RNA–Protein interactions for RNA: ENST00000454244.4

LMCD1-205, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-205ENST00000454244 HNF1BP35680 557 aa10.84□□□□□ -0.67
LMCD1-205ENST00000454244 HSPA9P38646 679 aaKnown RBP10.84□□□□□ -0.67
LMCD1-205ENST00000454244 ARSEP51690 589 aa10.84□□□□□ -0.67
LMCD1-205ENST00000454244 TAS2R40P59535 323 aa10.84□□□□□ -0.67
LMCD1-205ENST00000454244 CYP4F3Q08477 520 aa10.84□□□□□ -0.67
LMCD1-205ENST00000454244 RALGDSQ12967 914 aa10.84□□□□□ -0.67
LMCD1-205ENST00000454244 TARDBPQ13148 414 aaKnown RBP eCLIP10.84□□□□□ -0.67
LMCD1-205ENST00000454244 C1orf61Q13536 156 aa10.84□□□□□ -0.67
LMCD1-205ENST00000454244 SLC18A3Q16572 532 aa10.84□□□□□ -0.67
LMCD1-205ENST00000454244 ATP13A4Q4VNC1 1196 aa10.84□□□□□ -0.67
LMCD1-205ENST00000454244 MACC1Q6ZN28 852 aa10.84□□□□□ -0.67
LMCD1-205ENST00000454244 H2AFVQ71UI9 128 aa10.84□□□□□ -0.67
LMCD1-205ENST00000454244 VSTM4Q8IW00 320 aa10.84□□□□□ -0.67
LMCD1-205ENST00000454244 PHACTR4Q8IZ21 702 aa10.84□□□□□ -0.67
LMCD1-205ENST00000454244 PGBD5Q8N414 524 aa10.84□□□□□ -0.67
LMCD1-205ENST00000454244 PDCD7Q8N8D1 485 aaKnown RBP10.84□□□□□ -0.67
LMCD1-205ENST00000454244 NSMCE1Q8WV22 266 aa10.84□□□□□ -0.67
LMCD1-205ENST00000454244 CTNNBL1Q8WYA6 563 aaPredicted RBP10.84□□□□□ -0.67
LMCD1-205ENST00000454244 DNAJC7Q99615 494 aa10.84□□□□□ -0.67
LMCD1-205ENST00000454244 DUSP23Q9BVJ7 150 aa10.84□□□□□ -0.67
LMCD1-205ENST00000454244 TCEAL2Q9H3H9 227 aaPredicted RBP10.84□□□□□ -0.67
LMCD1-205ENST00000454244 ZNHIT6Q9NWK9 470 aaKnown RBP10.84□□□□□ -0.67
LMCD1-205ENST00000454244 RCOR3Q9P2K3 495 aaPredicted RBP10.84□□□□□ -0.67
LMCD1-205ENST00000454244 UVRAGQ9P2Y5 699 aa10.84□□□□□ -0.67
LMCD1-205ENST00000454244 SPASTQ9UBP0 616 aa10.84□□□□□ -0.67
LMCD1-205ENST00000454244 APOBEC3BQ9UH17 382 aaKnown RBP10.84□□□□□ -0.67
LMCD1-205ENST00000454244 PNMA8BQ9ULN7 279 aaPredicted RBP10.84□□□□□ -0.67
LMCD1-205ENST00000454244 CSNK1G3Q9Y6M4 447 aa10.84□□□□□ -0.67
LMCD1-205ENST00000454244 KMT2BQ9UMN6 2715 aaPredicted RBP10.83□□□□□ -0.68
LMCD1-205ENST00000454244 ARID1BQ8NFD5 2236 aaPredicted RBP10.83□□□□□ -0.68
LMCD1-205ENST00000454244 LY6G6EA0A0G2JKS1 128 aa10.83□□□□□ -0.68
LMCD1-205ENST00000454244 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.83□□□□□ -0.68
LMCD1-205ENST00000454244 SSU72P8A0A1W2PR75 194 aa10.83□□□□□ -0.68
LMCD1-205ENST00000454244 TMEM110-MUSTN1A8MSY1 372 aa10.83□□□□□ -0.68
LMCD1-205ENST00000454244 TRAFD1O14545 582 aaPredicted RBP10.83□□□□□ -0.68
LMCD1-205ENST00000454244 MFSD11O43934 449 aa10.83□□□□□ -0.68
LMCD1-205ENST00000454244 AKR1B10O60218 316 aa10.83□□□□□ -0.68
LMCD1-205ENST00000454244 RECQL5O94762 991 aaPredicted RBP10.83□□□□□ -0.68
LMCD1-205ENST00000454244 PCCBP05166 539 aa10.83□□□□□ -0.68
LMCD1-205ENST00000454244 TPM1P09493 284 aa10.83□□□□□ -0.68
LMCD1-205ENST00000454244 CR2P20023 1033 aa10.83□□□□□ -0.68
LMCD1-205ENST00000454244 DUSP3P51452 185 aaPredicted RBP10.83□□□□□ -0.68
LMCD1-205ENST00000454244 MAXP61244 160 aa10.83□□□□□ -0.68
LMCD1-205ENST00000454244 E2F1Q01094 437 aa10.83□□□□□ -0.68
LMCD1-205ENST00000454244 INSM1Q01101 510 aaPredicted RBP10.83□□□□□ -0.68
LMCD1-205ENST00000454244 PPARDQ03181 441 aa10.83□□□□□ -0.68
LMCD1-205ENST00000454244 DPYSL3Q14195 570 aa10.83□□□□□ -0.68
LMCD1-205ENST00000454244 INPP5AQ14642 412 aa10.83□□□□□ -0.68
LMCD1-205ENST00000454244 TSR1Q2NL82 804 aaKnown RBP10.83□□□□□ -0.68
LMCD1-205ENST00000454244 ASTE1Q2TB18 679 aaPredicted RBP10.83□□□□□ -0.68
LMCD1-205ENST00000454244 DEFB133Q30KQ1 61 aa10.83□□□□□ -0.68
LMCD1-205ENST00000454244 PRRT3Q5FWE3 981 aa10.83□□□□□ -0.68
LMCD1-205ENST00000454244 FAXCQ5TGI0 409 aa10.83□□□□□ -0.68
LMCD1-205ENST00000454244 MARC1Q5VT66 337 aa10.83□□□□□ -0.68
LMCD1-205ENST00000454244 LIPIQ6XZB0 460 aa10.83□□□□□ -0.68
LMCD1-205ENST00000454244 DPPA4Q7L190 304 aa10.83□□□□□ -0.68
LMCD1-205ENST00000454244 BBS5Q8N3I7 341 aa10.83□□□□□ -0.68
LMCD1-205ENST00000454244 FAM181AQ8N9Y4 354 aa10.83□□□□□ -0.68
LMCD1-205ENST00000454244 KCTD6Q8NC69 237 aa10.83□□□□□ -0.68
LMCD1-205ENST00000454244 PCDH19Q8TAB3 1148 aa10.83□□□□□ -0.68
LMCD1-205ENST00000454244 FAM71BQ8TC56 605 aa10.83□□□□□ -0.68
LMCD1-205ENST00000454244 PDCD6IPQ8WUM4 868 aaKnown RBP10.83□□□□□ -0.68
LMCD1-205ENST00000454244 BTN2A2Q8WVV5 523 aa10.83□□□□□ -0.68
LMCD1-205ENST00000454244 NUDCD1Q96RS6 583 aa10.83□□□□□ -0.68
LMCD1-205ENST00000454244 CHP1Q99653 195 aa10.83□□□□□ -0.68
LMCD1-205ENST00000454244 IL12RB2Q99665 862 aa10.83□□□□□ -0.68
LMCD1-205ENST00000454244 MGME1Q9BQP7 344 aa10.83□□□□□ -0.68
LMCD1-205ENST00000454244 NOD2Q9HC29 1040 aa10.83□□□□□ -0.68
LMCD1-205ENST00000454244 SCUBE2Q9NQ36 999 aa10.83□□□□□ -0.68
LMCD1-205ENST00000454244 EVA1BQ9NVM1 165 aa10.83□□□□□ -0.68
LMCD1-205ENST00000454244 PCDHGC4Q9Y5F7 938 aa10.83□□□□□ -0.68
LMCD1-205ENST00000454244 U3KQA8 63 aa10.83□□□□□ -0.68
LMCD1-205ENST00000454244 TP53BP1Q12888 1972 aaPredicted RBP10.83□□□□□ -0.68
LMCD1-205ENST00000454244 GOLGA4Q13439 2230 aaKnown RBP10.82□□□□□ -0.68
LMCD1-205ENST00000454244 PLXNB3Q9ULL4 1909 aa10.82□□□□□ -0.68
LMCD1-205ENST00000454244 CFAP69A5D8W1 941 aa10.82□□□□□ -0.68
LMCD1-205ENST00000454244 A8MX80 341 aa10.82□□□□□ -0.68
LMCD1-205ENST00000454244 TPP1O14773 563 aa10.82□□□□□ -0.68
LMCD1-205ENST00000454244 HTRA2O43464 458 aaPredicted RBP10.82□□□□□ -0.68
LMCD1-205ENST00000454244 MFAP3LO75121 409 aa10.82□□□□□ -0.68
LMCD1-205ENST00000454244 GCATO75600 419 aa10.82□□□□□ -0.68
LMCD1-205ENST00000454244 MAP3K6O95382 1288 aa10.82□□□□□ -0.68
LMCD1-205ENST00000454244 MT-CO3P00414 261 aa10.82□□□□□ -0.68
LMCD1-205ENST00000454244 CPP00450 1065 aa10.82□□□□□ -0.68
LMCD1-205ENST00000454244 ANXA6P08133 673 aa10.82□□□□□ -0.68
LMCD1-205ENST00000454244 TMEM253P0C7T8 217 aa10.82□□□□□ -0.68
LMCD1-205ENST00000454244 ELFN1P0C7U0 828 aa10.82□□□□□ -0.68
LMCD1-205ENST00000454244 HTR1BP28222 390 aa10.82□□□□□ -0.68
LMCD1-205ENST00000454244 MMP13P45452 471 aa10.82□□□□□ -0.68
LMCD1-205ENST00000454244 PEX5P50542 639 aa10.82□□□□□ -0.68
LMCD1-205ENST00000454244 ADKP55263 362 aaKnown RBP10.82□□□□□ -0.68
LMCD1-205ENST00000454244 POLR2LP62875 67 aaKnown RBP10.82□□□□□ -0.68
LMCD1-205ENST00000454244 TRAF2Q12933 501 aa10.82□□□□□ -0.68
LMCD1-205ENST00000454244 MTM1Q13496 603 aa10.82□□□□□ -0.68
LMCD1-205ENST00000454244 MESDQ14696 234 aa10.82□□□□□ -0.68
LMCD1-205ENST00000454244 NFATC4Q14934 902 aa10.82□□□□□ -0.68
LMCD1-205ENST00000454244 PAFAH1B3Q15102 231 aaKnown RBP10.82□□□□□ -0.68
LMCD1-205ENST00000454244 AGERQ15109 404 aa10.82□□□□□ -0.68
LMCD1-205ENST00000454244 PDK2Q15119 407 aa10.82□□□□□ -0.68
LMCD1-205ENST00000454244 ALG11Q2TAA5 492 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms