RNA–Protein interactions for RNA: ENST00000455656.1

TMEM56-202, Transcript of transmembrane protein 56, humanhuman

TSL 5

Gene TMEM56, Length 609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-202ENST00000455656 MAGEA1P43355 309 aa11.93□□□□□ -0.5
TMEM56-202ENST00000455656 MMP13P45452 471 aa11.93□□□□□ -0.5
TMEM56-202ENST00000455656 RABIFP47224 123 aa11.93□□□□□ -0.5
TMEM56-202ENST00000455656 RENBPP51606 427 aa11.93□□□□□ -0.5
TMEM56-202ENST00000455656 BCL2L1Q07817 233 aa11.93□□□□□ -0.5
TMEM56-202ENST00000455656 EIF2B5Q13144 721 aaKnown RBP11.93□□□□□ -0.5
TMEM56-202ENST00000455656 ZNF235Q14590 738 aa11.93□□□□□ -0.5
TMEM56-202ENST00000455656 IRF4Q15306 451 aa11.93□□□□□ -0.5
TMEM56-202ENST00000455656 TAZQ16635 292 aa11.93□□□□□ -0.5
TMEM56-202ENST00000455656 WSCD2Q2TBF2 565 aa11.93□□□□□ -0.5
TMEM56-202ENST00000455656 MARC1Q5VT66 337 aa11.93□□□□□ -0.5
TMEM56-202ENST00000455656 LRRC38Q5VT99 294 aa11.93□□□□□ -0.5
TMEM56-202ENST00000455656 SLC9A4Q6AI14 798 aa11.93□□□□□ -0.5
TMEM56-202ENST00000455656 RAD9BQ6WBX8 426 aa11.93□□□□□ -0.5
TMEM56-202ENST00000455656 PTAR1Q7Z6K3 402 aaPredicted RBP11.93□□□□□ -0.5
TMEM56-202ENST00000455656 VSIG1Q86XK7 387 aa11.93□□□□□ -0.5
TMEM56-202ENST00000455656 LRRC49Q8IUZ0 686 aa11.93□□□□□ -0.5
TMEM56-202ENST00000455656 TMEM139Q8IV31 216 aa11.93□□□□□ -0.5
TMEM56-202ENST00000455656 CBARPQ8N350 705 aaPredicted RBP11.93□□□□□ -0.5
TMEM56-202ENST00000455656 EID2Q8N6I1 236 aa11.93□□□□□ -0.5
TMEM56-202ENST00000455656 CXorf40AQ8TE69 158 aa11.93□□□□□ -0.5
TMEM56-202ENST00000455656 GATA6Q92908 595 aa11.93□□□□□ -0.5
TMEM56-202ENST00000455656 HDAC11Q96DB2 347 aa11.93□□□□□ -0.5
TMEM56-202ENST00000455656 TSGA13Q96PP4 275 aa11.93□□□□□ -0.5
TMEM56-202ENST00000455656 PANX2Q96RD6 677 aa11.93□□□□□ -0.5
TMEM56-202ENST00000455656 GOLPH3Q9H4A6 298 aa11.93□□□□□ -0.5
TMEM56-202ENST00000455656 NOD2Q9HC29 1040 aa11.93□□□□□ -0.5
TMEM56-202ENST00000455656 SALL4Q9UJQ4 1053 aa11.93□□□□□ -0.5
TMEM56-202ENST00000455656 REXO2Q9Y3B8 237 aaKnown RBP11.93□□□□□ -0.5
TMEM56-202ENST00000455656 NEUROG3Q9Y4Z2 214 aa11.93□□□□□ -0.5
TMEM56-202ENST00000455656 PCDHGC4Q9Y5F7 938 aa11.93□□□□□ -0.5
TMEM56-202ENST00000455656 CHD8Q9HCK8 2581 aa11.92□□□□□ -0.5
TMEM56-202ENST00000455656 KMT2BQ9UMN6 2715 aaPredicted RBP11.92□□□□□ -0.5
TMEM56-202ENST00000455656 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.92□□□□□ -0.5
TMEM56-202ENST00000455656 CFAP69A5D8W1 941 aa11.92□□□□□ -0.5
TMEM56-202ENST00000455656 SOWAHDA6NJG2 315 aa11.92□□□□□ -0.5
TMEM56-202ENST00000455656 TRIM38O00635 465 aa11.92□□□□□ -0.5
TMEM56-202ENST00000455656 FPGTO14772 594 aa11.92□□□□□ -0.5
TMEM56-202ENST00000455656 MATN3O15232 486 aa11.92□□□□□ -0.5
TMEM56-202ENST00000455656 TRIM16O95361 564 aa11.92□□□□□ -0.5
TMEM56-202ENST00000455656 CSF2P04141 144 aa11.92□□□□□ -0.5
TMEM56-202ENST00000455656 NME1P15531 152 aaKnown RBP11.92□□□□□ -0.5
TMEM56-202ENST00000455656 COMTP21964 271 aa11.92□□□□□ -0.5
TMEM56-202ENST00000455656 CCNCP24863 283 aa11.92□□□□□ -0.5
TMEM56-202ENST00000455656 SLC1A1P43005 524 aa11.92□□□□□ -0.5
TMEM56-202ENST00000455656 LIG3P49916 1009 aa11.92□□□□□ -0.5
TMEM56-202ENST00000455656 SGCGQ13326 291 aa11.92□□□□□ -0.5
TMEM56-202ENST00000455656 PTPRRQ15256 657 aa11.92□□□□□ -0.5
TMEM56-202ENST00000455656 PROX2Q3B8N5 592 aa11.92□□□□□ -0.5
TMEM56-202ENST00000455656 ZNF542PQ5EBM4 170 aa11.92□□□□□ -0.5
TMEM56-202ENST00000455656 LIPIQ6XZB0 460 aa11.92□□□□□ -0.5
TMEM56-202ENST00000455656 NYAP1Q6ZVC0 841 aa11.92□□□□□ -0.5
TMEM56-202ENST00000455656 DPPA4Q7L190 304 aa11.92□□□□□ -0.5
TMEM56-202ENST00000455656 DCP2Q8IU60 420 aaKnown RBP11.92□□□□□ -0.5
TMEM56-202ENST00000455656 MAP7D3Q8IWC1 876 aa11.92□□□□□ -0.5
TMEM56-202ENST00000455656 CCDC170Q8IYT3 715 aa11.92□□□□□ -0.5
TMEM56-202ENST00000455656 FUBP1Q96AE4 644 aaKnown RBP11.92□□□□□ -0.5
TMEM56-202ENST00000455656 NT5MQ9NPB1 228 aa11.92□□□□□ -0.5
TMEM56-202ENST00000455656 APOBEC2Q9Y235 224 aaKnown RBP11.92□□□□□ -0.5
TMEM56-202ENST00000455656 PPIL1Q9Y3C6 166 aa11.92□□□□□ -0.5
TMEM56-202ENST00000455656 MSRB2Q9Y3D2 182 aa11.92□□□□□ -0.5
TMEM56-202ENST00000455656 PCDHA13Q9Y5I0 950 aa11.92□□□□□ -0.5
TMEM56-202ENST00000455656 MAP1BP46821 2468 aaKnown RBP11.91□□□□□ -0.5
TMEM56-202ENST00000455656 A0A0A6YYK5 440 aaPredicted RBP11.91□□□□□ -0.5
TMEM56-202ENST00000455656 LY6G6EA0A0G2JKS1 128 aa11.91□□□□□ -0.5
TMEM56-202ENST00000455656 LRRD1A4D1F6 860 aa11.91□□□□□ -0.5
TMEM56-202ENST00000455656 C1QTNF9BB2RNN3 333 aa11.91□□□□□ -0.5
TMEM56-202ENST00000455656 ENC1O14682 589 aa11.91□□□□□ -0.5
TMEM56-202ENST00000455656 CAPNS1P04632 268 aa11.91□□□□□ -0.5
TMEM56-202ENST00000455656 HLA-DQB2P05538 268 aa11.91□□□□□ -0.5
TMEM56-202ENST00000455656 PDHA1P08559 390 aa11.91□□□□□ -0.5
TMEM56-202ENST00000455656 C1QTNF9P0C862 333 aa11.91□□□□□ -0.5
TMEM56-202ENST00000455656 LHCGRP22888 699 aa11.91□□□□□ -0.5
TMEM56-202ENST00000455656 ACADVLP49748 655 aa11.91□□□□□ -0.5
TMEM56-202ENST00000455656 ADCY2Q08462 1091 aa11.91□□□□□ -0.5
TMEM56-202ENST00000455656 PPIDQ08752 370 aaKnown RBP11.91□□□□□ -0.5
TMEM56-202ENST00000455656 DNAJC3Q13217 504 aa11.91□□□□□ -0.5
TMEM56-202ENST00000455656 PDE1CQ14123 709 aaPredicted RBP11.91□□□□□ -0.5
TMEM56-202ENST00000455656 IFI16Q16666 785 aaKnown RBP11.91□□□□□ -0.5
TMEM56-202ENST00000455656 INAVAQ3KP66 663 aa11.91□□□□□ -0.5
TMEM56-202ENST00000455656 RALGPS1Q5JS13 557 aa11.91□□□□□ -0.5
TMEM56-202ENST00000455656 FAM182AQ5T1J6 154 aa11.91□□□□□ -0.5
TMEM56-202ENST00000455656 KCTD16Q68DU8 428 aa11.91□□□□□ -0.5
TMEM56-202ENST00000455656 MFSD7Q6UXD7 560 aa11.91□□□□□ -0.5
TMEM56-202ENST00000455656 NPNTQ6UXI9 565 aa11.91□□□□□ -0.5
TMEM56-202ENST00000455656 RHOT1Q8IXI2 618 aa11.91□□□□□ -0.5
TMEM56-202ENST00000455656 PELI3Q8N2H9 469 aa11.91□□□□□ -0.5
TMEM56-202ENST00000455656 CNTD1Q8N815 330 aa11.91□□□□□ -0.5
TMEM56-202ENST00000455656 ARRDC2Q8TBH0 407 aa11.91□□□□□ -0.5
TMEM56-202ENST00000455656 PIH1D2Q8WWB5 315 aa11.91□□□□□ -0.5
TMEM56-202ENST00000455656 CNDP2Q96KP4 475 aaKnown RBP11.91□□□□□ -0.5
TMEM56-202ENST00000455656 OLFM3Q96PB7 478 aa11.91□□□□□ -0.5
TMEM56-202ENST00000455656 SMIM14Q96QK8 99 aa11.91□□□□□ -0.5
TMEM56-202ENST00000455656 IL12RB2Q99665 862 aa11.91□□□□□ -0.5
TMEM56-202ENST00000455656 TCEAL2Q9H3H9 227 aaPredicted RBP11.91□□□□□ -0.5
TMEM56-202ENST00000455656 SCUBE2Q9NQ36 999 aa11.91□□□□□ -0.5
TMEM56-202ENST00000455656 B4GALT6Q9UBX8 382 aa11.91□□□□□ -0.5
TMEM56-202ENST00000455656 FTSJ1Q9UET6 329 aa11.91□□□□□ -0.5
TMEM56-202ENST00000455656 ALG6Q9Y672 507 aa11.91□□□□□ -0.5
TMEM56-202ENST00000455656 U3KQA8 63 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms