RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 NEMP1O14524 444 aa13.37□□□□□ -0.27
RAB11FIP3-207ENST00000461009 CST8O60676 142 aa13.37□□□□□ -0.27
RAB11FIP3-207ENST00000461009 UGT2B4P06133 528 aa13.37□□□□□ -0.27
RAB11FIP3-207ENST00000461009 C1SP09871 688 aa13.37□□□□□ -0.27
RAB11FIP3-207ENST00000461009 TGM2P21980 687 aa13.37□□□□□ -0.27
RAB11FIP3-207ENST00000461009 HNRNPA2B1P22626 353 aaKnown RBP13.37□□□□□ -0.27
RAB11FIP3-207ENST00000461009 XPAP23025 273 aaPredicted RBP13.37□□□□□ -0.27
RAB11FIP3-207ENST00000461009 CES1P23141 567 aa13.37□□□□□ -0.27
RAB11FIP3-207ENST00000461009 RXRGP48443 463 aa13.37□□□□□ -0.27
RAB11FIP3-207ENST00000461009 SUOXP51687 545 aa13.37□□□□□ -0.27
RAB11FIP3-207ENST00000461009 DYNLT1P63172 113 aa13.37□□□□□ -0.27
RAB11FIP3-207ENST00000461009 RPS21P63220 83 aaKnown RBP13.37□□□□□ -0.27
RAB11FIP3-207ENST00000461009 BCL2L1Q07817 233 aa13.37□□□□□ -0.27
RAB11FIP3-207ENST00000461009 SLC10A7Q0GE19 358 aa13.37□□□□□ -0.27
RAB11FIP3-207ENST00000461009 SLC10A2Q12908 348 aaPredicted RBP13.37□□□□□ -0.27
RAB11FIP3-207ENST00000461009 PPP2R5EQ16537 467 aa13.37□□□□□ -0.27
RAB11FIP3-207ENST00000461009 RALGPS1Q5JS13 557 aa13.37□□□□□ -0.27
RAB11FIP3-207ENST00000461009 CFAP58Q5T655 872 aa13.37□□□□□ -0.27
RAB11FIP3-207ENST00000461009 CCDC181Q5TID7 509 aa13.37□□□□□ -0.27
RAB11FIP3-207ENST00000461009 KIAA1161Q6NSJ0 714 aa13.37□□□□□ -0.27
RAB11FIP3-207ENST00000461009 CCNI2Q6ZMN8 369 aaPredicted RBP13.37□□□□□ -0.27
RAB11FIP3-207ENST00000461009 TMPRSS7Q7RTY8 843 aa13.37□□□□□ -0.27
RAB11FIP3-207ENST00000461009 TTC7BQ86TV6 843 aa13.37□□□□□ -0.27
RAB11FIP3-207ENST00000461009 GATAD2AQ86YP4 633 aa13.37□□□□□ -0.27
RAB11FIP3-207ENST00000461009 PAF1Q8N7H5 531 aa13.37□□□□□ -0.27
RAB11FIP3-207ENST00000461009 SAP25Q8TEE9 199 aa13.37□□□□□ -0.27
RAB11FIP3-207ENST00000461009 KRT35Q92764 455 aa13.37□□□□□ -0.27
RAB11FIP3-207ENST00000461009 P3H4Q92791 437 aa13.37□□□□□ -0.27
RAB11FIP3-207ENST00000461009 EXOC2Q96KP1 924 aa13.37□□□□□ -0.27
RAB11FIP3-207ENST00000461009 CNDP2Q96KP4 475 aaKnown RBP13.37□□□□□ -0.27
RAB11FIP3-207ENST00000461009 KLHL32Q96NJ5 620 aa13.37□□□□□ -0.27
RAB11FIP3-207ENST00000461009 ALS2CR12Q96Q35 445 aa13.37□□□□□ -0.27
RAB11FIP3-207ENST00000461009 SUV39H2Q9H5I1 410 aa13.37□□□□□ -0.27
RAB11FIP3-207ENST00000461009 ATP13A3Q9H7F0 1226 aa13.37□□□□□ -0.27
RAB11FIP3-207ENST00000461009 DKK3Q9UBP4 350 aa13.37□□□□□ -0.27
RAB11FIP3-207ENST00000461009 PLXNA2O75051 1894 aa13.37□□□□□ -0.27
RAB11FIP3-207ENST00000461009 TMEM131Q92545 1883 aa13.36□□□□□ -0.27
RAB11FIP3-207ENST00000461009 hCG_1818297A0A087WSY0 165 aa13.36□□□□□ -0.27
RAB11FIP3-207ENST00000461009 A0A0U1RQJ8 604 aa13.36□□□□□ -0.27
RAB11FIP3-207ENST00000461009 A0A1W2PQ67 120 aa13.36□□□□□ -0.27
RAB11FIP3-207ENST00000461009 C16orf96A6NNT2 1141 aa13.36□□□□□ -0.27
RAB11FIP3-207ENST00000461009 ENC1O14682 589 aa13.36□□□□□ -0.27
RAB11FIP3-207ENST00000461009 WNT9AO14904 365 aa13.36□□□□□ -0.27
RAB11FIP3-207ENST00000461009 MAP3K6O95382 1288 aa13.36□□□□□ -0.27
RAB11FIP3-207ENST00000461009 PEX11BO96011 259 aa13.36□□□□□ -0.27
RAB11FIP3-207ENST00000461009 THEGLP0DJG4 465 aa13.36□□□□□ -0.27
RAB11FIP3-207ENST00000461009 KRT10P13645 584 aa13.36□□□□□ -0.27
RAB11FIP3-207ENST00000461009 ADRB3P13945 408 aa13.36□□□□□ -0.27
RAB11FIP3-207ENST00000461009 CCNB1P14635 433 aa13.36□□□□□ -0.27
RAB11FIP3-207ENST00000461009 EPHA8P29322 1005 aaPredicted RBP13.36□□□□□ -0.27
RAB11FIP3-207ENST00000461009 SERPINA4P29622 427 aa13.36□□□□□ -0.27
RAB11FIP3-207ENST00000461009 GKP32189 559 aa13.36□□□□□ -0.27
RAB11FIP3-207ENST00000461009 PEX5P50542 639 aa13.36□□□□□ -0.27
RAB11FIP3-207ENST00000461009 TAS2R38P59533 333 aa13.36□□□□□ -0.27
RAB11FIP3-207ENST00000461009 AP1S1P61966 158 aa13.36□□□□□ -0.27
RAB11FIP3-207ENST00000461009 POLR2LP62875 67 aaKnown RBP13.36□□□□□ -0.27
RAB11FIP3-207ENST00000461009 PPIDQ08752 370 aaKnown RBP13.36□□□□□ -0.27
RAB11FIP3-207ENST00000461009 SGCGQ13326 291 aa13.36□□□□□ -0.27
RAB11FIP3-207ENST00000461009 BRAT1Q6PJG6 821 aa13.36□□□□□ -0.27
RAB11FIP3-207ENST00000461009 DCP2Q8IU60 420 aaKnown RBP13.36□□□□□ -0.27
RAB11FIP3-207ENST00000461009 CCDC13Q8IYE1 715 aa13.36□□□□□ -0.27
RAB11FIP3-207ENST00000461009 TEX26Q8N6G2 289 aa13.36□□□□□ -0.27
RAB11FIP3-207ENST00000461009 EID2Q8N6I1 236 aa13.36□□□□□ -0.27
RAB11FIP3-207ENST00000461009 MAML1Q92585 1016 aa13.36□□□□□ -0.27
RAB11FIP3-207ENST00000461009 NUDCD1Q96RS6 583 aa13.36□□□□□ -0.27
RAB11FIP3-207ENST00000461009 FERMT1Q9BQL6 677 aa13.36□□□□□ -0.27
RAB11FIP3-207ENST00000461009 TMEM121BQ9BXQ6 578 aaPredicted RBP13.36□□□□□ -0.27
RAB11FIP3-207ENST00000461009 CCDC86Q9H6F5 360 aaKnown RBP13.36□□□□□ -0.27
RAB11FIP3-207ENST00000461009 NT5MQ9NPB1 228 aa13.36□□□□□ -0.27
RAB11FIP3-207ENST00000461009 SCUBE2Q9NQ36 999 aa13.36□□□□□ -0.27
RAB11FIP3-207ENST00000461009 LZTFL1Q9NQ48 299 aa13.36□□□□□ -0.27
RAB11FIP3-207ENST00000461009 RBM22Q9NW64 420 aaKnown RBP eCLIP13.36□□□□□ -0.279e-9■■■■■ 34.9
RAB11FIP3-207ENST00000461009 PPP2R2CQ9Y2T4 447 aa13.36□□□□□ -0.27
RAB11FIP3-207ENST00000461009 PCDHGA1Q9Y5H4 931 aa13.36□□□□□ -0.27
RAB11FIP3-207ENST00000461009 CACNA1BQ00975 2339 aa13.36□□□□□ -0.27
RAB11FIP3-207ENST00000461009 TRPM6Q9BX84 2022 aa13.35□□□□□ -0.27
RAB11FIP3-207ENST00000461009 ANKRD36A6QL64 1941 aa13.35□□□□□ -0.27
RAB11FIP3-207ENST00000461009 INSIG1O15503 277 aa13.35□□□□□ -0.27
RAB11FIP3-207ENST00000461009 ZSCAN12O43309 604 aa13.35□□□□□ -0.27
RAB11FIP3-207ENST00000461009 TSPAN6O43657 245 aa13.35□□□□□ -0.27
RAB11FIP3-207ENST00000461009 AP1G1O43747 822 aa13.35□□□□□ -0.27
RAB11FIP3-207ENST00000461009 TJP3O95049 919 aa13.35□□□□□ -0.27
RAB11FIP3-207ENST00000461009 FTCDO95954 541 aa13.35□□□□□ -0.27
RAB11FIP3-207ENST00000461009 NFKBIAP25963 317 aa13.35□□□□□ -0.27
RAB11FIP3-207ENST00000461009 PTPN7P35236 360 aa13.35□□□□□ -0.27
RAB11FIP3-207ENST00000461009 HNF1BP35680 557 aa13.35□□□□□ -0.27
RAB11FIP3-207ENST00000461009 MARCKSL1P49006 195 aa13.35□□□□□ -0.27
RAB11FIP3-207ENST00000461009 ITKQ08881 620 aa13.35□□□□□ -0.27
RAB11FIP3-207ENST00000461009 AP1B1Q10567 949 aa13.35□□□□□ -0.27
RAB11FIP3-207ENST00000461009 ZNF284Q2VY69 593 aa13.35□□□□□ -0.27
RAB11FIP3-207ENST00000461009 KLK6Q92876 244 aa13.35□□□□□ -0.27
RAB11FIP3-207ENST00000461009 PDLIM2Q96JY6 352 aa13.35□□□□□ -0.27
RAB11FIP3-207ENST00000461009 LGMNQ99538 433 aa13.35□□□□□ -0.27
RAB11FIP3-207ENST00000461009 MGME1Q9BQP7 344 aa13.35□□□□□ -0.27
RAB11FIP3-207ENST00000461009 HEMGNQ9BXL5 484 aa13.35□□□□□ -0.27
RAB11FIP3-207ENST00000461009 SLC17A9Q9BYT1 436 aa13.35□□□□□ -0.27
RAB11FIP3-207ENST00000461009 OSBPL8Q9BZF1 889 aa13.35□□□□□ -0.27
RAB11FIP3-207ENST00000461009 TOR4AQ9NXH8 423 aa13.35□□□□□ -0.27
RAB11FIP3-207ENST00000461009 HS3ST3A1Q9Y663 406 aa13.35□□□□□ -0.27
RAB11FIP3-207ENST00000461009 CHD8Q9HCK8 2581 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms