RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 APOOQ9BUR5 198 aa17.44■□□□□ 0.38
HMGN1-210ENST00000464078 FAM117AQ9C073 453 aa17.44■□□□□ 0.38
HMGN1-210ENST00000464078 LRRN3Q9H3W5 708 aa17.44■□□□□ 0.38
HMGN1-210ENST00000464078 LHX3Q9UBR4 397 aa17.44■□□□□ 0.38
HMGN1-210ENST00000464078 KLQ9UEF7 1012 aa17.44■□□□□ 0.38
HMGN1-210ENST00000464078 HEMK1Q9Y5R4 338 aaPredicted RBP17.44■□□□□ 0.38
HMGN1-210ENST00000464078 TERTO14746 1132 aaKnown RBP17.43■□□□□ 0.38
HMGN1-210ENST00000464078 HGFP14210 728 aa17.43■□□□□ 0.38
HMGN1-210ENST00000464078 GLB1P16278 677 aa17.43■□□□□ 0.38
HMGN1-210ENST00000464078 MMP12P39900 470 aa17.43■□□□□ 0.38
HMGN1-210ENST00000464078 CDR2Q01850 454 aa17.43■□□□□ 0.38
HMGN1-210ENST00000464078 ZFP36L1Q07352 338 aaKnown RBP17.43■□□□□ 0.38
HMGN1-210ENST00000464078 NFATC3Q12968 1075 aa17.43■□□□□ 0.38
HMGN1-210ENST00000464078 MTM1Q13496 603 aa17.43■□□□□ 0.38
HMGN1-210ENST00000464078 TGIF1Q15583 401 aa17.43■□□□□ 0.38
HMGN1-210ENST00000464078 UGP2Q16851 508 aa17.43■□□□□ 0.38
HMGN1-210ENST00000464078 PARP15Q460N3 678 aa17.43■□□□□ 0.38
HMGN1-210ENST00000464078 CCNJLQ8IV13 435 aa17.43■□□□□ 0.38
HMGN1-210ENST00000464078 JOSD2Q8TAC2 188 aa17.43■□□□□ 0.38
HMGN1-210ENST00000464078 FAM172AQ8WUF8 416 aa17.43■□□□□ 0.38
HMGN1-210ENST00000464078 PDXPQ96GD0 296 aa17.43■□□□□ 0.38
HMGN1-210ENST00000464078 WDR92Q96MX6 357 aa17.43■□□□□ 0.38
HMGN1-210ENST00000464078 MAGEB5Q9BZ81 275 aa17.43■□□□□ 0.38
HMGN1-210ENST00000464078 PISDQ9UG56 409 aa17.43■□□□□ 0.38
HMGN1-210ENST00000464078 COQ6Q9Y2Z9 468 aa17.43■□□□□ 0.38
HMGN1-210ENST00000464078 LOXL2Q9Y4K0 774 aa17.43■□□□□ 0.38
HMGN1-210ENST00000464078 KRT10P13645 584 aa17.42■□□□□ 0.38
HMGN1-210ENST00000464078 XPAP23025 273 aaPredicted RBP17.42■□□□□ 0.38
HMGN1-210ENST00000464078 KIAA1024LP59773 190 aa17.42■□□□□ 0.38
HMGN1-210ENST00000464078 SERINC3Q13530 473 aa17.42■□□□□ 0.38
HMGN1-210ENST00000464078 INPP5AQ14642 412 aa17.42■□□□□ 0.38
HMGN1-210ENST00000464078 CAMK4Q16566 473 aa17.42■□□□□ 0.38
HMGN1-210ENST00000464078 BRAT1Q6PJG6 821 aa17.42■□□□□ 0.38
HMGN1-210ENST00000464078 OGFOD3Q6PK18 319 aa17.42■□□□□ 0.38
HMGN1-210ENST00000464078 ENPP7Q6UWV6 458 aa17.42■□□□□ 0.38
HMGN1-210ENST00000464078 RD3Q7Z3Z2 195 aa17.42■□□□□ 0.38
HMGN1-210ENST00000464078 SPRED1Q7Z699 444 aa17.42■□□□□ 0.38
HMGN1-210ENST00000464078 DNAAF5Q86Y56 855 aa17.42■□□□□ 0.38
HMGN1-210ENST00000464078 UMODL1-AS1Q8N2C9 162 aa17.42■□□□□ 0.38
HMGN1-210ENST00000464078 SLC20A1Q8WUM9 679 aa17.42■□□□□ 0.38
HMGN1-210ENST00000464078 HMCESQ96FZ2 354 aa17.42■□□□□ 0.38
HMGN1-210ENST00000464078 SEMA3CQ99985 751 aa17.42■□□□□ 0.38
HMGN1-210ENST00000464078 B3GNT4Q9C0J1 378 aa17.42■□□□□ 0.38
HMGN1-210ENST00000464078 KLC2Q9H0B6 622 aa17.42■□□□□ 0.38
HMGN1-210ENST00000464078 PCDH12Q9NPG4 1184 aa17.42■□□□□ 0.38
HMGN1-210ENST00000464078 SEPT10Q9P0V9 454 aa17.42■□□□□ 0.38
HMGN1-210ENST00000464078 IL17BQ9UHF5 180 aa17.42■□□□□ 0.38
HMGN1-210ENST00000464078 OR1A2Q9Y585 309 aa17.42■□□□□ 0.38
HMGN1-210ENST00000464078 PCDHGA4Q9Y5G9 962 aa17.42■□□□□ 0.38
HMGN1-210ENST00000464078 COL12A1Q99715 3063 aa17.41■□□□□ 0.38
HMGN1-210ENST00000464078 CFAP69A5D8W1 941 aa17.41■□□□□ 0.38
HMGN1-210ENST00000464078 WASH4PA8MWX3 477 aa17.41■□□□□ 0.38
HMGN1-210ENST00000464078 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.41■□□□□ 0.38
HMGN1-210ENST00000464078 RASA4BC9J798 803 aa17.41■□□□□ 0.38
HMGN1-210ENST00000464078 INSIG1O15503 277 aa17.41■□□□□ 0.38
HMGN1-210ENST00000464078 RASA4O43374 803 aa17.41■□□□□ 0.38
HMGN1-210ENST00000464078 SFTPCP11686 197 aa17.41■□□□□ 0.38
HMGN1-210ENST00000464078 CHRNB2P17787 502 aa17.41■□□□□ 0.38
HMGN1-210ENST00000464078 ITGB6P18564 788 aa17.41■□□□□ 0.38
HMGN1-210ENST00000464078 EPHB2P29323 1055 aa17.41■□□□□ 0.38
HMGN1-210ENST00000464078 LIG3P49916 1009 aa17.41■□□□□ 0.38
HMGN1-210ENST00000464078 FMO1Q01740 532 aa17.41■□□□□ 0.38
HMGN1-210ENST00000464078 PTP4A2Q12974 167 aa17.41■□□□□ 0.38
HMGN1-210ENST00000464078 SRSF6Q13247 344 aaKnown RBP17.41■□□□□ 0.38
HMGN1-210ENST00000464078 KCTD16Q68DU8 428 aa17.41■□□□□ 0.38
HMGN1-210ENST00000464078 ERAP2Q6P179 960 aa17.41■□□□□ 0.38
HMGN1-210ENST00000464078 TRIM72Q6ZMU5 477 aa17.41■□□□□ 0.38
HMGN1-210ENST00000464078 NYAP1Q6ZVC0 841 aa17.41■□□□□ 0.38
HMGN1-210ENST00000464078 DTX1Q86Y01 620 aa17.41■□□□□ 0.38
HMGN1-210ENST00000464078 ZNF354CQ86Y25 554 aa17.41■□□□□ 0.38
HMGN1-210ENST00000464078 SLITRK4Q8IW52 837 aa17.41■□□□□ 0.38
HMGN1-210ENST00000464078 EXTL1Q92935 676 aa17.41■□□□□ 0.38
HMGN1-210ENST00000464078 EXOC2Q96KP1 924 aa17.41■□□□□ 0.38
HMGN1-210ENST00000464078 ZNF641Q96N77 438 aaPredicted RBP17.41■□□□□ 0.38
HMGN1-210ENST00000464078 TUBGCP5Q96RT8 1024 aa17.41■□□□□ 0.38
HMGN1-210ENST00000464078 NCAPGQ9BPX3 1015 aa17.41■□□□□ 0.38
HMGN1-210ENST00000464078 C11orf70Q9BRQ4 267 aa17.41■□□□□ 0.38
HMGN1-210ENST00000464078 SUV39H2Q9H5I1 410 aa17.41■□□□□ 0.38
HMGN1-210ENST00000464078 PDFQ9HBH1 243 aa17.41■□□□□ 0.38
HMGN1-210ENST00000464078 ATP8A1Q9Y2Q0 1164 aa17.41■□□□□ 0.38
HMGN1-210ENST00000464078 DAAM1Q9Y4D1 1078 aa17.41■□□□□ 0.38
HMGN1-210ENST00000464078 BSNQ9UPA5 3926 aa17.41■□□□□ 0.38
HMGN1-210ENST00000464078 ARHGEF17Q96PE2 2063 aaPredicted RBP17.4■□□□□ 0.38
HMGN1-210ENST00000464078 PRAMEF33A0A0G2JMD5 474 aa17.4■□□□□ 0.38
HMGN1-210ENST00000464078 A0A1W2PQC6 194 aa17.4■□□□□ 0.38
HMGN1-210ENST00000464078 NUDT21O43809 227 aaKnown RBP17.4■□□□□ 0.38
HMGN1-210ENST00000464078 PRAMEF10O60809 474 aa17.4■□□□□ 0.38
HMGN1-210ENST00000464078 PIGNO95427 931 aa17.4■□□□□ 0.38
HMGN1-210ENST00000464078 KRT3P12035 628 aa17.4■□□□□ 0.38
HMGN1-210ENST00000464078 CD82P27701 267 aa17.4■□□□□ 0.38
HMGN1-210ENST00000464078 ERCC5P28715 1186 aaPredicted RBP17.4■□□□□ 0.38
HMGN1-210ENST00000464078 RFC1P35251 1148 aaPredicted RBP17.4■□□□□ 0.38
HMGN1-210ENST00000464078 TCEA2Q15560 299 aa17.4■□□□□ 0.38
HMGN1-210ENST00000464078 C14orf28Q4W4Y0 310 aa17.4■□□□□ 0.38
HMGN1-210ENST00000464078 MANEAQ5SRI9 462 aa17.4■□□□□ 0.38
HMGN1-210ENST00000464078 ATG14Q6ZNE5 492 aa17.4■□□□□ 0.38
HMGN1-210ENST00000464078 SLFN11Q7Z7L1 901 aa17.4■□□□□ 0.38
HMGN1-210ENST00000464078 CMKLR1Q99788 373 aa17.4■□□□□ 0.38
HMGN1-210ENST00000464078 ARHGAP9Q9BRR9 750 aa17.4■□□□□ 0.38
HMGN1-210ENST00000464078 GANQ9H2C0 597 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms