RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 FAM149B1Q96BN6 582 aa1.99□□□□□ -2.09
NUCKS1-202ENST00000464938 NSUN4Q96CB9 384 aaKnown RBP1.99□□□□□ -2.09
NUCKS1-202ENST00000464938 PABPC5Q96DU9 382 aaKnown RBP1.99□□□□□ -2.09
NUCKS1-202ENST00000464938 RSRC1Q96IZ7 334 aaKnown RBP1.99□□□□□ -2.09
NUCKS1-202ENST00000464938 SLC41A2Q96JW4 573 aa1.99□□□□□ -2.09
NUCKS1-202ENST00000464938 CAMK1GQ96NX5 476 aa1.99□□□□□ -2.09
NUCKS1-202ENST00000464938 MXRA8Q9BRK3 442 aa1.99□□□□□ -2.09
NUCKS1-202ENST00000464938 KRTAP1-5Q9BYS1 174 aa1.99□□□□□ -2.09
NUCKS1-202ENST00000464938 NPFFR1Q9GZQ6 430 aa1.99□□□□□ -2.09
NUCKS1-202ENST00000464938 TKTL2Q9H0I9 626 aa1.99□□□□□ -2.09
NUCKS1-202ENST00000464938 ISCUQ9H1K1 167 aa1.99□□□□□ -2.09
NUCKS1-202ENST00000464938 KCNN2Q9H2S1 579 aa1.99□□□□□ -2.09
NUCKS1-202ENST00000464938 GHITMQ9H3K2 345 aa1.99□□□□□ -2.09
NUCKS1-202ENST00000464938 PDZD7Q9H5P4 517 aa1.99□□□□□ -2.09
NUCKS1-202ENST00000464938 POLR1BQ9H9Y6 1135 aa1.99□□□□□ -2.09
NUCKS1-202ENST00000464938 DDX4Q9NQI0 724 aaKnown RBP1.99□□□□□ -2.09
NUCKS1-202ENST00000464938 SMYD2Q9NRG4 433 aa1.99□□□□□ -2.09
NUCKS1-202ENST00000464938 DIAPH3Q9NSV4 1193 aa1.99□□□□□ -2.09
NUCKS1-202ENST00000464938 ELOVL5Q9NYP7 299 aa1.99□□□□□ -2.09
NUCKS1-202ENST00000464938 HAO1Q9UJM8 370 aa1.99□□□□□ -2.09
NUCKS1-202ENST00000464938 LYVE1Q9Y5Y7 322 aa1.99□□□□□ -2.09
NUCKS1-202ENST00000464938 KCNE2Q9Y6J6 123 aa1.99□□□□□ -2.09
NUCKS1-202ENST00000464938 RSF1Q96T23 1441 aaPredicted RBP1.99□□□□□ -2.09
NUCKS1-202ENST00000464938 ARHGEF40Q8TER5 1519 aa1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 FAM237BA0A1B0GVD1 139 aa1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 FRMD3A2A2Y4 597 aa1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 ANKRD18BA2A2Z9 1011 aa1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 LRRC53A6NM62 1247 aa1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 BECN2A8MW95 431 aa1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 A8MZ25 164 aa1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 MS4A18H0YCH9 400 aa1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 SCAMP1O15126 338 aa1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 SPRY3O43610 288 aa1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 ZC3H11AO75152 810 aaKnown RBP eCLIP1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 SPARCP09486 303 aa1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 PSG1P11464 419 aa1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 PCNAP12004 261 aa1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 ETFAP13804 333 aa1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 CHATP28329 748 aa1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 PBX3P40426 434 aa1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 RFX2P48378 723 aa1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 CTCFP49711 727 aaPredicted RBP1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 RARSP54136 660 aaKnown RBP1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 PMS2P54278 862 aa1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 DRG2P55039 364 aaKnown RBP1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 P2RX3P56373 397 aa1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 ABATP80404 500 aa1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 CEBPZQ03701 1054 aaKnown RBP1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 NIPAL4Q0D2K0 466 aa1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 LMOD3Q0VAK6 560 aa1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 Q0VFX4 171 aa1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 NEXNQ0ZGT2 675 aa1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 FOXD4Q12950 439 aaPredicted RBP1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 CSTF3Q12996 717 aaKnown RBP1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 CAPSQ13938 189 aa1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 VEPH1Q14D04 833 aa1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 MEA1Q16626 185 aa1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 TCTN1Q2MV58 587 aa1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 C2orf68Q2NKX9 166 aa1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 DPCR1Q3MIW9 517 aa1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 DCAF6Q58WW2 860 aa1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 JADE1Q6IE81 842 aa1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 LRRC8EQ6NSJ5 796 aa1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 TTI2Q6NXR4 508 aa1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 ANKRD54Q6NXT1 300 aa1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 C16orf54Q6UWD8 224 aa1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 MTSS1LQ765P7 747 aa1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 FASTKD5Q7L8L6 764 aaKnown RBP1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 TECPR1Q7Z6L1 1165 aa1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 ARHGAP12Q8IWW6 846 aa1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 SLC35F3Q8IY50 421 aa1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 CNTROBQ8N137 903 aa1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 C7orf57Q8NEG2 295 aa1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 LPAR1Q92633 364 aa1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 GTF3C6Q969F1 213 aa1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 SLC25A28Q96A46 364 aa1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 FBXL8Q96CD0 374 aa1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 MMABQ96EY8 250 aaPredicted RBP1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 ZNF48Q96MX3 618 aaPredicted RBP1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 WDFY2Q96P53 400 aa1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 BARD1Q99728 777 aaKnown RBP1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 FAM110AQ9BQ89 295 aa1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 C1QTNF5Q9BXJ0 243 aa1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 POLDIP3Q9BY77 421 aaKnown RBP1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 KRTAP2-2Q9BYT5 123 aa1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 LHPPQ9H008 270 aa1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 ESRP2Q9H6T0 727 aaKnown RBP1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 CLK4Q9HAZ1 481 aaKnown RBP1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 PLAC1Q9HBJ0 212 aa1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 MAGEE1Q9HCI5 957 aa1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 LTB4R2Q9NPC1 389 aa1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 MKKSQ9NPJ1 570 aaPredicted RBP1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 SLC6A13Q9NSD5 602 aa1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 POT1Q9NUX5 634 aa1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 HCFC1R1Q9NWW0 138 aa1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 PLK2Q9NYY3 685 aa1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 IL36RNQ9UBH0 155 aa1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 CNOT8Q9UFF9 292 aaKnown RBP1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 SWAP70Q9UH65 585 aa1.98□□□□□ -2.09
NUCKS1-202ENST00000464938 FBXO9Q9UK97 447 aaPredicted RBP1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms