RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 HLA-DQB2P05538 268 aa8.79□□□□□ -1
COL28A1-205ENST00000453441 UGT2B4P06133 528 aa8.79□□□□□ -1
COL28A1-205ENST00000453441 ITGAVP06756 1048 aa8.79□□□□□ -1
COL28A1-205ENST00000453441 CTSLP07711 333 aa8.79□□□□□ -1
COL28A1-205ENST00000453441 GOLGA6DP0CG33 693 aa8.79□□□□□ -1
COL28A1-205ENST00000453441 XPAP23025 273 aaPredicted RBP8.79□□□□□ -1
COL28A1-205ENST00000453441 PTPN3P26045 913 aa8.79□□□□□ -1
COL28A1-205ENST00000453441 CASQ1P31415 396 aa8.79□□□□□ -1
COL28A1-205ENST00000453441 DRD3P35462 400 aa8.79□□□□□ -1
COL28A1-205ENST00000453441 ACTN2P35609 894 aa8.79□□□□□ -1
COL28A1-205ENST00000453441 GMPRP36959 345 aa8.79□□□□□ -1
COL28A1-205ENST00000453441 NBL1P41271 181 aa8.79□□□□□ -1
COL28A1-205ENST00000453441 TNNT3P45378 269 aaPredicted RBP8.79□□□□□ -1
COL28A1-205ENST00000453441 SCNN1BP51168 640 aa8.79□□□□□ -1
COL28A1-205ENST00000453441 ITKQ08881 620 aa8.79□□□□□ -1
COL28A1-205ENST00000453441 ELP6Q0PNE2 266 aa8.79□□□□□ -1
COL28A1-205ENST00000453441 LLGL1Q15334 1064 aa8.79□□□□□ -1
COL28A1-205ENST00000453441 P3H1Q32P28 736 aa8.79□□□□□ -1
COL28A1-205ENST00000453441 AADACL2Q6P093 401 aa8.79□□□□□ -1
COL28A1-205ENST00000453441 ERAP2Q6P179 960 aa8.79□□□□□ -1
COL28A1-205ENST00000453441 FBXL19Q6PCT2 694 aa8.79□□□□□ -1
COL28A1-205ENST00000453441 CEP68Q76N32 757 aa8.79□□□□□ -1
COL28A1-205ENST00000453441 LPCAT2Q7L5N7 544 aa8.79□□□□□ -1
COL28A1-205ENST00000453441 RABEPKQ7Z6M1 372 aa8.79□□□□□ -1
COL28A1-205ENST00000453441 HDDC3Q8N4P3 179 aa8.79□□□□□ -1
COL28A1-205ENST00000453441 PAF1Q8N7H5 531 aa8.79□□□□□ -1
COL28A1-205ENST00000453441 NETO2Q8NC67 525 aa8.79□□□□□ -1
COL28A1-205ENST00000453441 OR2T34Q8NGX1 318 aa8.79□□□□□ -1
COL28A1-205ENST00000453441 GRIN3AQ8TCU5 1115 aa8.79□□□□□ -1
COL28A1-205ENST00000453441 ATOH1Q92858 354 aaPredicted RBP8.79□□□□□ -1
COL28A1-205ENST00000453441 ECHDC3Q96DC8 303 aa8.79□□□□□ -1
COL28A1-205ENST00000453441 RTP4Q96DX8 246 aa8.79□□□□□ -1
COL28A1-205ENST00000453441 EXOC2Q96KP1 924 aa8.79□□□□□ -1
COL28A1-205ENST00000453441 SPATA13Q96N96 652 aa8.79□□□□□ -1
COL28A1-205ENST00000453441 SRPK1Q96SB4 655 aaKnown RBP8.79□□□□□ -1
COL28A1-205ENST00000453441 SEMA3CQ99985 751 aa8.79□□□□□ -1
COL28A1-205ENST00000453441 HERPUD2Q9BSE4 406 aa8.79□□□□□ -1
COL28A1-205ENST00000453441 DUSP15Q9H1R2 295 aaPredicted RBP8.79□□□□□ -1
COL28A1-205ENST00000453441 SUV39H2Q9H5I1 410 aa8.79□□□□□ -1
COL28A1-205ENST00000453441 POLR3BQ9NW08 1133 aaPredicted RBP8.79□□□□□ -1
COL28A1-205ENST00000453441 GOLGA6AQ9NYA3 693 aa8.79□□□□□ -1
COL28A1-205ENST00000453441 WSB2Q9NYS7 404 aaPredicted RBP8.79□□□□□ -1
COL28A1-205ENST00000453441 FEZ2Q9UHY8 353 aaPredicted RBP8.79□□□□□ -1
COL28A1-205ENST00000453441 CYP8B1Q9UNU6 501 aa8.79□□□□□ -1
COL28A1-205ENST00000453441 DRG1Q9Y295 367 aaKnown RBP8.79□□□□□ -1
COL28A1-205ENST00000453441 TTLL3Q9Y4R7 772 aa8.79□□□□□ -1
COL28A1-205ENST00000453441 ACTL7AQ9Y615 435 aa8.79□□□□□ -1
COL28A1-205ENST00000453441 EML5Q05BV3 1969 aa8.79□□□□□ -1
COL28A1-205ENST00000453441 ANKRD36A6QL64 1941 aa8.78□□□□□ -1
COL28A1-205ENST00000453441 A0A1W2PP55 124 aa8.78□□□□□ -1
COL28A1-205ENST00000453441 C16orf96A6NNT2 1141 aa8.78□□□□□ -1
COL28A1-205ENST00000453441 UPK3BL1B0FP48 263 aa8.78□□□□□ -1
COL28A1-205ENST00000453441 UPK3BL2E5RIL1 263 aa8.78□□□□□ -1
COL28A1-205ENST00000453441 H0Y858 1186 aa8.78□□□□□ -1
COL28A1-205ENST00000453441 MUSKO15146 869 aa8.78□□□□□ -1
COL28A1-205ENST00000453441 KCNN4O15554 427 aa8.78□□□□□ -1
COL28A1-205ENST00000453441 HTRA2O43464 458 aaPredicted RBP8.78□□□□□ -1
COL28A1-205ENST00000453441 TSPAN6O43657 245 aa8.78□□□□□ -1
COL28A1-205ENST00000453441 PLRG1O43660 514 aaKnown RBP8.78□□□□□ -1
COL28A1-205ENST00000453441 GCATO75600 419 aa8.78□□□□□ -1
COL28A1-205ENST00000453441 SEMA4FO95754 770 aa8.78□□□□□ -1
COL28A1-205ENST00000453441 EPOP01588 193 aa8.78□□□□□ -1
COL28A1-205ENST00000453441 ADRB3P13945 408 aa8.78□□□□□ -1
COL28A1-205ENST00000453441 RBL1P28749 1068 aa8.78□□□□□ -1
COL28A1-205ENST00000453441 CXCR5P32302 372 aa8.78□□□□□ -1
COL28A1-205ENST00000453441 HOXD12P35452 270 aa8.78□□□□□ -1
COL28A1-205ENST00000453441 PAFAH1B1P43034 410 aa8.78□□□□□ -1
COL28A1-205ENST00000453441 RGRP47804 291 aa8.78□□□□□ -1
COL28A1-205ENST00000453441 PXNP49023 591 aaPredicted RBP8.78□□□□□ -1
COL28A1-205ENST00000453441 CCR5P51681 352 aa8.78□□□□□ -1
COL28A1-205ENST00000453441 ADPRHP54922 357 aa8.78□□□□□ -1
COL28A1-205ENST00000453441 DMWDQ09019 674 aa8.78□□□□□ -1
COL28A1-205ENST00000453441 WASHC5Q12768 1159 aa8.78□□□□□ -1
COL28A1-205ENST00000453441 CNTN1Q12860 1018 aa8.78□□□□□ -1
COL28A1-205ENST00000453441 ZBTB17Q13105 803 aa8.78□□□□□ -1
COL28A1-205ENST00000453441 TUBB2AQ13885 445 aa8.78□□□□□ -1
COL28A1-205ENST00000453441 SIM2Q14190 667 aaPredicted RBP8.78□□□□□ -1
COL28A1-205ENST00000453441 PRPSAP1Q14558 356 aa8.78□□□□□ -1
COL28A1-205ENST00000453441 OASLQ15646 514 aaKnown RBP8.78□□□□□ -1
COL28A1-205ENST00000453441 WDR45BQ5MNZ6 344 aa8.78□□□□□ -1
COL28A1-205ENST00000453441 SYCP2LQ5T4T6 812 aa8.78□□□□□ -1
COL28A1-205ENST00000453441 PIP5KL1Q5T9C9 394 aa8.78□□□□□ -1
COL28A1-205ENST00000453441 ARMC12Q5T9G4 340 aa8.78□□□□□ -1
COL28A1-205ENST00000453441 AGBL4Q5VU57 503 aa8.78□□□□□ -1
COL28A1-205ENST00000453441 PMS2CLQ68D20 193 aa8.78□□□□□ -1
COL28A1-205ENST00000453441 KIAA1161Q6NSJ0 714 aa8.78□□□□□ -1
COL28A1-205ENST00000453441 PID1Q7Z2X4 250 aa8.78□□□□□ -1
COL28A1-205ENST00000453441 RAVER1Q8IY67 606 aaKnown RBP8.78□□□□□ -1
COL28A1-205ENST00000453441 PGBD5Q8N414 524 aa8.78□□□□□ -1
COL28A1-205ENST00000453441 AADATQ8N5Z0 425 aa8.78□□□□□ -1
COL28A1-205ENST00000453441 CNTD1Q8N815 330 aa8.78□□□□□ -1
COL28A1-205ENST00000453441 C12orf50Q8NA57 414 aaPredicted RBP8.78□□□□□ -1
COL28A1-205ENST00000453441 OR6K2Q8NGY2 324 aa8.78□□□□□ -1
COL28A1-205ENST00000453441 ARRDC2Q8TBH0 407 aa8.78□□□□□ -1
COL28A1-205ENST00000453441 IMP4Q96G21 291 aaKnown RBP8.78□□□□□ -1
COL28A1-205ENST00000453441 TOE1Q96GM8 510 aaKnown RBP8.78□□□□□ -1
COL28A1-205ENST00000453441 KLHL32Q96NJ5 620 aa8.78□□□□□ -1
COL28A1-205ENST00000453441 RUNDC3BQ96NL0 473 aa8.78□□□□□ -1
COL28A1-205ENST00000453441 AGAP3Q96P47 875 aa8.78□□□□□ -1
COL28A1-205ENST00000453441 FCRL5Q96RD9 977 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms