RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-204	ENST00000462815	UMODL1-AS1	Q8N2C9	162 aa		11.26	□□□□□ -0.61
PTPN7-204	ENST00000462815	SDR16C5	Q8N3Y7	309 aa		11.26	□□□□□ -0.61
PTPN7-204	ENST00000462815	PLA2G15	Q8NCC3	412 aa		11.26	□□□□□ -0.61
PTPN7-204	ENST00000462815	MSANTD4	Q8NCY6	345 aa		11.26	□□□□□ -0.61
PTPN7-204	ENST00000462815	HCAR2	Q8TDS4	363 aa		11.26	□□□□□ -0.61
PTPN7-204	ENST00000462815	PDXP	Q96GD0	296 aa		11.26	□□□□□ -0.61
PTPN7-204	ENST00000462815	EXOC2	Q96KP1	924 aa		11.26	□□□□□ -0.61
PTPN7-204	ENST00000462815	NSMCE3	Q96MG7	304 aa		11.26	□□□□□ -0.61
PTPN7-204	ENST00000462815	APOO	Q9BUR5	198 aa		11.26	□□□□□ -0.61
PTPN7-204	ENST00000462815	C1QTNF7	Q9BXJ2	289 aa		11.26	□□□□□ -0.61
PTPN7-204	ENST00000462815	FOXP3	Q9BZS1	431 aa		11.26	□□□□□ -0.61
PTPN7-204	ENST00000462815	LRRC19	Q9H756	370 aa		11.26	□□□□□ -0.61
PTPN7-204	ENST00000462815	PCDH12	Q9NPG4	1184 aa		11.26	□□□□□ -0.61
PTPN7-204	ENST00000462815	WDR70	Q9NW82	654 aa		11.26	□□□□□ -0.61
PTPN7-204	ENST00000462815	SIRPG	Q9P1W8	387 aa		11.26	□□□□□ -0.61
PTPN7-204	ENST00000462815	APPL1	Q9UKG1	709 aa		11.26	□□□□□ -0.61
PTPN7-204	ENST00000462815	HPCAL4	Q9UM19	191 aa		11.26	□□□□□ -0.61
PTPN7-204	ENST00000462815	OR1A2	Q9Y585	309 aa		11.26	□□□□□ -0.61
PTPN7-204	ENST00000462815	DGKB	Q9Y6T7	804 aa		11.26	□□□□□ -0.61
PTPN7-204	ENST00000462815	TMEM110-MUSTN1	A8MSY1	372 aa		11.25	□□□□□ -0.61
PTPN7-204	ENST00000462815	RASA4B	C9J798	803 aa		11.25	□□□□□ -0.61
PTPN7-204	ENST00000462815	CCP110	O43303	1012 aa		11.25	□□□□□ -0.61
PTPN7-204	ENST00000462815	RASA4	O43374	803 aa		11.25	□□□□□ -0.61
PTPN7-204	ENST00000462815	RPLP0	P05388	317 aa	Known RBP	11.25	□□□□□ -0.61
PTPN7-204	ENST00000462815	ALPI	P09923	528 aa		11.25	□□□□□ -0.61
PTPN7-204	ENST00000462815	ITGB6	P18564	788 aa		11.25	□□□□□ -0.61
PTPN7-204	ENST00000462815	ETV5	P41161	510 aa		11.25	□□□□□ -0.61
PTPN7-204	ENST00000462815	LIG3	P49916	1009 aa		11.25	□□□□□ -0.61
PTPN7-204	ENST00000462815	YBEY	P58557	167 aa	Predicted RBP	11.25	□□□□□ -0.61
PTPN7-204	ENST00000462815	SRP54	P61011	504 aa	Known RBP	11.25	□□□□□ -0.61
PTPN7-204	ENST00000462815	RHOA	P61586	193 aa		11.25	□□□□□ -0.61
PTPN7-204	ENST00000462815	INPP5A	Q14642	412 aa		11.25	□□□□□ -0.61
PTPN7-204	ENST00000462815	TCEA2	Q15560	299 aa		11.25	□□□□□ -0.61
PTPN7-204	ENST00000462815	ZSCAN23	Q3MJ62	389 aa		11.25	□□□□□ -0.61
PTPN7-204	ENST00000462815	CERCAM	Q5T4B2	595 aa		11.25	□□□□□ -0.61
PTPN7-204	ENST00000462815	WDR59	Q6PJI9	974 aa		11.25	□□□□□ -0.61
PTPN7-204	ENST00000462815	MON1B	Q7L1V2	547 aa		11.25	□□□□□ -0.61
PTPN7-204	ENST00000462815	RAB11FIP2	Q7L804	512 aa		11.25	□□□□□ -0.61
PTPN7-204	ENST00000462815	PHF13	Q86YI8	300 aa	Predicted RBP	11.25	□□□□□ -0.61
PTPN7-204	ENST00000462815	HID1	Q8IV36	788 aa		11.25	□□□□□ -0.61
PTPN7-204	ENST00000462815	SLITRK4	Q8IW52	837 aa		11.25	□□□□□ -0.61
PTPN7-204	ENST00000462815	PELI3	Q8N2H9	469 aa		11.25	□□□□□ -0.61
PTPN7-204	ENST00000462815	FBXO39	Q8N4B4	442 aa		11.25	□□□□□ -0.61
PTPN7-204	ENST00000462815	OR1E3	Q8WZA6	343 aa		11.25	□□□□□ -0.61
PTPN7-204	ENST00000462815	ECHDC3	Q96DC8	303 aa		11.25	□□□□□ -0.61
PTPN7-204	ENST00000462815	GFM1	Q96RP9	751 aa	Known RBP	11.25	□□□□□ -0.61
PTPN7-204	ENST00000462815	LRRN3	Q9H3W5	708 aa		11.25	□□□□□ -0.61
PTPN7-204	ENST00000462815	CLSTN2	Q9H4D0	955 aa		11.25	□□□□□ -0.61
PTPN7-204	ENST00000462815	EPB41L5	Q9HCM4	733 aa		11.25	□□□□□ -0.61
PTPN7-204	ENST00000462815	FGF22	Q9HCT0	170 aa		11.25	□□□□□ -0.61
PTPN7-204	ENST00000462815	STARD5	Q9NSY2	213 aa		11.25	□□□□□ -0.61
PTPN7-204	ENST00000462815	GULP1	Q9UBP9	304 aa		11.25	□□□□□ -0.61
PTPN7-204	ENST00000462815	FZD10	Q9ULW2	581 aa		11.25	□□□□□ -0.61
PTPN7-204	ENST00000462815	TMEM202	A6NGA9	273 aa		11.24	□□□□□ -0.61
PTPN7-204	ENST00000462815		J3KR12	359 aa		11.24	□□□□□ -0.61
PTPN7-204	ENST00000462815	TERT	O14746	1132 aa	Known RBP	11.24	□□□□□ -0.61
PTPN7-204	ENST00000462815	NVL	O15381	856 aa	Known RBP	11.24	□□□□□ -0.61
PTPN7-204	ENST00000462815	RASGRP1	O95267	797 aa		11.24	□□□□□ -0.61
PTPN7-204	ENST00000462815	WISP1	O95388	367 aa		11.24	□□□□□ -0.61
PTPN7-204	ENST00000462815	PRKCG	P05129	697 aa		11.24	□□□□□ -0.61
PTPN7-204	ENST00000462815	KRT3	P12035	628 aa		11.24	□□□□□ -0.61
PTPN7-204	ENST00000462815	ITIH1	P19827	911 aa		11.24	□□□□□ -0.61
PTPN7-204	ENST00000462815	GPD1	P21695	349 aa		11.24	□□□□□ -0.61
PTPN7-204	ENST00000462815	EPHB2	P29323	1055 aa		11.24	□□□□□ -0.61
PTPN7-204	ENST00000462815	SOX5	P35711	763 aa		11.24	□□□□□ -0.61
PTPN7-204	ENST00000462815	BLK	P51451	505 aa		11.24	□□□□□ -0.61
PTPN7-204	ENST00000462815	INHBC	P55103	352 aa		11.24	□□□□□ -0.61
PTPN7-204	ENST00000462815	KIAA1024L	P59773	190 aa		11.24	□□□□□ -0.61
PTPN7-204	ENST00000462815	ELP6	Q0PNE2	266 aa		11.24	□□□□□ -0.61
PTPN7-204	ENST00000462815	MTM1	Q13496	603 aa		11.24	□□□□□ -0.61
PTPN7-204	ENST00000462815	HLTF	Q14527	1009 aa	Known RBP eCLIP	11.24	□□□□□ -0.61
PTPN7-204	ENST00000462815	CLEC16A	Q2KHT3	1053 aa		11.24	□□□□□ -0.61
PTPN7-204	ENST00000462815	PARP15	Q460N3	678 aa		11.24	□□□□□ -0.61
PTPN7-204	ENST00000462815	CDKAL1	Q5VV42	579 aa		11.24	□□□□□ -0.61
PTPN7-204	ENST00000462815	ENPP7	Q6UWV6	458 aa		11.24	□□□□□ -0.61
PTPN7-204	ENST00000462815	CLEC17A	Q6ZS10	378 aa		11.24	□□□□□ -0.61
PTPN7-204	ENST00000462815	SPRED1	Q7Z699	444 aa		11.24	□□□□□ -0.61
PTPN7-204	ENST00000462815	SLFN11	Q7Z7L1	901 aa		11.24	□□□□□ -0.61
PTPN7-204	ENST00000462815	C17orf82	Q86X59	251 aa	Predicted RBP	11.24	□□□□□ -0.61
PTPN7-204	ENST00000462815	DTX1	Q86Y01	620 aa		11.24	□□□□□ -0.61
PTPN7-204	ENST00000462815	DNAAF5	Q86Y56	855 aa		11.24	□□□□□ -0.61
PTPN7-204	ENST00000462815	C3orf20	Q8ND61	904 aa		11.24	□□□□□ -0.61
PTPN7-204	ENST00000462815	WDR92	Q96MX6	357 aa		11.24	□□□□□ -0.61
PTPN7-204	ENST00000462815	SUV39H2	Q9H5I1	410 aa		11.24	□□□□□ -0.61
PTPN7-204	ENST00000462815	CLMP	Q9H6B4	373 aa		11.24	□□□□□ -0.61
PTPN7-204	ENST00000462815	TAB2	Q9NYJ8	693 aa		11.24	□□□□□ -0.61
PTPN7-204	ENST00000462815	FOXJ2	Q9P0K8	574 aa		11.24	□□□□□ -0.61
PTPN7-204	ENST00000462815	GPR34	Q9UPC5	381 aa		11.24	□□□□□ -0.61
PTPN7-204	ENST00000462815	SIK3	Q9Y2K2	1263 aa		11.24	□□□□□ -0.61
PTPN7-204	ENST00000462815	LOXL2	Q9Y4K0	774 aa		11.24	□□□□□ -0.61
PTPN7-204	ENST00000462815	AHCTF1	Q8WYP5	2266 aa		11.24	□□□□□ -0.61
PTPN7-204	ENST00000462815	PTPN13	Q12923	2485 aa		11.24	□□□□□ -0.61
PTPN7-204	ENST00000462815	CFAP69	A5D8W1	941 aa		11.23	□□□□□ -0.61
PTPN7-204	ENST00000462815	SIGLEC16	A6NMB1	481 aa		11.23	□□□□□ -0.61
PTPN7-204	ENST00000462815	C9orf172	C9J069	976 aa		11.23	□□□□□ -0.61
PTPN7-204	ENST00000462815	SLC28A2	O43868	658 aa		11.23	□□□□□ -0.61
PTPN7-204	ENST00000462815	PRAMEF11	O60813	436 aa		11.23	□□□□□ -0.61
PTPN7-204	ENST00000462815	HOXC4	P09017	264 aa	Predicted RBP	11.23	□□□□□ -0.61
PTPN7-204	ENST00000462815	LIPC	P11150	499 aa		11.23	□□□□□ -0.61
PTPN7-204	ENST00000462815	PNLIP	P16233	465 aa		11.23	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms