RNA–Protein interactions for RNA: ENST00000461228.1

DNMT3A-207, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-207ENST00000461228 CMKLR1Q99788 373 aa14.68□□□□□ -0.06
DNMT3A-207ENST00000461228 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.68□□□□□ -0.06
DNMT3A-207ENST00000461228 STK33Q9BYT3 514 aa14.68□□□□□ -0.06
DNMT3A-207ENST00000461228 FAM117AQ9C073 453 aa14.68□□□□□ -0.06
DNMT3A-207ENST00000461228 ADNPQ9H2P0 1102 aa14.68□□□□□ -0.06
DNMT3A-207ENST00000461228 LRRN3Q9H3W5 708 aa14.68□□□□□ -0.06
DNMT3A-207ENST00000461228 NOL6Q9H6R4 1146 aaKnown RBP14.68□□□□□ -0.06
DNMT3A-207ENST00000461228 EPB41L5Q9HCM4 733 aa14.68□□□□□ -0.06
DNMT3A-207ENST00000461228 TUBD1Q9UJT1 453 aa14.68□□□□□ -0.06
DNMT3A-207ENST00000461228 GPR34Q9UPC5 381 aa14.68□□□□□ -0.06
DNMT3A-207ENST00000461228 LOXL2Q9Y4K0 774 aa14.68□□□□□ -0.06
DNMT3A-207ENST00000461228 PCDHGA4Q9Y5G9 962 aa14.68□□□□□ -0.06
DNMT3A-207ENST00000461228 GOLGA8SH3BPF8 625 aa14.67□□□□□ -0.06
DNMT3A-207ENST00000461228 MMP20O60882 483 aa14.67□□□□□ -0.06
DNMT3A-207ENST00000461228 PLEKP08567 350 aaPredicted RBP14.67□□□□□ -0.06
DNMT3A-207ENST00000461228 CTSEP14091 401 aa14.67□□□□□ -0.06
DNMT3A-207ENST00000461228 ITGB6P18564 788 aa14.67□□□□□ -0.06
DNMT3A-207ENST00000461228 ERCC5P28715 1186 aaPredicted RBP14.67□□□□□ -0.06
DNMT3A-207ENST00000461228 GKP32189 559 aa14.67□□□□□ -0.06
DNMT3A-207ENST00000461228 SRP54P61011 504 aaKnown RBP14.67□□□□□ -0.06
DNMT3A-207ENST00000461228 ATP11AP98196 1134 aa14.67□□□□□ -0.06
DNMT3A-207ENST00000461228 CDR2Q01850 454 aa14.67□□□□□ -0.06
DNMT3A-207ENST00000461228 SERINC3Q13530 473 aa14.67□□□□□ -0.06
DNMT3A-207ENST00000461228 C1orf61Q13536 156 aa14.67□□□□□ -0.06
DNMT3A-207ENST00000461228 HLTFQ14527 1009 aaKnown RBP eCLIP14.67□□□□□ -0.06
DNMT3A-207ENST00000461228 CT47A1Q5JQC4 288 aaPredicted RBP14.67□□□□□ -0.06
DNMT3A-207ENST00000461228 ATXN7L2Q5T6C5 722 aaPredicted RBP14.67□□□□□ -0.06
DNMT3A-207ENST00000461228 NAA35Q5VZE5 725 aa14.67□□□□□ -0.06
DNMT3A-207ENST00000461228 RWDD4Q6NW29 188 aaKnown RBP14.67□□□□□ -0.06
DNMT3A-207ENST00000461228 EXD3Q8N9H8 876 aa14.67□□□□□ -0.06
DNMT3A-207ENST00000461228 C3orf20Q8ND61 904 aa14.67□□□□□ -0.06
DNMT3A-207ENST00000461228 ECHDC3Q96DC8 303 aa14.67□□□□□ -0.06
DNMT3A-207ENST00000461228 TUBGCP2Q9BSJ2 902 aa14.67□□□□□ -0.06
DNMT3A-207ENST00000461228 PDFQ9HBH1 243 aa14.67□□□□□ -0.06
DNMT3A-207ENST00000461228 KCTD5Q9NXV2 234 aa14.67□□□□□ -0.06
DNMT3A-207ENST00000461228 LHX3Q9UBR4 397 aa14.67□□□□□ -0.06
DNMT3A-207ENST00000461228 IL17BQ9UHF5 180 aa14.67□□□□□ -0.06
DNMT3A-207ENST00000461228 DNAI1Q9UI46 699 aa14.67□□□□□ -0.06
DNMT3A-207ENST00000461228 ATP8A1Q9Y2Q0 1164 aa14.67□□□□□ -0.06
DNMT3A-207ENST00000461228 ACTL7AQ9Y615 435 aa14.67□□□□□ -0.06
DNMT3A-207ENST00000461228 SPTAN1Q13813 2472 aaKnown RBP14.66□□□□□ -0.06
DNMT3A-207ENST00000461228 FAM72CH0Y354 149 aa14.66□□□□□ -0.06
DNMT3A-207ENST00000461228 SUV39H1O43463 412 aa14.66□□□□□ -0.06
DNMT3A-207ENST00000461228 PPFIA2O75334 1257 aa14.66□□□□□ -0.06
DNMT3A-207ENST00000461228 CELA2BP08218 269 aaPredicted RBP14.66□□□□□ -0.06
DNMT3A-207ENST00000461228 TIMP2P16035 220 aa14.66□□□□□ -0.06
DNMT3A-207ENST00000461228 EEF1GP26641 437 aaKnown RBP14.66□□□□□ -0.06
DNMT3A-207ENST00000461228 TRIM23P36406 574 aa14.66□□□□□ -0.06
DNMT3A-207ENST00000461228 C14orf28Q4W4Y0 310 aa14.66□□□□□ -0.06
DNMT3A-207ENST00000461228 EFHC2Q5JST6 749 aa14.66□□□□□ -0.06
DNMT3A-207ENST00000461228 FAM72AQ5TYM5 149 aa14.66□□□□□ -0.06
DNMT3A-207ENST00000461228 FAM72DQ6L9T8 149 aa14.66□□□□□ -0.06
DNMT3A-207ENST00000461228 USP53Q70EK8 1073 aa14.66□□□□□ -0.06
DNMT3A-207ENST00000461228 PRICKLE2Q7Z3G6 844 aa14.66□□□□□ -0.06
DNMT3A-207ENST00000461228 C17orf82Q86X59 251 aaPredicted RBP14.66□□□□□ -0.06
DNMT3A-207ENST00000461228 FAM72BQ86X60 149 aa14.66□□□□□ -0.06
DNMT3A-207ENST00000461228 HID1Q8IV36 788 aa14.66□□□□□ -0.06
DNMT3A-207ENST00000461228 EMC1Q8N766 993 aa14.66□□□□□ -0.06
DNMT3A-207ENST00000461228 ZSCAN1Q8NBB4 408 aa14.66□□□□□ -0.06
DNMT3A-207ENST00000461228 KIAA1524Q8TCG1 905 aa14.66□□□□□ -0.06
DNMT3A-207ENST00000461228 FAM172AQ8WUF8 416 aa14.66□□□□□ -0.06
DNMT3A-207ENST00000461228 RXFP2Q8WXD0 754 aa14.66□□□□□ -0.06
DNMT3A-207ENST00000461228 APOOQ9BUR5 198 aa14.66□□□□□ -0.06
DNMT3A-207ENST00000461228 CATSPERBQ9H7T0 1116 aa14.66□□□□□ -0.06
DNMT3A-207ENST00000461228 DACH1Q9UI36 760 aa14.66□□□□□ -0.06
DNMT3A-207ENST00000461228 PCDHGA3Q9Y5H0 932 aa14.66□□□□□ -0.06
DNMT3A-207ENST00000461228 USP9YO00507 2555 aaPredicted RBP14.66□□□□□ -0.06
DNMT3A-207ENST00000461228 ZW10O43264 779 aa14.65□□□□□ -0.06
DNMT3A-207ENST00000461228 BUB1O43683 1085 aa14.65□□□□□ -0.06
DNMT3A-207ENST00000461228 MMEP08473 750 aa14.65□□□□□ -0.06
DNMT3A-207ENST00000461228 XPAP23025 273 aaPredicted RBP14.65□□□□□ -0.06
DNMT3A-207ENST00000461228 EPHB2P29323 1055 aa14.65□□□□□ -0.06
DNMT3A-207ENST00000461228 UBE2HP62256 183 aa14.65□□□□□ -0.06
DNMT3A-207ENST00000461228 FMO1Q01740 532 aa14.65□□□□□ -0.06
DNMT3A-207ENST00000461228 NFATC3Q12968 1075 aa14.65□□□□□ -0.06
DNMT3A-207ENST00000461228 TRA2AQ13595 282 aaKnown RBP eCLIP14.65□□□□□ -0.06
DNMT3A-207ENST00000461228 CDO1Q16878 200 aa14.65□□□□□ -0.06
DNMT3A-207ENST00000461228 C15orf59Q2T9L4 293 aaPredicted RBP14.65□□□□□ -0.06
DNMT3A-207ENST00000461228 FOXR1Q6PIV2 292 aa14.65□□□□□ -0.06
DNMT3A-207ENST00000461228 CCDC185Q8N715 623 aa14.65□□□□□ -0.06
DNMT3A-207ENST00000461228 OR56A4Q8NGH8 313 aa14.65□□□□□ -0.06
DNMT3A-207ENST00000461228 HMCESQ96FZ2 354 aa14.65□□□□□ -0.06
DNMT3A-207ENST00000461228 NCAPGQ9BPX3 1015 aa14.65□□□□□ -0.06
DNMT3A-207ENST00000461228 WRAP53Q9BUR4 548 aaKnown RBP14.65□□□□□ -0.06
DNMT3A-207ENST00000461228 SYNDIG1Q9H7V2 258 aa14.65□□□□□ -0.06
DNMT3A-207ENST00000461228 PCDH12Q9NPG4 1184 aa14.65□□□□□ -0.06
DNMT3A-207ENST00000461228 GEMIN8Q9NWZ8 242 aaKnown RBP14.65□□□□□ -0.06
DNMT3A-207ENST00000461228 STMND1H3BQB6 276 aa14.64□□□□□ -0.07
DNMT3A-207ENST00000461228 CACNB4O00305 520 aaPredicted RBP14.64□□□□□ -0.07
DNMT3A-207ENST00000461228 PDE2AO00408 941 aaPredicted RBP14.64□□□□□ -0.07
DNMT3A-207ENST00000461228 CPNE6O95741 557 aa14.64□□□□□ -0.07
DNMT3A-207ENST00000461228 TNFP01375 233 aa14.64□□□□□ -0.07
DNMT3A-207ENST00000461228 CALB1P05937 261 aa14.64□□□□□ -0.07
DNMT3A-207ENST00000461228 UNGP13051 313 aaPredicted RBP14.64□□□□□ -0.07
DNMT3A-207ENST00000461228 TEAD1P28347 426 aa14.64□□□□□ -0.07
DNMT3A-207ENST00000461228 SERPINA4P29622 427 aa14.64□□□□□ -0.07
DNMT3A-207ENST00000461228 STAT1P42224 750 aa14.64□□□□□ -0.07
DNMT3A-207ENST00000461228 NDST2P52849 883 aa14.64□□□□□ -0.07
DNMT3A-207ENST00000461228 JAM2P57087 298 aa14.64□□□□□ -0.07
DNMT3A-207ENST00000461228 CCL7P80098 99 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms