RNA–Protein interactions for RNA: ENST00000453580.1

TNFRSF4-202, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 3

Gene TNFRSF4, Length 393 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-202ENST00000453580 SCNN1BP51168 640 aa17.21■□□□□ 0.35
TNFRSF4-202ENST00000453580 CDH6P55285 790 aa17.21■□□□□ 0.35
TNFRSF4-202ENST00000453580 KRT81Q14533 505 aa17.21■□□□□ 0.35
TNFRSF4-202ENST00000453580 ELOCQ15369 112 aa17.21■□□□□ 0.35
TNFRSF4-202ENST00000453580 ZNF542PQ5EBM4 170 aa17.21■□□□□ 0.35
TNFRSF4-202ENST00000453580 CCDC122Q5T0U0 273 aa17.21■□□□□ 0.35
TNFRSF4-202ENST00000453580 LVRNQ6Q4G3 990 aa17.21■□□□□ 0.35
TNFRSF4-202ENST00000453580 CAMK1DQ8IU85 385 aa17.21■□□□□ 0.35
TNFRSF4-202ENST00000453580 MAP7D3Q8IWC1 876 aa17.21■□□□□ 0.35
TNFRSF4-202ENST00000453580 PHACTR4Q8IZ21 702 aa17.21■□□□□ 0.35
TNFRSF4-202ENST00000453580 NDUFAF2Q8N183 169 aa17.21■□□□□ 0.35
TNFRSF4-202ENST00000453580 ATPAF2Q8N5M1 289 aa17.21■□□□□ 0.35
TNFRSF4-202ENST00000453580 TP53I13Q8NBR0 393 aaPredicted RBP17.21■□□□□ 0.35
TNFRSF4-202ENST00000453580 LMX1AQ8TE12 382 aa17.21■□□□□ 0.35
TNFRSF4-202ENST00000453580 SPOCK2Q92563 424 aa17.21■□□□□ 0.35
TNFRSF4-202ENST00000453580 DEPDC7Q96QD5 511 aa17.21■□□□□ 0.35
TNFRSF4-202ENST00000453580 DOLKQ9UPQ8 538 aa17.21■□□□□ 0.35
TNFRSF4-202ENST00000453580 AK5Q9Y6K8 562 aa17.21■□□□□ 0.35
TNFRSF4-202ENST00000453580 FAM208BQ5VWN6 2430 aa17.2■□□□□ 0.34
TNFRSF4-202ENST00000453580 A0A087X0T9 212 aa17.2■□□□□ 0.34
TNFRSF4-202ENST00000453580 TAF4O00268 1085 aa17.2■□□□□ 0.34
TNFRSF4-202ENST00000453580 SOCS5O75159 536 aa17.2■□□□□ 0.34
TNFRSF4-202ENST00000453580 FAM228BP0C875 321 aa17.2■□□□□ 0.34
TNFRSF4-202ENST00000453580 RARAP10276 462 aa17.2■□□□□ 0.34
TNFRSF4-202ENST00000453580 C6P13671 934 aa17.2■□□□□ 0.34
TNFRSF4-202ENST00000453580 HNRNPH3P31942 346 aaKnown RBP17.2■□□□□ 0.34
TNFRSF4-202ENST00000453580 LIG3P49916 1009 aa17.2■□□□□ 0.34
TNFRSF4-202ENST00000453580 MTM1Q13496 603 aa17.2■□□□□ 0.34
TNFRSF4-202ENST00000453580 RTP5Q14D33 572 aa17.2■□□□□ 0.34
TNFRSF4-202ENST00000453580 SMTNL2Q2TAL5 461 aa17.2■□□□□ 0.34
TNFRSF4-202ENST00000453580 ZSCAN23Q3MJ62 389 aa17.2■□□□□ 0.34
TNFRSF4-202ENST00000453580 LRRC73Q5JTD7 316 aa17.2■□□□□ 0.34
TNFRSF4-202ENST00000453580 ESRP1Q6NXG1 681 aaKnown RBP17.2■□□□□ 0.34
TNFRSF4-202ENST00000453580 NPWQ8N729 165 aa17.2■□□□□ 0.34
TNFRSF4-202ENST00000453580 DCBLD1Q8N8Z6 715 aa17.2■□□□□ 0.34
TNFRSF4-202ENST00000453580 CTNNBL1Q8WYA6 563 aaPredicted RBP17.2■□□□□ 0.34
TNFRSF4-202ENST00000453580 NAT6Q93015 286 aa17.2■□□□□ 0.34
TNFRSF4-202ENST00000453580 ECHDC3Q96DC8 303 aa17.2■□□□□ 0.34
TNFRSF4-202ENST00000453580 CSPG4P5Q96PW8 444 aa17.2■□□□□ 0.34
TNFRSF4-202ENST00000453580 UVRAGQ9P2Y5 699 aa17.2■□□□□ 0.34
TNFRSF4-202ENST00000453580 AKAP13Q12802 2813 aa17.19■□□□□ 0.34
TNFRSF4-202ENST00000453580 LMO7DNF2Z398 122 aa17.19■□□□□ 0.34
TNFRSF4-202ENST00000453580 PDE2AO00408 941 aaPredicted RBP17.19■□□□□ 0.34
TNFRSF4-202ENST00000453580 BUB1BO60566 1050 aaPredicted RBP17.19■□□□□ 0.34
TNFRSF4-202ENST00000453580 RASGRP1O95267 797 aa17.19■□□□□ 0.34
TNFRSF4-202ENST00000453580 MT-CO3P00414 261 aa17.19■□□□□ 0.34
TNFRSF4-202ENST00000453580 GYPCP04921 128 aa17.19■□□□□ 0.34
TNFRSF4-202ENST00000453580 KRT7P08729 469 aa17.19■□□□□ 0.34
TNFRSF4-202ENST00000453580 H2AFZP0C0S5 128 aa17.19■□□□□ 0.34
TNFRSF4-202ENST00000453580 ELFN1P0C7U0 828 aa17.19■□□□□ 0.34
TNFRSF4-202ENST00000453580 GIMD1P0DJR0 217 aa17.19■□□□□ 0.34
TNFRSF4-202ENST00000453580 CTSEP14091 401 aa17.19■□□□□ 0.34
TNFRSF4-202ENST00000453580 AMPD1P23109 780 aa17.19■□□□□ 0.34
TNFRSF4-202ENST00000453580 CES1P23141 567 aa17.19■□□□□ 0.34
TNFRSF4-202ENST00000453580 IL1R2P27930 398 aa17.19■□□□□ 0.34
TNFRSF4-202ENST00000453580 CASP14P31944 242 aa17.19■□□□□ 0.34
TNFRSF4-202ENST00000453580 SSR1P43307 286 aaKnown RBP17.19■□□□□ 0.34
TNFRSF4-202ENST00000453580 INSM1Q01101 510 aaPredicted RBP17.19■□□□□ 0.34
TNFRSF4-202ENST00000453580 EIF2B5Q13144 721 aaKnown RBP17.19■□□□□ 0.34
TNFRSF4-202ENST00000453580 IRF4Q15306 451 aa17.19■□□□□ 0.34
TNFRSF4-202ENST00000453580 NR0B2Q15466 257 aa17.19■□□□□ 0.34
TNFRSF4-202ENST00000453580 PRRT3Q5FWE3 981 aa17.19■□□□□ 0.34
TNFRSF4-202ENST00000453580 MARC1Q5VT66 337 aa17.19■□□□□ 0.34
TNFRSF4-202ENST00000453580 H2AFVQ71UI9 128 aa17.19■□□□□ 0.34
TNFRSF4-202ENST00000453580 LSMEM2Q8N112 164 aa17.19■□□□□ 0.34
TNFRSF4-202ENST00000453580 NETO2Q8NC67 525 aa17.19■□□□□ 0.34
TNFRSF4-202ENST00000453580 NUDCD1Q96RS6 583 aa17.19■□□□□ 0.34
TNFRSF4-202ENST00000453580 DEF6Q9H4E7 631 aa17.19■□□□□ 0.34
TNFRSF4-202ENST00000453580 LHX6Q9UPM6 363 aa17.19■□□□□ 0.34
TNFRSF4-202ENST00000453580 LRRK1Q38SD2 2015 aa17.19■□□□□ 0.34
TNFRSF4-202ENST00000453580 CACNB4O00305 520 aaPredicted RBP17.18■□□□□ 0.34
TNFRSF4-202ENST00000453580 RRP8O43159 456 aaKnown RBP17.18■□□□□ 0.34
TNFRSF4-202ENST00000453580 OPA1O60313 960 aa17.18■□□□□ 0.34
TNFRSF4-202ENST00000453580 CYP2A6P11509 494 aaPredicted RBP17.18■□□□□ 0.34
TNFRSF4-202ENST00000453580 ACTN2P35609 894 aa17.18■□□□□ 0.34
TNFRSF4-202ENST00000453580 HK3P52790 923 aa17.18■□□□□ 0.34
TNFRSF4-202ENST00000453580 NFATC4Q14934 902 aa17.18■□□□□ 0.34
TNFRSF4-202ENST00000453580 PDK2Q15119 407 aa17.18■□□□□ 0.34
TNFRSF4-202ENST00000453580 WSCD2Q2TBF2 565 aa17.18■□□□□ 0.34
TNFRSF4-202ENST00000453580 SPECC1LQ69YQ0 1117 aa17.18■□□□□ 0.34
TNFRSF4-202ENST00000453580 TIGD7Q6NT04 549 aaPredicted RBP17.18■□□□□ 0.34
TNFRSF4-202ENST00000453580 LRRC69Q6ZNQ3 347 aa17.18■□□□□ 0.34
TNFRSF4-202ENST00000453580 DPPA4Q7L190 304 aa17.18■□□□□ 0.34
TNFRSF4-202ENST00000453580 GKN2Q86XP6 184 aa17.18■□□□□ 0.34
TNFRSF4-202ENST00000453580 OR8K1Q8NGG5 319 aa17.18■□□□□ 0.34
TNFRSF4-202ENST00000453580 ZNF564Q8TBZ8 553 aaPredicted RBP17.18■□□□□ 0.34
TNFRSF4-202ENST00000453580 MAPK15Q8TD08 544 aa17.18■□□□□ 0.34
TNFRSF4-202ENST00000453580 APOOQ9BUR5 198 aa17.18■□□□□ 0.34
TNFRSF4-202ENST00000453580 PCDH18Q9HCL0 1135 aa17.18■□□□□ 0.34
TNFRSF4-202ENST00000453580 MBNL1Q9NR56 388 aaKnown RBP17.18■□□□□ 0.34
TNFRSF4-202ENST00000453580 CTTNBP2NLQ9P2B4 639 aa17.18■□□□□ 0.34
TNFRSF4-202ENST00000453580 RAXQ9Y2V3 346 aa17.18■□□□□ 0.34
TNFRSF4-202ENST00000453580 GPSM3Q9Y4H4 160 aa17.18■□□□□ 0.34
TNFRSF4-202ENST00000453580 SSU72P8A0A1W2PR75 194 aa17.17■□□□□ 0.34
TNFRSF4-202ENST00000453580 EME2A4GXA9 379 aaPredicted RBP17.17■□□□□ 0.34
TNFRSF4-202ENST00000453580 NEBLO76041 1014 aa17.17■□□□□ 0.34
TNFRSF4-202ENST00000453580 HOXC4P09017 264 aaPredicted RBP17.17■□□□□ 0.34
TNFRSF4-202ENST00000453580 MMP13P45452 471 aa17.17■□□□□ 0.34
TNFRSF4-202ENST00000453580 ADKP55263 362 aaKnown RBP17.17■□□□□ 0.34
TNFRSF4-202ENST00000453580 SLC25A11Q02978 314 aaKnown RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms