RNA–Protein interactions for RNA: ENST00000460739.5

SOX2-OT-201, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 609 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-201ENST00000460739 APOBEC3BQ9UH17 382 aaKnown RBP11.9□□□□□ -0.5
SOX2-OT-201ENST00000460739 ATP8A1Q9Y2Q0 1164 aa11.9□□□□□ -0.5
SOX2-OT-201ENST00000460739 COQ6Q9Y2Z9 468 aa11.9□□□□□ -0.5
SOX2-OT-201ENST00000460739 A0A087X0T9 212 aa11.89□□□□□ -0.51
SOX2-OT-201ENST00000460739 TMEM110-MUSTN1A8MSY1 372 aa11.89□□□□□ -0.51
SOX2-OT-201ENST00000460739 GOLGA6L19H0YKK7 550 aa11.89□□□□□ -0.51
SOX2-OT-201ENST00000460739 TRAFD1O14545 582 aaPredicted RBP11.89□□□□□ -0.51
SOX2-OT-201ENST00000460739 MUSKO15146 869 aa11.89□□□□□ -0.51
SOX2-OT-201ENST00000460739 GCATO75600 419 aa11.89□□□□□ -0.51
SOX2-OT-201ENST00000460739 CYP1A2P05177 515 aa11.89□□□□□ -0.51
SOX2-OT-201ENST00000460739 FAM228BP0C875 321 aa11.89□□□□□ -0.51
SOX2-OT-201ENST00000460739 RARAP10276 462 aa11.89□□□□□ -0.51
SOX2-OT-201ENST00000460739 MYF5P13349 255 aa11.89□□□□□ -0.51
SOX2-OT-201ENST00000460739 LIG3P49916 1009 aa11.89□□□□□ -0.51
SOX2-OT-201ENST00000460739 RENBPP51606 427 aa11.89□□□□□ -0.51
SOX2-OT-201ENST00000460739 AP1S1P61966 158 aa11.89□□□□□ -0.51
SOX2-OT-201ENST00000460739 POLR2LP62875 67 aaKnown RBP11.89□□□□□ -0.51
SOX2-OT-201ENST00000460739 BCL2L1Q07817 233 aa11.89□□□□□ -0.51
SOX2-OT-201ENST00000460739 SLC10A7Q0GE19 358 aa11.89□□□□□ -0.51
SOX2-OT-201ENST00000460739 LBRQ14739 615 aaKnown RBP11.89□□□□□ -0.51
SOX2-OT-201ENST00000460739 SMTNL2Q2TAL5 461 aa11.89□□□□□ -0.51
SOX2-OT-201ENST00000460739 COL28A1Q2UY09 1125 aa11.89□□□□□ -0.51
SOX2-OT-201ENST00000460739 DEFB133Q30KQ1 61 aa11.89□□□□□ -0.51
SOX2-OT-201ENST00000460739 PRRT3Q5FWE3 981 aa11.89□□□□□ -0.51
SOX2-OT-201ENST00000460739 TMCO4Q5TGY1 634 aa11.89□□□□□ -0.51
SOX2-OT-201ENST00000460739 RBFAQ8N0V3 343 aa11.89□□□□□ -0.51
SOX2-OT-201ENST00000460739 IFI44Q8TCB0 444 aa11.89□□□□□ -0.51
SOX2-OT-201ENST00000460739 CPLX3Q8WVH0 158 aa11.89□□□□□ -0.51
SOX2-OT-201ENST00000460739 HNRNPLLQ8WVV9 542 aaKnown RBP11.89□□□□□ -0.51
SOX2-OT-201ENST00000460739 TEKT4Q8WW24 435 aa11.89□□□□□ -0.51
SOX2-OT-201ENST00000460739 SPOCK2Q92563 424 aa11.89□□□□□ -0.51
SOX2-OT-201ENST00000460739 HSPH1Q92598 858 aa11.89□□□□□ -0.51
SOX2-OT-201ENST00000460739 CSPG4P5Q96PW8 444 aa11.89□□□□□ -0.51
SOX2-OT-201ENST00000460739 IL12RB2Q99665 862 aa11.89□□□□□ -0.51
SOX2-OT-201ENST00000460739 LRRC61Q9BV99 259 aa11.89□□□□□ -0.51
SOX2-OT-201ENST00000460739 BOCQ9BWV1 1114 aa11.89□□□□□ -0.51
SOX2-OT-201ENST00000460739 SLC13A1Q9BZW2 595 aa11.89□□□□□ -0.51
SOX2-OT-201ENST00000460739 TCEAL2Q9H3H9 227 aaPredicted RBP11.89□□□□□ -0.51
SOX2-OT-201ENST00000460739 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.89□□□□□ -0.51
SOX2-OT-201ENST00000460739 ETNK2Q9NVF9 386 aa11.89□□□□□ -0.51
SOX2-OT-201ENST00000460739 SEPT3Q9UH03 358 aa11.89□□□□□ -0.51
SOX2-OT-201ENST00000460739 IP6K2Q9UHH9 426 aa11.89□□□□□ -0.51
SOX2-OT-201ENST00000460739 LUC7L2Q9Y383 392 aaKnown RBP11.89□□□□□ -0.51
SOX2-OT-201ENST00000460739 AK5Q9Y6K8 562 aa11.89□□□□□ -0.51
SOX2-OT-201ENST00000460739 URB1O60287 2271 aaKnown RBP11.88□□□□□ -0.51
SOX2-OT-201ENST00000460739 EME2A4GXA9 379 aaPredicted RBP11.88□□□□□ -0.51
SOX2-OT-201ENST00000460739 LMO7DNF2Z398 122 aa11.88□□□□□ -0.51
SOX2-OT-201ENST00000460739 LZTS3O60299 673 aaPredicted RBP11.88□□□□□ -0.51
SOX2-OT-201ENST00000460739 MAFKO60675 156 aa11.88□□□□□ -0.51
SOX2-OT-201ENST00000460739 PEX11BO96011 259 aa11.88□□□□□ -0.51
SOX2-OT-201ENST00000460739 GYPCP04921 128 aa11.88□□□□□ -0.51
SOX2-OT-201ENST00000460739 PRKCGP05129 697 aa11.88□□□□□ -0.51
SOX2-OT-201ENST00000460739 AMPD1P23109 780 aa11.88□□□□□ -0.51
SOX2-OT-201ENST00000460739 HSPA9P38646 679 aaKnown RBP11.88□□□□□ -0.51
SOX2-OT-201ENST00000460739 SCNN1BP51168 640 aa11.88□□□□□ -0.51
SOX2-OT-201ENST00000460739 BLKP51451 505 aa11.88□□□□□ -0.51
SOX2-OT-201ENST00000460739 ADKP55263 362 aaKnown RBP11.88□□□□□ -0.51
SOX2-OT-201ENST00000460739 SEMG2Q02383 582 aa11.88□□□□□ -0.51
SOX2-OT-201ENST00000460739 SLC25A11Q02978 314 aaKnown RBP11.88□□□□□ -0.51
SOX2-OT-201ENST00000460739 PPARDQ03181 441 aa11.88□□□□□ -0.51
SOX2-OT-201ENST00000460739 RALGDSQ12967 914 aa11.88□□□□□ -0.51
SOX2-OT-201ENST00000460739 INPP5AQ14642 412 aa11.88□□□□□ -0.51
SOX2-OT-201ENST00000460739 CDKN3Q16667 212 aa11.88□□□□□ -0.51
SOX2-OT-201ENST00000460739 FAXCQ5TGI0 409 aa11.88□□□□□ -0.51
SOX2-OT-201ENST00000460739 TXNRD3NBQ6F5E7 133 aa11.88□□□□□ -0.51
SOX2-OT-201ENST00000460739 TMCO3Q6UWJ1 677 aa11.88□□□□□ -0.51
SOX2-OT-201ENST00000460739 DPPA4Q7L190 304 aa11.88□□□□□ -0.51
SOX2-OT-201ENST00000460739 FAM71BQ8TC56 605 aa11.88□□□□□ -0.51
SOX2-OT-201ENST00000460739 NSMCE3Q96MG7 304 aa11.88□□□□□ -0.51
SOX2-OT-201ENST00000460739 DEPDC7Q96QD5 511 aa11.88□□□□□ -0.51
SOX2-OT-201ENST00000460739 APOOQ9BUR5 198 aa11.88□□□□□ -0.51
SOX2-OT-201ENST00000460739 NUP85Q9BW27 656 aa11.88□□□□□ -0.51
SOX2-OT-201ENST00000460739 CLPBQ9H078 707 aa11.88□□□□□ -0.51
SOX2-OT-201ENST00000460739 PCDH18Q9HCL0 1135 aa11.88□□□□□ -0.51
SOX2-OT-201ENST00000460739 IFNKQ9P0W0 207 aa11.88□□□□□ -0.51
SOX2-OT-201ENST00000460739 ANAPC7Q9UJX3 599 aa11.88□□□□□ -0.51
SOX2-OT-201ENST00000460739 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.87□□□□□ -0.51
SOX2-OT-201ENST00000460739 A0A1W2PQ67 120 aa11.87□□□□□ -0.51
SOX2-OT-201ENST00000460739 YY2O15391 372 aa11.87□□□□□ -0.51
SOX2-OT-201ENST00000460739 TLX3O43711 291 aaPredicted RBP11.87□□□□□ -0.51
SOX2-OT-201ENST00000460739 BRINP1O60477 761 aa11.87□□□□□ -0.51
SOX2-OT-201ENST00000460739 SOCS5O75159 536 aa11.87□□□□□ -0.51
SOX2-OT-201ENST00000460739 TSHRP16473 764 aa11.87□□□□□ -0.51
SOX2-OT-201ENST00000460739 CR2P20023 1033 aa11.87□□□□□ -0.51
SOX2-OT-201ENST00000460739 PTMSP20962 102 aa11.87□□□□□ -0.51
SOX2-OT-201ENST00000460739 HTR1BP28222 390 aa11.87□□□□□ -0.51
SOX2-OT-201ENST00000460739 SERPINB6P35237 376 aa11.87□□□□□ -0.51
SOX2-OT-201ENST00000460739 EIF2S3P41091 472 aaKnown RBP11.87□□□□□ -0.51
SOX2-OT-201ENST00000460739 RPIAP49247 311 aa11.87□□□□□ -0.51
SOX2-OT-201ENST00000460739 HK3P52790 923 aa11.87□□□□□ -0.51
SOX2-OT-201ENST00000460739 MTM1Q13496 603 aa11.87□□□□□ -0.51
SOX2-OT-201ENST00000460739 C1orf61Q13536 156 aa11.87□□□□□ -0.51
SOX2-OT-201ENST00000460739 ZNF235Q14590 738 aa11.87□□□□□ -0.51
SOX2-OT-201ENST00000460739 NFATC4Q14934 902 aa11.87□□□□□ -0.51
SOX2-OT-201ENST00000460739 NFKBIBQ15653 356 aa11.87□□□□□ -0.51
SOX2-OT-201ENST00000460739 ALG11Q2TAA5 492 aa11.87□□□□□ -0.51
SOX2-OT-201ENST00000460739 C6orf132Q5T0Z8 1188 aa11.87□□□□□ -0.51
SOX2-OT-201ENST00000460739 GUSBP11Q6P575 273 aa11.87□□□□□ -0.51
SOX2-OT-201ENST00000460739 ALKBH5Q6P6C2 394 aaKnown RBP11.87□□□□□ -0.51
SOX2-OT-201ENST00000460739 LIPIQ6XZB0 460 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms