RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 HGSO14964 777 aaPredicted RBP17.38■□□□□ 0.37
TOP3A-202ENST00000461127 NUDT21O43809 227 aaKnown RBP17.38■□□□□ 0.37
TOP3A-202ENST00000461127 CPNE6O95741 557 aa17.38■□□□□ 0.37
TOP3A-202ENST00000461127 LIFP15018 202 aa17.38■□□□□ 0.37
TOP3A-202ENST00000461127 XPAP23025 273 aaPredicted RBP17.38■□□□□ 0.37
TOP3A-202ENST00000461127 SULT1E1P49888 294 aa17.38■□□□□ 0.37
TOP3A-202ENST00000461127 SLC6A3Q01959 620 aa17.38■□□□□ 0.37
TOP3A-202ENST00000461127 MYL5Q02045 173 aa17.38■□□□□ 0.37
TOP3A-202ENST00000461127 DEUP1Q05D60 604 aa17.38■□□□□ 0.37
TOP3A-202ENST00000461127 RAD51Q06609 339 aa17.38■□□□□ 0.37
TOP3A-202ENST00000461127 GSE1Q14687 1217 aa17.38■□□□□ 0.37
TOP3A-202ENST00000461127 MYLK3Q32MK0 819 aa17.38■□□□□ 0.37
TOP3A-202ENST00000461127 EFHC2Q5JST6 749 aa17.38■□□□□ 0.37
TOP3A-202ENST00000461127 LRRC73Q5JTD7 316 aa17.38■□□□□ 0.37
TOP3A-202ENST00000461127 OGFOD3Q6PK18 319 aa17.38■□□□□ 0.37
TOP3A-202ENST00000461127 GDPD4Q6W3E5 623 aa17.38■□□□□ 0.37
TOP3A-202ENST00000461127 ENOSF1Q7L5Y1 443 aa17.38■□□□□ 0.37
TOP3A-202ENST00000461127 DRC7Q8IY82 874 aa17.38■□□□□ 0.37
TOP3A-202ENST00000461127 WDR92Q96MX6 357 aa17.38■□□□□ 0.37
TOP3A-202ENST00000461127 NPY6RQ99463 290 aa17.38■□□□□ 0.37
TOP3A-202ENST00000461127 APOOQ9BUR5 198 aa17.38■□□□□ 0.37
TOP3A-202ENST00000461127 RBSNQ9H1K0 784 aa17.38■□□□□ 0.37
TOP3A-202ENST00000461127 ACP6Q9NPH0 428 aa17.38■□□□□ 0.37
TOP3A-202ENST00000461127 ANLNQ9NQW6 1124 aa17.38■□□□□ 0.37
TOP3A-202ENST00000461127 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.38■□□□□ 0.37
TOP3A-202ENST00000461127 HPCAL4Q9UM19 191 aa17.38■□□□□ 0.37
TOP3A-202ENST00000461127 PCDHGA3Q9Y5H0 932 aa17.38■□□□□ 0.37
TOP3A-202ENST00000461127 TEP1Q99973 2627 aaKnown RBP17.37■□□□□ 0.37
TOP3A-202ENST00000461127 CCL4P13236 92 aa17.37■□□□□ 0.37
TOP3A-202ENST00000461127 UGT1A3P35503 534 aa17.37■□□□□ 0.37
TOP3A-202ENST00000461127 TMPRSS9Q7Z410 1059 aa17.37■□□□□ 0.37
TOP3A-202ENST00000461127 LUZP1Q86V48 1076 aa17.37■□□□□ 0.37
TOP3A-202ENST00000461127 PASD1Q8IV76 773 aa17.37■□□□□ 0.37
TOP3A-202ENST00000461127 CACNA2D3Q8IZS8 1091 aa17.37■□□□□ 0.37
TOP3A-202ENST00000461127 ZNF397Q8NF99 534 aaPredicted RBP17.37■□□□□ 0.37
TOP3A-202ENST00000461127 ENOX1Q8TC92 643 aaKnown RBP17.37■□□□□ 0.37
TOP3A-202ENST00000461127 ARHGEF2Q92974 986 aaKnown RBP17.37■□□□□ 0.37
TOP3A-202ENST00000461127 PGAP3Q96FM1 320 aaPredicted RBP17.37■□□□□ 0.37
TOP3A-202ENST00000461127 HAPLN3Q96S86 360 aa17.37■□□□□ 0.37
TOP3A-202ENST00000461127 INTS2Q9H0H0 1204 aaKnown RBP17.37■□□□□ 0.37
TOP3A-202ENST00000461127 RDH14Q9HBH5 336 aa17.37■□□□□ 0.37
TOP3A-202ENST00000461127 PLEKHB1Q9UF11 243 aaPredicted RBP17.37■□□□□ 0.37
TOP3A-202ENST00000461127 ACTL7AQ9Y615 435 aa17.37■□□□□ 0.37
TOP3A-202ENST00000461127 DGKBQ9Y6T7 804 aa17.37■□□□□ 0.37
TOP3A-202ENST00000461127 RP1L1Q8IWN7 2480 aaPredicted RBP17.37■□□□□ 0.37
TOP3A-202ENST00000461127 B4DGG1 531 aa17.36■□□□□ 0.37
TOP3A-202ENST00000461127 I6L893 689 aaPredicted RBP17.36■□□□□ 0.37
TOP3A-202ENST00000461127 CD160O95971 181 aa17.36■□□□□ 0.37
TOP3A-202ENST00000461127 USP8P40818 1118 aa17.36■□□□□ 0.37
TOP3A-202ENST00000461127 RNASE9P60153 205 aaKnown RBP17.36■□□□□ 0.37
TOP3A-202ENST00000461127 ELP6Q0PNE2 266 aa17.36■□□□□ 0.37
TOP3A-202ENST00000461127 SEPT6Q14141 434 aa17.36■□□□□ 0.37
TOP3A-202ENST00000461127 HLTFQ14527 1009 aaKnown RBP eCLIP17.36■□□□□ 0.37
TOP3A-202ENST00000461127 INPP5AQ14642 412 aa17.36■□□□□ 0.37
TOP3A-202ENST00000461127 CLPPQ16740 277 aaPredicted RBP17.36■□□□□ 0.37
TOP3A-202ENST00000461127 WSCD2Q2TBF2 565 aa17.36■□□□□ 0.37
TOP3A-202ENST00000461127 AMZ1Q400G9 498 aa17.36■□□□□ 0.37
TOP3A-202ENST00000461127 OTUD1Q5VV17 481 aaPredicted RBP17.36■□□□□ 0.37
TOP3A-202ENST00000461127 ZDHHC17Q8IUH5 632 aa17.36■□□□□ 0.37
TOP3A-202ENST00000461127 WDTC1Q8N5D0 677 aa17.36■□□□□ 0.37
TOP3A-202ENST00000461127 KIAA1524Q8TCG1 905 aa17.36■□□□□ 0.37
TOP3A-202ENST00000461127 MIB2Q96AX9 1013 aa17.36■□□□□ 0.37
TOP3A-202ENST00000461127 FAM81BQ96LP2 452 aa17.36■□□□□ 0.37
TOP3A-202ENST00000461127 ASPSCR1Q9BZE9 553 aa17.36■□□□□ 0.37
TOP3A-202ENST00000461127 DPEP2Q9H4A9 486 aa17.36■□□□□ 0.37
TOP3A-202ENST00000461127 ZNF212Q9UDV6 495 aa17.36■□□□□ 0.37
TOP3A-202ENST00000461127 OR1A2Q9Y585 309 aa17.36■□□□□ 0.37
TOP3A-202ENST00000461127 LRP4O75096 1905 aa17.36■□□□□ 0.37
TOP3A-202ENST00000461127 ERBB2P04626 1255 aa17.35■□□□□ 0.37
TOP3A-202ENST00000461127 ACVRL1P37023 503 aa17.35■□□□□ 0.37
TOP3A-202ENST00000461127 SUOXP51687 545 aa17.35■□□□□ 0.37
TOP3A-202ENST00000461127 B4GALNT1Q00973 533 aa17.35■□□□□ 0.37
TOP3A-202ENST00000461127 KLRB1Q12918 225 aa17.35■□□□□ 0.37
TOP3A-202ENST00000461127 IQCB1Q15051 598 aa17.35■□□□□ 0.37
TOP3A-202ENST00000461127 LACTB2Q53H82 288 aaPredicted RBP17.35■□□□□ 0.37
TOP3A-202ENST00000461127 IRF2BP1Q8IU81 584 aa17.35■□□□□ 0.37
TOP3A-202ENST00000461127 C1orf131Q8NDD1 294 aaKnown RBP17.35■□□□□ 0.37
TOP3A-202ENST00000461127 KIAA1143Q96AT1 154 aaPredicted RBP17.35■□□□□ 0.37
TOP3A-202ENST00000461127 PDXPQ96GD0 296 aa17.35■□□□□ 0.37
TOP3A-202ENST00000461127 SLC45A3Q96JT2 553 aa17.35■□□□□ 0.37
TOP3A-202ENST00000461127 GDAP1L1Q96MZ0 367 aa17.35■□□□□ 0.37
TOP3A-202ENST00000461127 TMPRSS4Q9NRS4 437 aa17.35■□□□□ 0.37
TOP3A-202ENST00000461127 DKK3Q9UBP4 350 aa17.35■□□□□ 0.37
TOP3A-202ENST00000461127 PCDHGC3Q9UN70 934 aa17.35■□□□□ 0.37
TOP3A-202ENST00000461127 COQ6Q9Y2Z9 468 aa17.35■□□□□ 0.37
TOP3A-202ENST00000461127 FGFR1OPO95684 399 aaKnown RBP17.34■□□□□ 0.37
TOP3A-202ENST00000461127 FGF3P11487 239 aaPredicted RBP17.34■□□□□ 0.37
TOP3A-202ENST00000461127 TFE3P19532 575 aaPredicted RBP17.34■□□□□ 0.37
TOP3A-202ENST00000461127 ALDH4A1P30038 563 aa17.34■□□□□ 0.37
TOP3A-202ENST00000461127 CD97P48960 835 aa17.34■□□□□ 0.37
TOP3A-202ENST00000461127 BIRC2Q13490 618 aa17.34■□□□□ 0.37
TOP3A-202ENST00000461127 MTM1Q13496 603 aa17.34■□□□□ 0.37
TOP3A-202ENST00000461127 TRA2AQ13595 282 aaKnown RBP eCLIP17.34■□□□□ 0.37
TOP3A-202ENST00000461127 SLC25A52Q3SY17 297 aa17.34■□□□□ 0.37
TOP3A-202ENST00000461127 TMEM52BQ4KMG9 183 aa17.34■□□□□ 0.37
TOP3A-202ENST00000461127 ATXN7L2Q5T6C5 722 aaPredicted RBP17.34■□□□□ 0.37
TOP3A-202ENST00000461127 SPECC1LQ69YQ0 1117 aa17.34■□□□□ 0.37
TOP3A-202ENST00000461127 HIST2H2BCQ6DN03 193 aa17.34■□□□□ 0.37
TOP3A-202ENST00000461127 TTI2Q6NXR4 508 aa17.34■□□□□ 0.37
TOP3A-202ENST00000461127 AGBL5Q8NDL9 886 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms