RNA–Protein interactions for RNA: ENST00000460514.1

ABCA4-202, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 5

Gene ABCA4, Length 690 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-202ENST00000460514 CEP128Q6ZU80 1094 aa7.65□□□□□ -1.18
ABCA4-202ENST00000460514 USP45Q70EL2 814 aa7.65□□□□□ -1.18
ABCA4-202ENST00000460514 PRPF39Q86UA1 669 aaKnown RBP7.65□□□□□ -1.18
ABCA4-202ENST00000460514 KBTBD6Q86V97 674 aa7.65□□□□□ -1.18
ABCA4-202ENST00000460514 TMPRSS6Q8IU80 811 aa7.65□□□□□ -1.18
ABCA4-202ENST00000460514 CAMK1DQ8IU85 385 aa7.65□□□□□ -1.18
ABCA4-202ENST00000460514 MMAAQ8IVH4 418 aaKnown RBP7.65□□□□□ -1.18
ABCA4-202ENST00000460514 KLHDC8BQ8IXV7 354 aa7.65□□□□□ -1.18
ABCA4-202ENST00000460514 IFT20Q8IY31 132 aa7.65□□□□□ -1.18
ABCA4-202ENST00000460514 PGBD3Q8N328 593 aa7.65□□□□□ -1.18
ABCA4-202ENST00000460514 FBXL6Q8N531 539 aa7.65□□□□□ -1.18
ABCA4-202ENST00000460514 NOA1Q8NC60 698 aaKnown RBP7.65□□□□□ -1.18
ABCA4-202ENST00000460514 IPMKQ8NFU5 416 aa7.65□□□□□ -1.18
ABCA4-202ENST00000460514 SPATA22Q8NHS9 363 aa7.65□□□□□ -1.18
ABCA4-202ENST00000460514 GANCQ8TET4 914 aa7.65□□□□□ -1.18
ABCA4-202ENST00000460514 UBXN4Q92575 508 aa7.65□□□□□ -1.18
ABCA4-202ENST00000460514 RUBCNQ92622 972 aa7.65□□□□□ -1.18
ABCA4-202ENST00000460514 RAB7BQ96AH8 199 aa7.65□□□□□ -1.18
ABCA4-202ENST00000460514 TADA1Q96BN2 335 aa7.65□□□□□ -1.18
ABCA4-202ENST00000460514 ATG2BQ96BY7 2078 aa7.65□□□□□ -1.18
ABCA4-202ENST00000460514 RMDN1Q96DB5 314 aa7.65□□□□□ -1.18
ABCA4-202ENST00000460514 OXNAD1Q96HP4 312 aaPredicted RBP7.65□□□□□ -1.18
ABCA4-202ENST00000460514 KLHL32Q96NJ5 620 aa7.65□□□□□ -1.18
ABCA4-202ENST00000460514 PSMG3-AS1Q96PY0 264 aa7.65□□□□□ -1.18
ABCA4-202ENST00000460514 FAM129BQ96TA1 746 aa7.65□□□□□ -1.18
ABCA4-202ENST00000460514 OMDQ99983 421 aa7.65□□□□□ -1.18
ABCA4-202ENST00000460514 TBL1YQ9BQ87 522 aa7.65□□□□□ -1.18
ABCA4-202ENST00000460514 TRIM51Q9BSJ1 452 aa7.65□□□□□ -1.18
ABCA4-202ENST00000460514 LRRC1Q9BTT6 524 aa7.65□□□□□ -1.18
ABCA4-202ENST00000460514 TDRD1Q9BXT4 1180 aaKnown RBP7.65□□□□□ -1.18
ABCA4-202ENST00000460514 HDAC8Q9BY41 377 aa7.65□□□□□ -1.18
ABCA4-202ENST00000460514 MTG2Q9H4K7 406 aa7.65□□□□□ -1.18
ABCA4-202ENST00000460514 XAB2Q9HCS7 855 aaKnown RBP7.65□□□□□ -1.18
ABCA4-202ENST00000460514 FAM114A2Q9NRY5 505 aa7.65□□□□□ -1.18
ABCA4-202ENST00000460514 SPATA6Q9NWH7 488 aaPredicted RBP7.65□□□□□ -1.18
ABCA4-202ENST00000460514 WHRNQ9P202 907 aa7.65□□□□□ -1.18
ABCA4-202ENST00000460514 PPM1HQ9ULR3 514 aa7.65□□□□□ -1.18
ABCA4-202ENST00000460514 PHTF1Q9UMS5 762 aa7.65□□□□□ -1.18
ABCA4-202ENST00000460514 SHOC2Q9UQ13 582 aa7.65□□□□□ -1.18
ABCA4-202ENST00000460514 PCDHB9Q9Y5E1 797 aa7.65□□□□□ -1.18
ABCA4-202ENST00000460514 PCDHGC4Q9Y5F7 938 aa7.65□□□□□ -1.18
ABCA4-202ENST00000460514 WASF2Q9Y6W5 498 aa7.65□□□□□ -1.18
ABCA4-202ENST00000460514 COL6A3P12111 3177 aa7.65□□□□□ -1.19
ABCA4-202ENST00000460514 LOC285095A0A1B0GVY8 99 aa7.64□□□□□ -1.19
ABCA4-202ENST00000460514 TSPAN11A1L157 253 aa7.64□□□□□ -1.19
ABCA4-202ENST00000460514 C16orf96A6NNT2 1141 aa7.64□□□□□ -1.19
ABCA4-202ENST00000460514 UPK3BL1B0FP48 263 aa7.64□□□□□ -1.19
ABCA4-202ENST00000460514 UPK3BL2E5RIL1 263 aa7.64□□□□□ -1.19
ABCA4-202ENST00000460514 F5H423 210 aaPredicted RBP7.64□□□□□ -1.19
ABCA4-202ENST00000460514 TRAFD1O14545 582 aaPredicted RBP7.64□□□□□ -1.19
ABCA4-202ENST00000460514 SLC7A4O43246 635 aa7.64□□□□□ -1.19
ABCA4-202ENST00000460514 LAMTOR5O43504 91 aa7.64□□□□□ -1.19
ABCA4-202ENST00000460514 ZNF217O75362 1048 aa7.64□□□□□ -1.19
ABCA4-202ENST00000460514 SUN1O94901 812 aa7.64□□□□□ -1.19
ABCA4-202ENST00000460514 SEC31AO94979 1220 aaKnown RBP7.64□□□□□ -1.19
ABCA4-202ENST00000460514 PGLSO95336 258 aa7.64□□□□□ -1.19
ABCA4-202ENST00000460514 PIGNO95427 931 aa7.64□□□□□ -1.19
ABCA4-202ENST00000460514 PDGFBP01127 241 aaPredicted RBP7.64□□□□□ -1.19
ABCA4-202ENST00000460514 TUBBP07437 444 aa7.64□□□□□ -1.19
ABCA4-202ENST00000460514 CTSLP07711 333 aa7.64□□□□□ -1.19
ABCA4-202ENST00000460514 MMP2P08253 660 aa7.64□□□□□ -1.19
ABCA4-202ENST00000460514 CYP2A6P11509 494 aaPredicted RBP7.64□□□□□ -1.19
ABCA4-202ENST00000460514 MLNP12872 115 aa7.64□□□□□ -1.19
ABCA4-202ENST00000460514 MCM3P25205 808 aa7.64□□□□□ -1.19
ABCA4-202ENST00000460514 OXTRP30559 389 aa7.64□□□□□ -1.19
ABCA4-202ENST00000460514 GKP32189 559 aa7.64□□□□□ -1.19
ABCA4-202ENST00000460514 NEK3P51956 506 aa7.64□□□□□ -1.19
ABCA4-202ENST00000460514 COPAP53621 1224 aa7.64□□□□□ -1.19
ABCA4-202ENST00000460514 RPS14P62263 151 aaKnown RBP7.64□□□□□ -1.19
ABCA4-202ENST00000460514 ELP6Q0PNE2 266 aa7.64□□□□□ -1.19
ABCA4-202ENST00000460514 CDH17Q12864 832 aa7.64□□□□□ -1.19
ABCA4-202ENST00000460514 TRAF2Q12933 501 aa7.64□□□□□ -1.19
ABCA4-202ENST00000460514 MTAPQ13126 283 aa7.64□□□□□ -1.19
ABCA4-202ENST00000460514 CUL1Q13616 776 aa7.64□□□□□ -1.19
ABCA4-202ENST00000460514 FAXCQ5TGI0 409 aa7.64□□□□□ -1.19
ABCA4-202ENST00000460514 ARMC3Q5W041 872 aa7.64□□□□□ -1.19
ABCA4-202ENST00000460514 DUPD1Q68J44 220 aa7.64□□□□□ -1.19
ABCA4-202ENST00000460514 KCTD11Q693B1 232 aa7.64□□□□□ -1.19
ABCA4-202ENST00000460514 KIAA1211LQ6NV74 962 aa7.64□□□□□ -1.19
ABCA4-202ENST00000460514 PKN3Q6P5Z2 889 aa7.64□□□□□ -1.19
ABCA4-202ENST00000460514 KDELC1Q6UW63 502 aa7.64□□□□□ -1.19
ABCA4-202ENST00000460514 USP30Q70CQ3 517 aa7.64□□□□□ -1.19
ABCA4-202ENST00000460514 ERN2Q76MJ5 926 aaKnown RBP7.64□□□□□ -1.19
ABCA4-202ENST00000460514 PRUNE1Q86TP1 453 aa7.64□□□□□ -1.19
ABCA4-202ENST00000460514 KRTAP1-3Q8IUG1 177 aa7.64□□□□□ -1.19
ABCA4-202ENST00000460514 TAB3Q8N5C8 712 aaPredicted RBP7.64□□□□□ -1.19
ABCA4-202ENST00000460514 DNAAF3Q8N9W5 541 aa7.64□□□□□ -1.19
ABCA4-202ENST00000460514 GLIS1Q8NBF1 620 aa7.64□□□□□ -1.19
ABCA4-202ENST00000460514 MCUQ8NE86 351 aa7.64□□□□□ -1.19
ABCA4-202ENST00000460514 LPCAT1Q8NF37 534 aa7.64□□□□□ -1.19
ABCA4-202ENST00000460514 HMGB4Q8WW32 186 aa7.64□□□□□ -1.19
ABCA4-202ENST00000460514 ECHDC3Q96DC8 303 aa7.64□□□□□ -1.19
ABCA4-202ENST00000460514 MRGPRX2Q96LB1 330 aa7.64□□□□□ -1.19
ABCA4-202ENST00000460514 MRGPRX1Q96LB2 322 aa7.64□□□□□ -1.19
ABCA4-202ENST00000460514 MLPHQ9BV36 600 aaPredicted RBP7.64□□□□□ -1.19
ABCA4-202ENST00000460514 FICDQ9BVA6 458 aa7.64□□□□□ -1.19
ABCA4-202ENST00000460514 FOXP3Q9BZS1 431 aa7.64□□□□□ -1.19
ABCA4-202ENST00000460514 TRIM31Q9BZY9 425 aa7.64□□□□□ -1.19
ABCA4-202ENST00000460514 TSPYL1Q9H0U9 437 aa7.64□□□□□ -1.19
ABCA4-202ENST00000460514 PABPC3Q9H361 631 aaKnown RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms