCAT1Q8NF37 534 aa11.21□□□□□ -0.61
VCP-204ENST00000466100 MDGA1Q8NFP4 955 aa11.21□□□□□ -0.61
VCP-204ENST00000466100 TSTD1Q8NFU3 115 aa11.21□□□□□ -0.61
VCP-204ENST00000466100 OR52K1Q8NGK4 314 aa11.21□□□□□ -0.61
VCP-204ENST00000466100 FBXO25Q8TCJ0 367 aa11.21□□□□□ -0.61
VCP-204ENST00000466100 PDCD6IPQ8WUM4 868 aaKnown RBP11.21□□□□□ -0.61
VCP-204ENST00000466100 RUBCNQ92622 972 aa11.21□□□□□ -0.61
VCP-204ENST00000466100 SIPA1Q96FS4 1042 aa11.21□□□□□ -0.61
VCP-204ENST00000466100 IFT43Q96FT9 208 aa11.21□□□□□ -0.61
VCP-204ENST00000466100 PPP1R16AQ96I34 528 aa11.21□□□□□ -0.61
VCP-204ENST00000466100 SERPINB12Q96P63 405 aa11.21□□□□□ -0.61
VCP-204ENST00000466100 LYSMD1Q96S90 227 aa11.21□□□□□ -0.61
VCP-204ENST00000466100 FAM129AQ9BZQ8 928 aa11.21□□□□□ -0.61
VCP-204ENST00000466100 CD93Q9NPY3 652 aa11.21□□□□□ -0.61
VCP-204ENST00000466100 PRMT8Q9NR22 394 aaPredicted RBP11.21□□□□□ -0.61
VCP-204ENST00000466100 FAM114A2Q9NRY5 505 aa11.21□□□□□ -0.61
VCP-204ENST00000466100 USP36Q9P275 1121 aaKnown RBP11.21□□□□□ -0.61
VCP-204ENST00000466100 ANAPC5Q9UJX4 755 aa11.21□□□□□ -0.61
VCP-204ENST00000466100 PHTF1Q9UMS5 762 aa11.21□□□□□ -0.61
VCP-204ENST00000466100 SCML1Q9UN30 329 aa11.21□□□□□ -0.61
VCP-204ENST00000466100 CACNA1HO95180 2353 aa11.21□□□□□ -0.62
VCP-204ENST00000466100 PLXNB3Q9ULL4 1909 aa11.2□□□□□ -0.62
VCP-204ENST00000466100 CAPN8A6NHC0 703 aa11.2□□□□□ -0.62
VCP-204ENST00000466100 E7ESA3 106 aa11.2□□□□□ -0.62
VCP-204ENST00000466100 GOLGA8MH3BSY2 632 aa11.2□□□□□ -0.62
VCP-204ENST00000466100 PLK4O00444 970 aa11.2□□□□□ -0.62
VCP-204ENST00000466100 SLC34A2O95436 690 aa11.2□□□□□ -0.62
VCP-204ENST00000466100 APBB3O95704 486 aa11.2□□□□□ -0.62
VCP-204ENST00000466100 PRKCGP05129 697 aa11.2□□□□□ -0.62
VCP-204ENST00000466100 MLNP12872 115 aa11.2□□□□□ -0.62
VCP-204ENST00000466100 ADRB3P13945 408 aa11.2□□□□□ -0.62
VCP-204ENST00000466100 MMP12P39900 470 aa11.2□□□□□ -0.62
VCP-204ENST00000466100 LMAN1P49257 510 aa11.2□□□□□ -0.62
VCP-204ENST00000466100 CCR3P51677 355 aa11.2□□□□□ -0.62
VCP-204ENST00000466100 NEK3P51956 506 aa11.2□□□□□ -0.62
VCP-204ENST00000466100 TAS2R38P59533 333 aa11.2□□□□□ -0.62
VCP-204ENST00000466100 CAV1Q03135 178 aa11.2□□□□□ -0.62
VCP-204ENST00000466100 CDH17Q12864 832 aa11.2□□□□□ -0.62
VCP-204ENST00000466100 CALCOCO2Q13137 446 aa11.2□□□□□ -0.62
VCP-204ENST00000466100 CUL1Q13616 776 aa11.2□□□□□ -0.62
VCP-204ENST00000466100 NAA30Q147X3 362 aaPredicted RBP11.2□□□□□ -0.62
VCP-204ENST00000466100 PTPRRQ15256 657 aa11.2□□□□□ -0.62
VCP-204ENST00000466100 CDKN3Q16667 212 aa11.2□□□□□ -0.62
VCP-204ENST00000466100 UGP2Q16851 508 aa11.2□□□□□ -0.62
VCP-204ENST00000466100 MSS51Q4VC12 460 aa11.2□□□□□ -0.62
VCP-204ENST00000466100 LRRC73Q5JTD7 316 aa11.2□□□□□ -0.62
VCP-204ENST00000466100 USP30Q70CQ3 517 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms