RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 FTCDO95954 541 aa14.27□□□□□ -0.13
HDAC4-205ENST00000454542 CPP00450 1065 aa14.27□□□□□ -0.13
HDAC4-205ENST00000454542 MMP2P08253 660 aa14.27□□□□□ -0.13
HDAC4-205ENST00000454542 ITIH2P19823 946 aa14.27□□□□□ -0.13
HDAC4-205ENST00000454542 CES1P23141 567 aa14.27□□□□□ -0.13
HDAC4-205ENST00000454542 AKT2P31751 481 aa14.27□□□□□ -0.13
HDAC4-205ENST00000454542 NXPH1P58417 271 aa14.27□□□□□ -0.13
HDAC4-205ENST00000454542 DSC2Q02487 901 aa14.27□□□□□ -0.13
HDAC4-205ENST00000454542 NIPAL4Q0D2K0 466 aa14.27□□□□□ -0.13
HDAC4-205ENST00000454542 NOMO1Q15155 1222 aa14.27□□□□□ -0.13
HDAC4-205ENST00000454542 SLC14A2Q15849 920 aa14.27□□□□□ -0.13
HDAC4-205ENST00000454542 KAZNQ674X7 775 aa14.27□□□□□ -0.13
HDAC4-205ENST00000454542 DPPA4Q7L190 304 aa14.27□□□□□ -0.13
HDAC4-205ENST00000454542 BZW1Q7L1Q6 419 aaKnown RBP14.27□□□□□ -0.13
HDAC4-205ENST00000454542 TTC7BQ86TV6 843 aa14.27□□□□□ -0.13
HDAC4-205ENST00000454542 CCDC50Q8IVM0 306 aa14.27□□□□□ -0.13
HDAC4-205ENST00000454542 CCNYQ8ND76 341 aa14.27□□□□□ -0.13
HDAC4-205ENST00000454542 OR2I1PQ8NGU4 316 aa14.27□□□□□ -0.13
HDAC4-205ENST00000454542 FAM174AQ8TBP5 190 aa14.27□□□□□ -0.13
HDAC4-205ENST00000454542 TADA1Q96BN2 335 aa14.27□□□□□ -0.13
HDAC4-205ENST00000454542 MCCC1Q96RQ3 725 aaPredicted RBP14.27□□□□□ -0.13
HDAC4-205ENST00000454542 GTPBP2Q9BX10 602 aaKnown RBP14.27□□□□□ -0.13
HDAC4-205ENST00000454542 TDRD1Q9BXT4 1180 aaKnown RBP14.27□□□□□ -0.13
HDAC4-205ENST00000454542 SLC17A9Q9BYT1 436 aa14.27□□□□□ -0.13
HDAC4-205ENST00000454542 OSBPL8Q9BZF1 889 aa14.27□□□□□ -0.13
HDAC4-205ENST00000454542 FZD3Q9NPG1 666 aa14.27□□□□□ -0.13
HDAC4-205ENST00000454542 HAUS2Q9NVX0 235 aa14.27□□□□□ -0.13
HDAC4-205ENST00000454542 SAE1Q9UBE0 346 aaPredicted RBP14.27□□□□□ -0.13
HDAC4-205ENST00000454542 PACSIN2Q9UNF0 486 aaPredicted RBP14.27□□□□□ -0.13
HDAC4-205ENST00000454542 FNDC3AQ9Y2H6 1198 aaKnown RBP14.27□□□□□ -0.13
HDAC4-205ENST00000454542 PPIL1Q9Y3C6 166 aa14.27□□□□□ -0.13
HDAC4-205ENST00000454542 IGLON5A6NGN9 336 aa14.26□□□□□ -0.13
HDAC4-205ENST00000454542 HACD1B0YJ81 288 aa14.26□□□□□ -0.13
HDAC4-205ENST00000454542 SLC31A1O15431 190 aa14.26□□□□□ -0.13
HDAC4-205ENST00000454542 OPHN1O60890 802 aa14.26□□□□□ -0.13
HDAC4-205ENST00000454542 PYGMP11217 842 aa14.26□□□□□ -0.13
HDAC4-205ENST00000454542 C6P13671 934 aa14.26□□□□□ -0.13
HDAC4-205ENST00000454542 GM2AP17900 193 aa14.26□□□□□ -0.13
HDAC4-205ENST00000454542 ATXN3P54252 364 aaPredicted RBP14.26□□□□□ -0.13
HDAC4-205ENST00000454542 SLC14A1Q13336 389 aa14.26□□□□□ -0.13
HDAC4-205ENST00000454542 KLF1Q13351 362 aaPredicted RBP14.26□□□□□ -0.13
HDAC4-205ENST00000454542 LLGL1Q15334 1064 aa14.26□□□□□ -0.13
HDAC4-205ENST00000454542 HLA-BQ31612 363 aa14.26□□□□□ -0.13
HDAC4-205ENST00000454542 SLC45A4Q5BKX6 768 aa14.26□□□□□ -0.13
HDAC4-205ENST00000454542 CFAP58Q5T655 872 aa14.26□□□□□ -0.13
HDAC4-205ENST00000454542 ERAP2Q6P179 960 aa14.26□□□□□ -0.13
HDAC4-205ENST00000454542 PIP4P1Q86T03 277 aa14.26□□□□□ -0.13
HDAC4-205ENST00000454542 SPATS2Q86XZ4 545 aaKnown RBP14.26□□□□□ -0.13
HDAC4-205ENST00000454542 UBL4BQ8N7F7 174 aa14.26□□□□□ -0.13
HDAC4-205ENST00000454542 TP53I13Q8NBR0 393 aaPredicted RBP14.26□□□□□ -0.13
HDAC4-205ENST00000454542 CXorf40AQ8TE69 158 aa14.26□□□□□ -0.13
HDAC4-205ENST00000454542 KLK6Q92876 244 aa14.26□□□□□ -0.13
HDAC4-205ENST00000454542 ERVMER34-1Q9H9K5 563 aa14.26□□□□□ -0.13
HDAC4-205ENST00000454542 IL21RQ9HBE5 538 aa14.26□□□□□ -0.13
HDAC4-205ENST00000454542 AASDHPPTQ9NRN7 309 aa14.26□□□□□ -0.13
HDAC4-205ENST00000454542 CA5BQ9Y2D0 317 aa14.26□□□□□ -0.13
HDAC4-205ENST00000454542 PCDHGC4Q9Y5F7 938 aa14.26□□□□□ -0.13
HDAC4-205ENST00000454542 PCDHGB2Q9Y5G2 931 aa14.26□□□□□ -0.13
HDAC4-205ENST00000454542 RAI2Q9Y5P3 530 aa14.26□□□□□ -0.13
HDAC4-205ENST00000454542 HS3ST3A1Q9Y663 406 aa14.26□□□□□ -0.13
HDAC4-205ENST00000454542 COL5A1P20908 1838 aaPredicted RBP14.25□□□□□ -0.13
HDAC4-205ENST00000454542 A6NNZ2 444 aa14.25□□□□□ -0.13
HDAC4-205ENST00000454542 H0Y8X5 98 aa14.25□□□□□ -0.13
HDAC4-205ENST00000454542 TLR4O00206 839 aa14.25□□□□□ -0.13
HDAC4-205ENST00000454542 NEMP1O14524 444 aa14.25□□□□□ -0.13
HDAC4-205ENST00000454542 NRDCO43847 1150 aa14.25□□□□□ -0.13
HDAC4-205ENST00000454542 TM7SF2O76062 418 aa14.25□□□□□ -0.13
HDAC4-205ENST00000454542 JCHAINP01591 159 aa14.25□□□□□ -0.13
HDAC4-205ENST00000454542 PRKCGP05129 697 aa14.25□□□□□ -0.13
HDAC4-205ENST00000454542 CD59P13987 128 aa14.25□□□□□ -0.13
HDAC4-205ENST00000454542 XPAP23025 273 aaPredicted RBP14.25□□□□□ -0.13
HDAC4-205ENST00000454542 PTPN3P26045 913 aa14.25□□□□□ -0.13
HDAC4-205ENST00000454542 IGFALSP35858 605 aa14.25□□□□□ -0.13
HDAC4-205ENST00000454542 C21orf59P57076 290 aa14.25□□□□□ -0.13
HDAC4-205ENST00000454542 POLR2LP62875 67 aaKnown RBP14.25□□□□□ -0.13
HDAC4-205ENST00000454542 SKOR1P84550 965 aa14.25□□□□□ -0.13
HDAC4-205ENST00000454542 AP1B1Q10567 949 aa14.25□□□□□ -0.13
HDAC4-205ENST00000454542 WASHC5Q12768 1159 aa14.25□□□□□ -0.13
HDAC4-205ENST00000454542 XRCC4Q13426 336 aa14.25□□□□□ -0.13
HDAC4-205ENST00000454542 SHBQ15464 509 aa14.25□□□□□ -0.13
HDAC4-205ENST00000454542 AADACL2Q6P093 401 aa14.25□□□□□ -0.13
HDAC4-205ENST00000454542 DBX2Q6ZNG2 339 aa14.25□□□□□ -0.13
HDAC4-205ENST00000454542 ADAT2Q7Z6V5 191 aaKnown RBP14.25□□□□□ -0.13
HDAC4-205ENST00000454542 SLC22A18ASQ8N1D0 253 aa14.25□□□□□ -0.13
HDAC4-205ENST00000454542 TFB1MQ8WVM0 346 aaKnown RBP14.25□□□□□ -0.13
HDAC4-205ENST00000454542 PIH1D2Q8WWB5 315 aa14.25□□□□□ -0.13
HDAC4-205ENST00000454542 P3H4Q92791 437 aa14.25□□□□□ -0.13
HDAC4-205ENST00000454542 SKA1Q96BD8 255 aa14.25□□□□□ -0.13
HDAC4-205ENST00000454542 CENPTQ96BT3 561 aa14.25□□□□□ -0.13
HDAC4-205ENST00000454542 BMFQ96LC9 184 aa14.25□□□□□ -0.13
HDAC4-205ENST00000454542 KCNF1Q9H3M0 494 aa14.25□□□□□ -0.13
HDAC4-205ENST00000454542 GAREM1Q9H706 876 aa14.25□□□□□ -0.13
HDAC4-205ENST00000454542 B4GALT6Q9UBX8 382 aa14.25□□□□□ -0.13
HDAC4-205ENST00000454542 PHTF1Q9UMS5 762 aa14.25□□□□□ -0.13
HDAC4-205ENST00000454542 GUCA1BQ9UMX6 200 aa14.25□□□□□ -0.13
HDAC4-205ENST00000454542 PPP2R2CQ9Y2T4 447 aa14.25□□□□□ -0.13
HDAC4-205ENST00000454542 PCDHB9Q9Y5E1 797 aa14.25□□□□□ -0.13
HDAC4-205ENST00000454542 LRP4O75096 1905 aa14.25□□□□□ -0.13
HDAC4-205ENST00000454542 A0A1B0GTQ1 180 aa14.24□□□□□ -0.13
HDAC4-205ENST00000454542 MTSS1O43312 755 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms