RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 ZNF487B1APH4 448 aa12.04□□□□□ -0.48
SMPD4-213ENST00000454468 G3V2L1 256 aa12.04□□□□□ -0.48
SMPD4-213ENST00000454468 PEX1O43933 1283 aa12.04□□□□□ -0.48
SMPD4-213ENST00000454468 CABYRO75952 493 aa12.04□□□□□ -0.48
SMPD4-213ENST00000454468 GUCA1CO95843 209 aa12.04□□□□□ -0.48
SMPD4-213ENST00000454468 NELFEP18615 380 aaKnown RBP12.04□□□□□ -0.48
SMPD4-213ENST00000454468 DSG1Q02413 1049 aa12.04□□□□□ -0.48
SMPD4-213ENST00000454468 CDK18Q07002 472 aa12.04□□□□□ -0.48
SMPD4-213ENST00000454468 LBRQ14739 615 aaKnown RBP12.04□□□□□ -0.48
SMPD4-213ENST00000454468 PPP1R3AQ16821 1122 aa12.04□□□□□ -0.48
SMPD4-213ENST00000454468 INSCQ1MX18 579 aa12.04□□□□□ -0.48
SMPD4-213ENST00000454468 RAB41Q5JT25 222 aa12.04□□□□□ -0.48
SMPD4-213ENST00000454468 FAM171BQ6P995 826 aa12.04□□□□□ -0.48
SMPD4-213ENST00000454468 GLT6D1Q7Z4J2 308 aa12.04□□□□□ -0.48
SMPD4-213ENST00000454468 PTGR2Q8N8N7 351 aaPredicted RBP12.04□□□□□ -0.48
SMPD4-213ENST00000454468 OR4K2Q8NGD2 314 aa12.04□□□□□ -0.48
SMPD4-213ENST00000454468 OR9I1Q8NGQ6 314 aa12.04□□□□□ -0.48
SMPD4-213ENST00000454468 SLC45A3Q96JT2 553 aa12.04□□□□□ -0.48
SMPD4-213ENST00000454468 OSBPL2Q9H1P3 480 aa12.04□□□□□ -0.48
SMPD4-213ENST00000454468 SMOC2Q9H3U7 446 aa12.04□□□□□ -0.48
SMPD4-213ENST00000454468 PCDHB8Q9UN66 801 aa12.04□□□□□ -0.48
SMPD4-213ENST00000454468 TIMM22Q9Y584 194 aa12.04□□□□□ -0.48
SMPD4-213ENST00000454468 PTGDR2Q9Y5Y4 395 aa12.04□□□□□ -0.48
SMPD4-213ENST00000454468 UBDO15205 165 aa12.04□□□□□ -0.48
SMPD4-213ENST00000454468 STX7O15400 261 aaKnown RBP12.04□□□□□ -0.48
SMPD4-213ENST00000454468 SNX2O60749 519 aa12.04□□□□□ -0.48
SMPD4-213ENST00000454468 KATNA1O75449 491 aa12.04□□□□□ -0.48
SMPD4-213ENST00000454468 APOA4P06727 396 aa12.04□□□□□ -0.48
SMPD4-213ENST00000454468 MBL2P11226 248 aaPredicted RBP12.04□□□□□ -0.48
SMPD4-213ENST00000454468 HOXD10P28358 340 aa12.04□□□□□ -0.48
SMPD4-213ENST00000454468 ATP5C1P36542 298 aaKnown RBP12.04□□□□□ -0.48
SMPD4-213ENST00000454468 HCAR3P49019 387 aa12.04□□□□□ -0.48
SMPD4-213ENST00000454468 SLC11A2P49281 568 aa12.04□□□□□ -0.48
SMPD4-213ENST00000454468 SCAPQ12770 1279 aa12.04□□□□□ -0.48
SMPD4-213ENST00000454468 PTK2BQ14289 1009 aa12.04□□□□□ -0.48
SMPD4-213ENST00000454468 DBN1Q16643 649 aa12.04□□□□□ -0.48
SMPD4-213ENST00000454468 PM20D1Q6GTS8 502 aa12.04□□□□□ -0.48
SMPD4-213ENST00000454468 MRNIPQ6NTE8 343 aa12.04□□□□□ -0.48
SMPD4-213ENST00000454468 FUT10Q6P4F1 479 aa12.04□□□□□ -0.48
SMPD4-213ENST00000454468 TAS1R1Q7RTX1 841 aa12.04□□□□□ -0.48
SMPD4-213ENST00000454468 TXNDC5Q8NBS9 432 aaKnown RBP12.04□□□□□ -0.48
SMPD4-213ENST00000454468 ZNF419Q96HQ0 510 aaPredicted RBP12.04□□□□□ -0.48
SMPD4-213ENST00000454468 HAPLN3Q96S86 360 aa12.04□□□□□ -0.48
SMPD4-213ENST00000454468 ZNF184Q99676 751 aaPredicted RBP12.04□□□□□ -0.48
SMPD4-213ENST00000454468 GPR63Q9BZJ6 419 aa12.04□□□□□ -0.48
SMPD4-213ENST00000454468 TRIM8Q9BZR9 551 aa12.04□□□□□ -0.48
SMPD4-213ENST00000454468 HMX1Q9NP08 348 aaPredicted RBP12.04□□□□□ -0.48
SMPD4-213ENST00000454468 HACD3Q9P035 362 aa12.04□□□□□ -0.48
SMPD4-213ENST00000454468 RNF112Q9ULX5 631 aa12.04□□□□□ -0.48
SMPD4-213ENST00000454468 ZFP37Q9Y6Q3 630 aaPredicted RBP12.04□□□□□ -0.48
SMPD4-213ENST00000454468 GON4LQ3T8J9 2241 aa12.04□□□□□ -0.48
SMPD4-213ENST00000454468 TMEM88BA6NKF7 163 aa12.03□□□□□ -0.48
SMPD4-213ENST00000454468 GJB5O95377 273 aa12.03□□□□□ -0.48
SMPD4-213ENST00000454468 LTA4HP09960 611 aaKnown RBP12.03□□□□□ -0.48
SMPD4-213ENST00000454468 CRABP2P29373 138 aa12.03□□□□□ -0.48
SMPD4-213ENST00000454468 CYP2C18P33260 490 aa12.03□□□□□ -0.48
SMPD4-213ENST00000454468 BTKQ06187 659 aa12.03□□□□□ -0.48
SMPD4-213ENST00000454468 CYTH1Q15438 398 aa12.03□□□□□ -0.48
SMPD4-213ENST00000454468 SIRPB2Q5JXA9 342 aa12.03□□□□□ -0.48
SMPD4-213ENST00000454468 RTP2Q5QGT7 225 aa12.03□□□□□ -0.48
SMPD4-213ENST00000454468 IYDQ6PHW0 289 aa12.03□□□□□ -0.48
SMPD4-213ENST00000454468 ZNF598Q86UK7 904 aaKnown RBP12.03□□□□□ -0.48
SMPD4-213ENST00000454468 BHLHE22Q8NFJ8 381 aaPredicted RBP12.03□□□□□ -0.48
SMPD4-213ENST00000454468 NRG4Q8WWG1 115 aa12.03□□□□□ -0.48
SMPD4-213ENST00000454468 BTN2A3PQ96KV6 586 aa12.03□□□□□ -0.48
SMPD4-213ENST00000454468 GPR22Q99680 433 aa12.03□□□□□ -0.48
SMPD4-213ENST00000454468 OLFM1Q99784 485 aa12.03□□□□□ -0.48
SMPD4-213ENST00000454468 GORASP1Q9BQQ3 440 aa12.03□□□□□ -0.48
SMPD4-213ENST00000454468 WDR41Q9HAD4 459 aa12.03□□□□□ -0.48
SMPD4-213ENST00000454468 SCUBE2Q9NQ36 999 aa12.03□□□□□ -0.48
SMPD4-213ENST00000454468 CD274Q9NZQ7 290 aa12.03□□□□□ -0.48
SMPD4-213ENST00000454468 MKI67P46013 3256 aaKnown RBP12.03□□□□□ -0.48
SMPD4-213ENST00000454468 GOT2P00505 430 aaKnown RBP12.03□□□□□ -0.48
SMPD4-213ENST00000454468 ATP6V1C1P21283 382 aa12.03□□□□□ -0.48
SMPD4-213ENST00000454468 KCNA5P22460 613 aa12.03□□□□□ -0.48
SMPD4-213ENST00000454468 PEX2P28328 305 aa12.03□□□□□ -0.48
SMPD4-213ENST00000454468 SLC11A1P49279 550 aa12.03□□□□□ -0.48
SMPD4-213ENST00000454468 SEMA3BQ13214 749 aa12.03□□□□□ -0.48
SMPD4-213ENST00000454468 TSTD2Q5T7W7 516 aa12.03□□□□□ -0.48
SMPD4-213ENST00000454468 RNF220Q5VTB9 566 aa12.03□□□□□ -0.48
SMPD4-213ENST00000454468 ZYG11AQ6WRX3 759 aa12.03□□□□□ -0.48
SMPD4-213ENST00000454468 LRRC8DQ7L1W4 858 aa12.03□□□□□ -0.48
SMPD4-213ENST00000454468 TMEM173Q86WV6 379 aaPredicted RBP12.03□□□□□ -0.48
SMPD4-213ENST00000454468 CCDC97Q96F63 343 aaPredicted RBP12.03□□□□□ -0.48
SMPD4-213ENST00000454468 TSPAN17Q96FV3 270 aa12.03□□□□□ -0.48
SMPD4-213ENST00000454468 CNBD2Q96M20 576 aa12.03□□□□□ -0.48
SMPD4-213ENST00000454468 EGFL8Q99944 293 aa12.03□□□□□ -0.48
SMPD4-213ENST00000454468 SLC25A51Q9H1U9 297 aa12.03□□□□□ -0.48
SMPD4-213ENST00000454468 EFCAB1Q9HAE3 211 aa12.03□□□□□ -0.48
SMPD4-213ENST00000454468 POMPQ9Y244 141 aa12.03□□□□□ -0.48
SMPD4-213ENST00000454468 CEP290O15078 2479 aa12.03□□□□□ -0.48
SMPD4-213ENST00000454468 DPPA5A6NC42 116 aa12.03□□□□□ -0.48
SMPD4-213ENST00000454468 UBXN8O00124 270 aa12.03□□□□□ -0.48
SMPD4-213ENST00000454468 BTN3A1O00481 513 aa12.03□□□□□ -0.48
SMPD4-213ENST00000454468 GPR39O43194 453 aa12.03□□□□□ -0.48
SMPD4-213ENST00000454468 ZNF623O75123 536 aa12.03□□□□□ -0.48
SMPD4-213ENST00000454468 ATP5F1P24539 256 aaPredicted RBP12.03□□□□□ -0.48
SMPD4-213ENST00000454468 WEE1P30291 646 aa12.03□□□□□ -0.48
SMPD4-213ENST00000454468 ALDH1A3P47895 512 aa12.03□□□□□ -0.48
SMPD4-213ENST00000454468 ECT2LQ008S8 904 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms