RNA–Protein interactions for RNA: ENST00000456433.5

PMPCB-206, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 5

Gene PMPCB, Length 904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-206ENST00000456433 SPATA22Q8NHS9 363 aa17.2■□□□□ 0.34
PMPCB-206ENST00000456433 DNASE2BQ8WZ79 361 aa17.2■□□□□ 0.34
PMPCB-206ENST00000456433 OXNAD1Q96HP4 312 aaPredicted RBP17.2■□□□□ 0.34
PMPCB-206ENST00000456433 MCCC1Q96RQ3 725 aaPredicted RBP17.2■□□□□ 0.34
PMPCB-206ENST00000456433 GORASP1Q9BQQ3 440 aa17.2■□□□□ 0.34
PMPCB-206ENST00000456433 PCDH9Q9HC56 1237 aa17.2■□□□□ 0.34
PMPCB-206ENST00000456433 PCDH12Q9NPG4 1184 aa17.2■□□□□ 0.34
PMPCB-206ENST00000456433 SMARCAL1Q9NZC9 954 aa17.2■□□□□ 0.34
PMPCB-206ENST00000456433 RAB23Q9ULC3 237 aa17.2■□□□□ 0.34
PMPCB-206ENST00000456433 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.2■□□□□ 0.34
PMPCB-206ENST00000456433 GVINP1Q7Z2Y8 2422 aa17.2■□□□□ 0.34
PMPCB-206ENST00000456433 KNL1Q8NG31 2342 aa17.2■□□□□ 0.34
PMPCB-206ENST00000456433 LRRK1Q38SD2 2015 aa17.2■□□□□ 0.34
PMPCB-206ENST00000456433 ZNF292O60281 2723 aa17.2■□□□□ 0.34
PMPCB-206ENST00000456433 PHF2O75151 1096 aa17.19■□□□□ 0.34
PMPCB-206ENST00000456433 MT-CYBP00156 380 aaPredicted RBP17.19■□□□□ 0.34
PMPCB-206ENST00000456433 IGHV4-34P06331 123 aa17.19■□□□□ 0.34
PMPCB-206ENST00000456433 PDHA1P08559 390 aa17.19■□□□□ 0.34
PMPCB-206ENST00000456433 PSMB4P28070 264 aa17.19■□□□□ 0.34
PMPCB-206ENST00000456433 FNTAP49354 379 aa17.19■□□□□ 0.34
PMPCB-206ENST00000456433 GEMP55040 296 aa17.19■□□□□ 0.34
PMPCB-206ENST00000456433 LMNB2Q03252 620 aa17.19■□□□□ 0.34
PMPCB-206ENST00000456433 CDK18Q07002 472 aa17.19■□□□□ 0.34
PMPCB-206ENST00000456433 PARP6Q2NL67 630 aa17.19■□□□□ 0.34
PMPCB-206ENST00000456433 TMEM259Q4ZIN3 620 aa17.19■□□□□ 0.34
PMPCB-206ENST00000456433 PEAR1Q5VY43 1037 aaPredicted RBP17.19■□□□□ 0.34
PMPCB-206ENST00000456433 LYSMD4Q5XG99 296 aa17.19■□□□□ 0.34
PMPCB-206ENST00000456433 ERAP2Q6P179 960 aa17.19■□□□□ 0.34
PMPCB-206ENST00000456433 ARHGEF18Q6ZSZ5 1173 aa17.19■□□□□ 0.34
PMPCB-206ENST00000456433 DPPA4Q7L190 304 aa17.19■□□□□ 0.34
PMPCB-206ENST00000456433 HORMAD1Q86X24 394 aa17.19■□□□□ 0.34
PMPCB-206ENST00000456433 NDUFAF2Q8N183 169 aa17.19■□□□□ 0.34
PMPCB-206ENST00000456433 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.19■□□□□ 0.34
PMPCB-206ENST00000456433 ATL2Q8NHH9 583 aa17.19■□□□□ 0.34
PMPCB-206ENST00000456433 PDCD6IPQ8WUM4 868 aaKnown RBP17.19■□□□□ 0.34
PMPCB-206ENST00000456433 MAGOHBQ96A72 148 aaKnown RBP17.19■□□□□ 0.34
PMPCB-206ENST00000456433 FAM122AQ96E09 287 aa17.19■□□□□ 0.34
PMPCB-206ENST00000456433 SCRN2Q96FV2 425 aa17.19■□□□□ 0.34
PMPCB-206ENST00000456433 FEM1CQ96JP0 617 aa17.19■□□□□ 0.34
PMPCB-206ENST00000456433 HSPA12BQ96MM6 686 aa17.19■□□□□ 0.34
PMPCB-206ENST00000456433 LYSMD1Q96S90 227 aa17.19■□□□□ 0.34
PMPCB-206ENST00000456433 AP1M1Q9BXS5 423 aa17.19■□□□□ 0.34
PMPCB-206ENST00000456433 CHKBQ9Y259 395 aa17.19■□□□□ 0.34
PMPCB-206ENST00000456433 PCDHGA5Q9Y5G8 931 aa17.19■□□□□ 0.34
PMPCB-206ENST00000456433 TBC1D3DA0A087WVF3 549 aa17.18■□□□□ 0.34
PMPCB-206ENST00000456433 TBC1D3IA0A087WXS9 549 aa17.18■□□□□ 0.34
PMPCB-206ENST00000456433 TBC1D3EA0A087X179 549 aa17.18■□□□□ 0.34
PMPCB-206ENST00000456433 TBC1D3KA0A087X1G2 549 aa17.18■□□□□ 0.34
PMPCB-206ENST00000456433 A0A0J9YYE9 177 aa17.18■□□□□ 0.34
PMPCB-206ENST00000456433 LOC285095A0A1B0GVY8 99 aa17.18■□□□□ 0.34
PMPCB-206ENST00000456433 TBC1D3FA6NER0 549 aaPredicted RBP17.18■□□□□ 0.34
PMPCB-206ENST00000456433 TBC1D3LB9A6J9 549 aa17.18■□□□□ 0.34
PMPCB-206ENST00000456433 EPN2O95208 641 aa17.18■□□□□ 0.34
PMPCB-206ENST00000456433 TRBC1P01850 177 aa17.18■□□□□ 0.34
PMPCB-206ENST00000456433 LMNAP02545 664 aaKnown RBP17.18■□□□□ 0.34
PMPCB-206ENST00000456433 TBC1D3HP0C7X1 549 aa17.18■□□□□ 0.34
PMPCB-206ENST00000456433 HOXD12P35452 270 aa17.18■□□□□ 0.34
PMPCB-206ENST00000456433 COILP38432 576 aaPredicted RBP17.18■□□□□ 0.34
PMPCB-206ENST00000456433 PTGER3P43115 390 aa17.18■□□□□ 0.34
PMPCB-206ENST00000456433 GRIA4P48058 902 aa17.18■□□□□ 0.34
PMPCB-206ENST00000456433 WNT3AP56704 352 aa17.18■□□□□ 0.34
PMPCB-206ENST00000456433 PPP2CBP62714 309 aa17.18■□□□□ 0.34
PMPCB-206ENST00000456433 RPS21P63220 83 aaKnown RBP17.18■□□□□ 0.34
PMPCB-206ENST00000456433 PPP2CAP67775 309 aa17.18■□□□□ 0.34
PMPCB-206ENST00000456433 PRPSAP1Q14558 356 aa17.18■□□□□ 0.34
PMPCB-206ENST00000456433 WDR45BQ5MNZ6 344 aa17.18■□□□□ 0.34
PMPCB-206ENST00000456433 SYCP2LQ5T4T6 812 aa17.18■□□□□ 0.34
PMPCB-206ENST00000456433 TBC1D3GQ6DHY5 549 aa17.18■□□□□ 0.34
PMPCB-206ENST00000456433 TBC1D3CQ6IPX1 549 aa17.18■□□□□ 0.34
PMPCB-206ENST00000456433 C4orf22Q6V702 233 aa17.18■□□□□ 0.34
PMPCB-206ENST00000456433 TBC1D3Q8IZP1 549 aaPredicted RBP17.18■□□□□ 0.34
PMPCB-206ENST00000456433 ASB12Q8WXK4 309 aa17.18■□□□□ 0.34
PMPCB-206ENST00000456433 BIRC7Q96CA5 298 aa17.18■□□□□ 0.34
PMPCB-206ENST00000456433 MRGPRX2Q96LB1 330 aa17.18■□□□□ 0.34
PMPCB-206ENST00000456433 ORAI3Q9BRQ5 295 aa17.18■□□□□ 0.34
PMPCB-206ENST00000456433 ADGRE3Q9BY15 652 aa17.18■□□□□ 0.34
PMPCB-206ENST00000456433 ZFR2Q9UPR6 939 aaKnown RBP17.18■□□□□ 0.34
PMPCB-206ENST00000456433 AAR2Q9Y312 384 aaKnown RBP17.18■□□□□ 0.34
PMPCB-206ENST00000456433 FAM47DPA6NHR8 397 aa17.17■□□□□ 0.34
PMPCB-206ENST00000456433 ANKRD66B4E2M5 251 aa17.17■□□□□ 0.34
PMPCB-206ENST00000456433 RNGTTO60942 597 aaKnown RBP17.17■□□□□ 0.34
PMPCB-206ENST00000456433 PMPCBO75439 489 aa17.17■□□□□ 0.34
PMPCB-206ENST00000456433 PCDH8O95206 1070 aa17.17■□□□□ 0.34
PMPCB-206ENST00000456433 NDST3O95803 873 aa17.17■□□□□ 0.34
PMPCB-206ENST00000456433 CYP2A6P11509 494 aaPredicted RBP17.17■□□□□ 0.34
PMPCB-206ENST00000456433 ACTN2P35609 894 aa17.17■□□□□ 0.34
PMPCB-206ENST00000456433 FDFT1P37268 417 aa17.17■□□□□ 0.34
PMPCB-206ENST00000456433 PAFAH1B1P43034 410 aa17.17■□□□□ 0.34
PMPCB-206ENST00000456433 KCNJ1P48048 391 aa17.17■□□□□ 0.34
PMPCB-206ENST00000456433 DHPSP49366 369 aaPredicted RBP17.17■□□□□ 0.34
PMPCB-206ENST00000456433 RALGDSQ12967 914 aa17.17■□□□□ 0.34
PMPCB-206ENST00000456433 QPCTQ16769 361 aa17.17■□□□□ 0.34
PMPCB-206ENST00000456433 ZNF284Q2VY69 593 aa17.17■□□□□ 0.34
PMPCB-206ENST00000456433 LRRC73Q5JTD7 316 aa17.17■□□□□ 0.34
PMPCB-206ENST00000456433 RALGAPA1Q6GYQ0 2036 aa17.17■□□□□ 0.34
PMPCB-206ENST00000456433 TTC27Q6P3X3 843 aa17.17■□□□□ 0.34
PMPCB-206ENST00000456433 USP45Q70EL2 814 aa17.17■□□□□ 0.34
PMPCB-206ENST00000456433 PAF1Q8N7H5 531 aa17.17■□□□□ 0.34
PMPCB-206ENST00000456433 CCDC89Q8N998 374 aa17.17■□□□□ 0.34
PMPCB-206ENST00000456433 C1orf216Q8TAB5 229 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms