RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 STK40Q8N2I9 435 aa17.07■□□□□ 0.32
EXOSC3-203ENST00000465229 PJA1Q8NG27 643 aa17.07■□□□□ 0.32
EXOSC3-203ENST00000465229 BCAS4Q8TDM0 211 aa17.07■□□□□ 0.32
EXOSC3-203ENST00000465229 ERLEC1Q96DZ1 483 aa17.07■□□□□ 0.32
EXOSC3-203ENST00000465229 FAM129BQ96TA1 746 aa17.07■□□□□ 0.32
EXOSC3-203ENST00000465229 HEPHQ9BQS7 1158 aa17.07■□□□□ 0.32
EXOSC3-203ENST00000465229 MLPHQ9BV36 600 aaPredicted RBP17.07■□□□□ 0.32
EXOSC3-203ENST00000465229 CPEB1Q9BZB8 566 aaKnown RBP17.07■□□□□ 0.32
EXOSC3-203ENST00000465229 A0A1W2PQF6 199 aa17.07■□□□□ 0.32
EXOSC3-203ENST00000465229 ANXA9O76027 345 aa17.07■□□□□ 0.32
EXOSC3-203ENST00000465229 SERPINF2P08697 491 aa17.07■□□□□ 0.32
EXOSC3-203ENST00000465229 PHBP35232 272 aa17.07■□□□□ 0.32
EXOSC3-203ENST00000465229 MAPK8P45983 427 aa17.07■□□□□ 0.32
EXOSC3-203ENST00000465229 SEMA5AQ13591 1074 aa17.07■□□□□ 0.32
EXOSC3-203ENST00000465229 GAS6Q14393 721 aa17.07■□□□□ 0.32
EXOSC3-203ENST00000465229 PRPSAP1Q14558 356 aa17.07■□□□□ 0.32
EXOSC3-203ENST00000465229 TTC19Q6DKK2 380 aaPredicted RBP17.07■□□□□ 0.32
EXOSC3-203ENST00000465229 KIAA1211LQ6NV74 962 aa17.07■□□□□ 0.32
EXOSC3-203ENST00000465229 EXOC3L1Q86VI1 746 aa17.07■□□□□ 0.32
EXOSC3-203ENST00000465229 CLDN23Q96B33 292 aa17.07■□□□□ 0.32
EXOSC3-203ENST00000465229 POLR3BQ9NW08 1133 aaPredicted RBP17.07■□□□□ 0.32
EXOSC3-203ENST00000465229 SLC24A2Q9UI40 661 aa17.07■□□□□ 0.32
EXOSC3-203ENST00000465229 PCDHGC4Q9Y5F7 938 aa17.07■□□□□ 0.32
EXOSC3-203ENST00000465229 WASF2Q9Y6W5 498 aa17.07■□□□□ 0.32
EXOSC3-203ENST00000465229 CHURC1-FNTBB4DL54 471 aa17.06■□□□□ 0.32
EXOSC3-203ENST00000465229 SYNCRIPO60506 623 aaKnown RBP17.06■□□□□ 0.32
EXOSC3-203ENST00000465229 PMPCBO75439 489 aa17.06■□□□□ 0.32
EXOSC3-203ENST00000465229 TMEM63AO94886 807 aa17.06■□□□□ 0.32
EXOSC3-203ENST00000465229 PDGFBP01127 241 aaPredicted RBP17.06■□□□□ 0.32
EXOSC3-203ENST00000465229 CTSLP07711 333 aa17.06■□□□□ 0.32
EXOSC3-203ENST00000465229 HOXB2P14652 356 aa17.06■□□□□ 0.32
EXOSC3-203ENST00000465229 BASP1P80723 227 aaKnown RBP17.06■□□□□ 0.32
EXOSC3-203ENST00000465229 ELAVL3Q14576 367 aaKnown RBP17.06■□□□□ 0.32
EXOSC3-203ENST00000465229 ARSIQ5FYB1 569 aa17.06■□□□□ 0.32
EXOSC3-203ENST00000465229 EOGTQ5NDL2 527 aa17.06■□□□□ 0.32
EXOSC3-203ENST00000465229 SYCP2LQ5T4T6 812 aa17.06■□□□□ 0.32
EXOSC3-203ENST00000465229 KCTD11Q693B1 232 aa17.06■□□□□ 0.32
EXOSC3-203ENST00000465229 KDELC1Q6UW63 502 aa17.06■□□□□ 0.32
EXOSC3-203ENST00000465229 CAMK1DQ8IU85 385 aa17.06■□□□□ 0.32
EXOSC3-203ENST00000465229 PYROXD1Q8WU10 500 aa17.06■□□□□ 0.32
EXOSC3-203ENST00000465229 ZDHHC6Q9H6R6 413 aa17.06■□□□□ 0.32
EXOSC3-203ENST00000465229 CD248Q9HCU0 757 aa17.06■□□□□ 0.32
EXOSC3-203ENST00000465229 VPS45Q9NRW7 570 aa17.06■□□□□ 0.32
EXOSC3-203ENST00000465229 MMP17Q9ULZ9 603 aa17.06■□□□□ 0.32
EXOSC3-203ENST00000465229 AAR2Q9Y312 384 aaKnown RBP17.06■□□□□ 0.32
EXOSC3-203ENST00000465229 SIT1Q9Y3P8 196 aa17.06■□□□□ 0.32
EXOSC3-203ENST00000465229 ZDBF2Q9HCK1 2354 aa17.06■□□□□ 0.32
EXOSC3-203ENST00000465229 EXOC1LA0A1B0GW35 172 aa17.05■□□□□ 0.32
EXOSC3-203ENST00000465229 PIGNO95427 931 aa17.05■□□□□ 0.32
EXOSC3-203ENST00000465229 APRTP07741 180 aa17.05■□□□□ 0.32
EXOSC3-203ENST00000465229 ALADP13716 330 aa17.05■□□□□ 0.32
EXOSC3-203ENST00000465229 COL9A1P20849 921 aa17.05■□□□□ 0.32
EXOSC3-203ENST00000465229 GEMP55040 296 aa17.05■□□□□ 0.32
EXOSC3-203ENST00000465229 HNRNPH2P55795 449 aaKnown RBP17.05■□□□□ 0.32
EXOSC3-203ENST00000465229 WNT3AP56704 352 aa17.05■□□□□ 0.32
EXOSC3-203ENST00000465229 RAD51Q06609 339 aa17.05■□□□□ 0.32
EXOSC3-203ENST00000465229 MPP3Q13368 585 aa17.05■□□□□ 0.32
EXOSC3-203ENST00000465229 FASTKD3Q14CZ7 662 aaKnown RBP17.05■□□□□ 0.32
EXOSC3-203ENST00000465229 SLC14A2Q15849 920 aa17.05■□□□□ 0.32
EXOSC3-203ENST00000465229 SKIDA1Q1XH10 827 aa17.05■□□□□ 0.32
EXOSC3-203ENST00000465229 FNBP1LQ5T0N5 605 aa17.05■□□□□ 0.32
EXOSC3-203ENST00000465229 PDCD7Q8N8D1 485 aaKnown RBP17.05■□□□□ 0.32
EXOSC3-203ENST00000465229 MCUQ8NE86 351 aa17.05■□□□□ 0.32
EXOSC3-203ENST00000465229 FLCNQ8NFG4 579 aa17.05■□□□□ 0.32
EXOSC3-203ENST00000465229 OR8D1Q8WZ84 308 aa17.05■□□□□ 0.32
EXOSC3-203ENST00000465229 MRGPRX2Q96LB1 330 aa17.05■□□□□ 0.32
EXOSC3-203ENST00000465229 PPP1R2P1Q96PQ5 205 aa17.05■□□□□ 0.32
EXOSC3-203ENST00000465229 TUBGCP5Q96RT8 1024 aa17.05■□□□□ 0.32
EXOSC3-203ENST00000465229 MFSD1Q9H3U5 465 aa17.05■□□□□ 0.32
EXOSC3-203ENST00000465229 ATP13A3Q9H7F0 1226 aa17.05■□□□□ 0.32
EXOSC3-203ENST00000465229 IL36AQ9UHA7 158 aa17.05■□□□□ 0.32
EXOSC3-203ENST00000465229 PPM1HQ9ULR3 514 aa17.05■□□□□ 0.32
EXOSC3-203ENST00000465229 RAI2Q9Y5P3 530 aa17.05■□□□□ 0.32
EXOSC3-203ENST00000465229 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.04■□□□□ 0.32
EXOSC3-203ENST00000465229 TCRBV7S3A2A0A539 114 aa17.04■□□□□ 0.32
EXOSC3-203ENST00000465229 TRAFD1O14545 582 aaPredicted RBP17.04■□□□□ 0.32
EXOSC3-203ENST00000465229 SPAG6O75602 509 aa17.04■□□□□ 0.32
EXOSC3-203ENST00000465229 LEFTY1O75610 366 aa17.04■□□□□ 0.32
EXOSC3-203ENST00000465229 BCL2L1Q07817 233 aa17.04■□□□□ 0.32
EXOSC3-203ENST00000465229 TRAF2Q12933 501 aa17.04■□□□□ 0.32
EXOSC3-203ENST00000465229 SPARCL1Q14515 664 aa17.04■□□□□ 0.32
EXOSC3-203ENST00000465229 STARD3Q14849 445 aa17.04■□□□□ 0.32
EXOSC3-203ENST00000465229 CCDC38Q502W7 563 aa17.04■□□□□ 0.32
EXOSC3-203ENST00000465229 TMEM92Q6UXU6 159 aa17.04■□□□□ 0.32
EXOSC3-203ENST00000465229 KDELC2Q7Z4H8 507 aa17.04■□□□□ 0.32
EXOSC3-203ENST00000465229 IPMKQ8NFU5 416 aa17.04■□□□□ 0.32
EXOSC3-203ENST00000465229 GRIN3AQ8TCU5 1115 aa17.04■□□□□ 0.32
EXOSC3-203ENST00000465229 LRIG1Q96JA1 1093 aa17.04■□□□□ 0.32
EXOSC3-203ENST00000465229 CCDC134Q9H6E4 229 aa17.04■□□□□ 0.32
EXOSC3-203ENST00000465229 C2orf42Q9NWW7 574 aa17.04■□□□□ 0.32
EXOSC3-203ENST00000465229 SARDHQ9UL12 918 aa17.04■□□□□ 0.32
EXOSC3-203ENST00000465229 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.04■□□□□ 0.32
EXOSC3-203ENST00000465229 GMNCA6NCL1 334 aa17.03■□□□□ 0.32
EXOSC3-203ENST00000465229 GOLGA8MH3BSY2 632 aa17.03■□□□□ 0.32
EXOSC3-203ENST00000465229 PSMD3O43242 534 aa17.03■□□□□ 0.32
EXOSC3-203ENST00000465229 HTRA2O43464 458 aaPredicted RBP17.03■□□□□ 0.32
EXOSC3-203ENST00000465229 ATG13O75143 517 aa17.03■□□□□ 0.32
EXOSC3-203ENST00000465229 AP2A1O95782 977 aa17.03■□□□□ 0.32
EXOSC3-203ENST00000465229 FAM107AO95990 144 aa17.03■□□□□ 0.32
EXOSC3-203ENST00000465229 PRLP01236 227 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms