RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 TMEM176AQ96HP8 235 aa13.56□□□□□ -0.24
SYNGAP1-204ENST00000449372 ABHD16BQ9H3Z7 469 aa13.56□□□□□ -0.24
SYNGAP1-204ENST00000449372 THG1LQ9NWX6 298 aaKnown RBP13.56□□□□□ -0.24
SYNGAP1-204ENST00000449372 TCRBV7S3A2A0A539 114 aa13.55□□□□□ -0.24
SYNGAP1-204ENST00000449372 RFPL1O75677 317 aa13.55□□□□□ -0.24
SYNGAP1-204ENST00000449372 STAU1O95793 577 aaKnown RBP13.55□□□□□ -0.24
SYNGAP1-204ENST00000449372 KRT6AP02538 564 aa13.55□□□□□ -0.24
SYNGAP1-204ENST00000449372 KRT6BP04259 564 aa13.55□□□□□ -0.24
SYNGAP1-204ENST00000449372 CDH1P12830 882 aa13.55□□□□□ -0.24
SYNGAP1-204ENST00000449372 TCF4P15884 667 aa13.55□□□□□ -0.24
SYNGAP1-204ENST00000449372 CKMT2P17540 419 aa13.55□□□□□ -0.24
SYNGAP1-204ENST00000449372 GRIK4Q16099 956 aa13.55□□□□□ -0.24
SYNGAP1-204ENST00000449372 CST9Q5W186 159 aa13.55□□□□□ -0.24
SYNGAP1-204ENST00000449372 SLC22A16Q86VW1 577 aa13.55□□□□□ -0.24
SYNGAP1-204ENST00000449372 SNX32Q86XE0 403 aa13.55□□□□□ -0.24
SYNGAP1-204ENST00000449372 ZUFSPQ96AP4 578 aa13.55□□□□□ -0.24
SYNGAP1-204ENST00000449372 DHRS9Q9BPW9 319 aa13.55□□□□□ -0.24
SYNGAP1-204ENST00000449372 NOL11Q9H8H0 719 aaKnown RBP13.55□□□□□ -0.24
SYNGAP1-204ENST00000449372 POPDC2Q9HBU9 364 aa13.55□□□□□ -0.24
SYNGAP1-204ENST00000449372 POLE4Q9NR33 117 aa13.55□□□□□ -0.24
SYNGAP1-204ENST00000449372 ARMC1Q9NVT9 282 aa13.55□□□□□ -0.24
SYNGAP1-204ENST00000449372 SAE1Q9UBE0 346 aaPredicted RBP13.55□□□□□ -0.24
SYNGAP1-204ENST00000449372 C3orf70A6NLC5 250 aaPredicted RBP13.55□□□□□ -0.24
SYNGAP1-204ENST00000449372 TSPAN9O75954 239 aa13.55□□□□□ -0.24
SYNGAP1-204ENST00000449372 HSPA1AP0DMV8 641 aaKnown RBP13.55□□□□□ -0.24
SYNGAP1-204ENST00000449372 HSPA1BP0DMV9 641 aaKnown RBP13.55□□□□□ -0.24
SYNGAP1-204ENST00000449372 CD1EP15812 388 aa13.55□□□□□ -0.24
SYNGAP1-204ENST00000449372 ZNF135P52742 658 aaPredicted RBP13.55□□□□□ -0.24
SYNGAP1-204ENST00000449372 ECT2LQ008S8 904 aa13.55□□□□□ -0.24
SYNGAP1-204ENST00000449372 EIF2B5Q13144 721 aaKnown RBP13.55□□□□□ -0.24
SYNGAP1-204ENST00000449372 ART3Q13508 389 aa13.55□□□□□ -0.24
SYNGAP1-204ENST00000449372 GRTP1Q5TC63 336 aa13.55□□□□□ -0.24
SYNGAP1-204ENST00000449372 PLEKHH3Q7Z736 793 aa13.55□□□□□ -0.24
SYNGAP1-204ENST00000449372 FAM156AQ8NDB6 213 aa13.55□□□□□ -0.24
SYNGAP1-204ENST00000449372 TXNDC15Q96J42 360 aa13.55□□□□□ -0.24
SYNGAP1-204ENST00000449372 TWNKQ96RR1 684 aa13.55□□□□□ -0.24
SYNGAP1-204ENST00000449372 YME1L1Q96TA2 773 aa13.55□□□□□ -0.24
SYNGAP1-204ENST00000449372 C2orf49Q9BVC5 232 aaPredicted RBP13.55□□□□□ -0.24
SYNGAP1-204ENST00000449372 STX16-NPEPL1H3BU86 382 aa13.55□□□□□ -0.24
SYNGAP1-204ENST00000449372 GPR32O75388 356 aa13.55□□□□□ -0.24
SYNGAP1-204ENST00000449372 POLBP06746 335 aa13.55□□□□□ -0.24
SYNGAP1-204ENST00000449372 HOXA11P31270 313 aaPredicted RBP13.55□□□□□ -0.24
SYNGAP1-204ENST00000449372 ETV3P41162 512 aa13.55□□□□□ -0.24
SYNGAP1-204ENST00000449372 RPL10AP62906 217 aaKnown RBP13.55□□□□□ -0.24
SYNGAP1-204ENST00000449372 PPP2R2BQ00005 443 aa13.55□□□□□ -0.24
SYNGAP1-204ENST00000449372 N4BP2L1Q5TBK1 243 aaPredicted RBP13.55□□□□□ -0.24
SYNGAP1-204ENST00000449372 TRIB2Q92519 343 aa13.55□□□□□ -0.24
SYNGAP1-204ENST00000449372 PPWD1Q96BP3 646 aaKnown RBP13.55□□□□□ -0.24
SYNGAP1-204ENST00000449372 CXCL16Q9H2A7 254 aa13.55□□□□□ -0.24
SYNGAP1-204ENST00000449372 HMGXB4Q9UGU5 601 aa13.55□□□□□ -0.24
SYNGAP1-204ENST00000449372 SLC15A5A6NIM6 579 aa13.54□□□□□ -0.24
SYNGAP1-204ENST00000449372 MPOP05164 745 aa13.54□□□□□ -0.24
SYNGAP1-204ENST00000449372 PGAM1P18669 254 aa13.54□□□□□ -0.24
SYNGAP1-204ENST00000449372 GP5P40197 560 aa13.54□□□□□ -0.24
SYNGAP1-204ENST00000449372 ABCE1P61221 599 aaKnown RBP13.54□□□□□ -0.24
SYNGAP1-204ENST00000449372 CLCQ05315 142 aa13.54□□□□□ -0.24
SYNGAP1-204ENST00000449372 MAPK11Q15759 364 aa13.54□□□□□ -0.24
SYNGAP1-204ENST00000449372 JOSD2Q8TAC2 188 aa13.54□□□□□ -0.24
SYNGAP1-204ENST00000449372 RXFP2Q8WXD0 754 aa13.54□□□□□ -0.24
SYNGAP1-204ENST00000449372 PARK7Q99497 189 aaKnown RBP13.54□□□□□ -0.24
SYNGAP1-204ENST00000449372 IRF2BPLQ9H1B7 796 aa13.54□□□□□ -0.24
SYNGAP1-204ENST00000449372 C12orf4Q9NQ89 552 aa13.54□□□□□ -0.24
SYNGAP1-204ENST00000449372 VPS28Q9UK41 221 aa13.54□□□□□ -0.24
SYNGAP1-204ENST00000449372 CILPO75339 1184 aa13.54□□□□□ -0.24
SYNGAP1-204ENST00000449372 TOP3BO95985 862 aaKnown RBP13.54□□□□□ -0.24
SYNGAP1-204ENST00000449372 RAP1GAPP47736 663 aa13.54□□□□□ -0.24
SYNGAP1-204ENST00000449372 SLX4IPQ5VYV7 408 aa13.54□□□□□ -0.24
SYNGAP1-204ENST00000449372 UNC5AQ6ZN44 842 aa13.54□□□□□ -0.24
SYNGAP1-204ENST00000449372 ASCC1Q8N9N2 400 aaKnown RBP13.54□□□□□ -0.24
SYNGAP1-204ENST00000449372 TMA16Q96EY4 203 aaKnown RBP13.54□□□□□ -0.24
SYNGAP1-204ENST00000449372 WDR6Q9NNW5 1121 aaKnown RBP13.54□□□□□ -0.24
SYNGAP1-204ENST00000449372 FLRT1Q9NZU1 646 aa13.54□□□□□ -0.24
SYNGAP1-204ENST00000449372 VTI1BQ9UEU0 232 aa13.54□□□□□ -0.24
SYNGAP1-204ENST00000449372 DGKBQ9Y6T7 804 aa13.54□□□□□ -0.24
SYNGAP1-204ENST00000449372 MBLAC1A4D2B0 266 aaPredicted RBP13.54□□□□□ -0.24
SYNGAP1-204ENST00000449372 ACOT8O14734 319 aa13.54□□□□□ -0.24
SYNGAP1-204ENST00000449372 SNPHO15079 494 aa13.54□□□□□ -0.24
SYNGAP1-204ENST00000449372 IFRD2Q12894 506 aaPredicted RBP13.54□□□□□ -0.24
SYNGAP1-204ENST00000449372 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.54□□□□□ -0.24
SYNGAP1-204ENST00000449372 TXNRD3NBQ6F5E7 133 aa13.54□□□□□ -0.24
SYNGAP1-204ENST00000449372 KCNT2Q6UVM3 1135 aa13.54□□□□□ -0.24
SYNGAP1-204ENST00000449372 BPIFB6Q8NFQ5 453 aa13.54□□□□□ -0.24
SYNGAP1-204ENST00000449372 ANGPTL6Q8NI99 470 aa13.54□□□□□ -0.24
SYNGAP1-204ENST00000449372 GLT1D1Q96MS3 346 aa13.54□□□□□ -0.24
SYNGAP1-204ENST00000449372 CPNE1Q99829 537 aa13.54□□□□□ -0.24
SYNGAP1-204ENST00000449372 IPO11Q9UI26 975 aaKnown RBP13.54□□□□□ -0.24
SYNGAP1-204ENST00000449372 SCN1AP35498 2009 aa13.53□□□□□ -0.24
SYNGAP1-204ENST00000449372 RGSL1A5PLK6 1076 aa13.53□□□□□ -0.24
SYNGAP1-204ENST00000449372 BDNFP23560 247 aa13.53□□□□□ -0.24
SYNGAP1-204ENST00000449372 CDH8P55286 799 aa13.53□□□□□ -0.24
SYNGAP1-204ENST00000449372 INCA1Q0VD86 236 aa13.53□□□□□ -0.24
SYNGAP1-204ENST00000449372 MBLAC2Q68D91 279 aa13.53□□□□□ -0.24
SYNGAP1-204ENST00000449372 CHST15Q7LFX5 561 aaPredicted RBP13.53□□□□□ -0.24
SYNGAP1-204ENST00000449372 ARFGAP1Q8N6T3 406 aa13.53□□□□□ -0.24
SYNGAP1-204ENST00000449372 EMC1Q8N766 993 aa13.53□□□□□ -0.24
SYNGAP1-204ENST00000449372 GIPC2Q8TF65 315 aa13.53□□□□□ -0.24
SYNGAP1-204ENST00000449372 RAB2BQ8WUD1 216 aa13.53□□□□□ -0.24
SYNGAP1-204ENST00000449372 TP53INP1Q96A56 240 aa13.53□□□□□ -0.24
SYNGAP1-204ENST00000449372 TCF12Q99081 682 aa13.53□□□□□ -0.24
SYNGAP1-204ENST00000449372 ELOVL4Q9GZR5 314 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms