RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 LMO2P25791 158 aa5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 IL1R2P27930 398 aa5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 SLC6A11P48066 632 aa5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 KCNC1P48547 511 aa5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 PIK3CGP48736 1102 aa5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 GATMP50440 423 aa5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 PNLIPRP1P54315 467 aa5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 BCAT1P54687 386 aa5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 ALDH18A1P54886 795 aaKnown RBP5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 CORO7P57737 925 aa5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 GNG11P61952 73 aa5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 NOMO3P69849 1222 aa5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 GPC5P78333 572 aa5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 IFI35P80217 286 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 RNASELQ05823 741 aaKnown RBP5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 EGR3Q06889 387 aa5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 DBPQ10586 325 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 SCAPQ12770 1279 aa5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 SCARB2Q14108 478 aa5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 ADGRE1Q14246 886 aa5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 GPR68Q15743 365 aa5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 CTXN3Q4LDR2 81 aa5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 TIGD5Q53EQ6 642 aa5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 ZNF569Q5MCW4 686 aa5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 SNX30Q5VWJ9 437 aa5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 WSCD1Q658N2 575 aa5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 DENND1BQ6P3S1 775 aa5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 ZNF449Q6P9G9 518 aa5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 LCLAT1Q6UWP7 414 aa5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 SYT10Q6XYQ8 523 aa5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 ACOT1Q86TX2 421 aa5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 DCP2Q8IU60 420 aaKnown RBP5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 ADGRF2Q8IZF7 708 aa5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 ABI1Q8IZP0 508 aa5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 TMEM86AQ8N2M4 240 aa5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 PDCL2Q8N4E4 241 aa5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 TMEM199Q8N511 208 aa5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 WDTC1Q8N5D0 677 aa5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 C12orf29Q8N999 325 aa5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 TOR1AIP2Q8NFQ8 470 aa5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 SCAMP5Q8TAC9 235 aa5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 IFI44Q8TCB0 444 aa5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 MGARPQ8TDB4 240 aa5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 CREB3L4Q8TEY5 395 aa5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 CPA5Q8WXQ8 436 aa5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 CTNNBL1Q8WYA6 563 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 SEC14L1Q92503 715 aa5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 SH3KBP1Q96B97 665 aa5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 CYFIP2Q96F07 1278 aa5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 HIC2Q96JB3 615 aa5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 FEM1CQ96JP0 617 aa5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 MEGF10Q96KG7 1140 aa5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 HSPA12BQ96MM6 686 aa5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 WDR24Q96S15 920 aa5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 JMJD8Q96S16 334 aa5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 C1orf43Q9BWL3 253 aa5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 TSGA10Q9BZW7 698 aa5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 LHX5Q9H2C1 402 aa5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 SNX25Q9H3E2 840 aa5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 NRDE2Q9H7Z3 1164 aa5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 SLAMF7Q9NQ25 335 aa5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 STOML1Q9UBI4 398 aa5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 MTRRQ9UBK8 725 aa5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 TNFRSF10DQ9UBN6 386 aa5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 TMCC3Q9ULS5 477 aa5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 WASF3Q9UPY6 502 aa5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 LTBP2Q14767 1821 aa5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 VWA8A3KMH1 1905 aa5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 MACROD2A1Z1Q3 448 aa5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 MBD3L4A6NDZ8 208 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 MBD3L3A6NE82 208 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 TBKBP1A7MCY6 615 aa5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 A8MXQ7 604 aa5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 F8W810 466 aa5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 TMEM189-UBE2V1I3L0A0 370 aa5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 I3L4J1 428 aa5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 O00370 1275 aa5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 NRP1O14786 923 aa5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 MED7O43513 233 aa5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 HCRTO43612 131 aa5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 PRAMEF4O60810 478 aa5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 ATP2C2O75185 946 aa5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 TADA2AO75478 443 aa5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 MOCS3O95396 460 aa5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 ABHD16AO95870 558 aa5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 CYP1A2P05177 515 aa5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 ITGB1P05556 798 aa5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 CEACAM5P06731 702 aa5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 CSF1P09603 554 aa5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 FAHP16930 419 aa5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 MMP8P22894 467 aa5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 ABCD3P28288 659 aa5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 CASQ1P31415 396 aa5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 CDH5P33151 784 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 GPD2P43304 727 aa5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 NSFP46459 744 aaKnown RBP5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 BRCC3P46736 316 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms