RNA–Protein interactions for RNA: ENST00000449086.5

LINC00954-202, long intergenic non-protein coding RNA 954, humanhuman

TSL 1 (best) BASIC

Gene LINC00954, Length 2,995 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00954-202ENST00000449086 PCDHB12Q9Y5F1 795 aa8.19□□□□□ -1.1
LINC00954-202ENST00000449086 A0A087WXM4 84 aa8.18□□□□□ -1.1
LINC00954-202ENST00000449086 KCNU1A8MYU2 1149 aa8.18□□□□□ -1.1
LINC00954-202ENST00000449086 BCAS2O75934 225 aaPredicted RBP8.18□□□□□ -1.1
LINC00954-202ENST00000449086 MT-CO1P00395 513 aa8.18□□□□□ -1.1
LINC00954-202ENST00000449086 ASS1P00966 412 aaKnown RBP8.18□□□□□ -1.1
LINC00954-202ENST00000449086 JUNP05412 331 aaKnown RBP8.18□□□□□ -1.1
LINC00954-202ENST00000449086 LINC00271P0C7V0 271 aa8.18□□□□□ -1.1
LINC00954-202ENST00000449086 HDCP19113 662 aa8.18□□□□□ -1.1
LINC00954-202ENST00000449086 NR4A1P22736 598 aa8.18□□□□□ -1.1
LINC00954-202ENST00000449086 ATICP31939 592 aa8.18□□□□□ -1.1
LINC00954-202ENST00000449086 ALDH3B2P48448 385 aa8.18□□□□□ -1.1
LINC00954-202ENST00000449086 RGS7P49802 495 aa8.18□□□□□ -1.1
LINC00954-202ENST00000449086 NAGLUP54802 743 aa8.18□□□□□ -1.1
LINC00954-202ENST00000449086 CSE1LP55060 971 aaKnown RBP8.18□□□□□ -1.1
LINC00954-202ENST00000449086 ERVK-21P61565 698 aa8.18□□□□□ -1.1
LINC00954-202ENST00000449086 UBE3AQ05086 875 aa8.18□□□□□ -1.1
LINC00954-202ENST00000449086 RGS21Q2M5E4 152 aa8.18□□□□□ -1.1
LINC00954-202ENST00000449086 AARS2Q5JTZ9 985 aaKnown RBP8.18□□□□□ -1.1
LINC00954-202ENST00000449086 PERM1Q5SV97 790 aa8.18□□□□□ -1.1
LINC00954-202ENST00000449086 HEATR6Q6AI08 1181 aaKnown RBP8.18□□□□□ -1.1
LINC00954-202ENST00000449086 GK5Q6ZS86 529 aa8.18□□□□□ -1.1
LINC00954-202ENST00000449086 ALDH16A1Q8IZ83 802 aa8.18□□□□□ -1.1
LINC00954-202ENST00000449086 RXFP2Q8WXD0 754 aa8.18□□□□□ -1.1
LINC00954-202ENST00000449086 ZNF560Q96MR9 790 aa8.18□□□□□ -1.1
LINC00954-202ENST00000449086 ZNF558Q96NG5 402 aa8.18□□□□□ -1.1
LINC00954-202ENST00000449086 COLEC11Q9BWP8 271 aa8.18□□□□□ -1.1
LINC00954-202ENST00000449086 PBX4Q9BYU1 374 aa8.18□□□□□ -1.1
LINC00954-202ENST00000449086 SLC2A11Q9BYW1 496 aa8.18□□□□□ -1.1
LINC00954-202ENST00000449086 FRMD8Q9BZ67 464 aaPredicted RBP8.18□□□□□ -1.1
LINC00954-202ENST00000449086 ZNF518BQ9C0D4 1074 aa8.18□□□□□ -1.1
LINC00954-202ENST00000449086 FAM124BQ9H5Z6 455 aaPredicted RBP8.18□□□□□ -1.1
LINC00954-202ENST00000449086 GID8Q9NWU2 228 aa8.18□□□□□ -1.1
LINC00954-202ENST00000449086 MIOSQ9NXC5 875 aa8.18□□□□□ -1.1
LINC00954-202ENST00000449086 CCDC167Q9P0B6 97 aa8.18□□□□□ -1.1
LINC00954-202ENST00000449086 KLK14Q9P0G3 267 aa8.18□□□□□ -1.1
LINC00954-202ENST00000449086 SFMBT1Q9UHJ3 866 aa8.18□□□□□ -1.1
LINC00954-202ENST00000449086 FADS3Q9Y5Q0 445 aa8.18□□□□□ -1.1
LINC00954-202ENST00000449086 MRPL42Q9Y6G3 142 aaKnown RBP8.18□□□□□ -1.1
LINC00954-202ENST00000449086 KIAA1671Q9BY89 1806 aa8.18□□□□□ -1.1
LINC00954-202ENST00000449086 A0A096LPK6 155 aa8.18□□□□□ -1.1
LINC00954-202ENST00000449086 LINC01553A4QN01 128 aa8.18□□□□□ -1.1
LINC00954-202ENST00000449086 KPNA7A9QM74 516 aa8.18□□□□□ -1.1
LINC00954-202ENST00000449086 CFAP99D6REC4 459 aa8.18□□□□□ -1.1
LINC00954-202ENST00000449086 TK2O00142 265 aa8.18□□□□□ -1.1
LINC00954-202ENST00000449086 HTRA2O43464 458 aaPredicted RBP8.18□□□□□ -1.1
LINC00954-202ENST00000449086 TRIM13O60858 407 aa8.18□□□□□ -1.1
LINC00954-202ENST00000449086 USP12O75317 370 aa8.18□□□□□ -1.1
LINC00954-202ENST00000449086 KCNH1O95259 989 aa8.18□□□□□ -1.1
LINC00954-202ENST00000449086 CNTFP26441 200 aa8.18□□□□□ -1.1
LINC00954-202ENST00000449086 GARSP41250 739 aaKnown RBP8.18□□□□□ -1.1
LINC00954-202ENST00000449086 HARS2P49590 506 aaKnown RBP8.18□□□□□ -1.1
LINC00954-202ENST00000449086 BMXP51813 675 aa8.18□□□□□ -1.1
LINC00954-202ENST00000449086 ELAVL2Q12926 359 aaKnown RBP8.18□□□□□ -1.1
LINC00954-202ENST00000449086 OLIG2Q13516 323 aa8.18□□□□□ -1.1
LINC00954-202ENST00000449086 GLRA4Q5JXX5 417 aa8.18□□□□□ -1.1
LINC00954-202ENST00000449086 FAM109BQ6ICB4 259 aaPredicted RBP8.18□□□□□ -1.1
LINC00954-202ENST00000449086 DCLRE1AQ6PJP8 1040 aa8.18□□□□□ -1.1
LINC00954-202ENST00000449086 XYLT1Q86Y38 959 aa8.18□□□□□ -1.1
LINC00954-202ENST00000449086 DCLK2Q8N568 766 aa8.18□□□□□ -1.1
LINC00954-202ENST00000449086 LZTR1Q8N653 840 aa8.18□□□□□ -1.1
LINC00954-202ENST00000449086 COLGALT1Q8NBJ5 622 aa8.18□□□□□ -1.1
LINC00954-202ENST00000449086 LRRC39Q96DD0 335 aa8.18□□□□□ -1.1
LINC00954-202ENST00000449086 PIWIL1Q96J94 861 aaKnown RBP8.18□□□□□ -1.1
LINC00954-202ENST00000449086 HNRNPABQ99729 332 aaKnown RBP8.18□□□□□ -1.1
LINC00954-202ENST00000449086 NEURL2Q9BR09 285 aa8.18□□□□□ -1.1
LINC00954-202ENST00000449086 GATA5Q9BWX5 397 aaPredicted RBP8.18□□□□□ -1.1
LINC00954-202ENST00000449086 TASP1Q9H6P5 420 aa8.18□□□□□ -1.1
LINC00954-202ENST00000449086 VRTNQ9H8Y1 702 aa8.18□□□□□ -1.1
LINC00954-202ENST00000449086 IL1RL2Q9HB29 575 aa8.18□□□□□ -1.1
LINC00954-202ENST00000449086 VPS45Q9NRW7 570 aa8.18□□□□□ -1.1
LINC00954-202ENST00000449086 PADI4Q9UM07 663 aa8.18□□□□□ -1.1
LINC00954-202ENST00000449086 SLC8A2Q9UPR5 921 aa8.18□□□□□ -1.1
LINC00954-202ENST00000449086 COLQQ9Y215 455 aaPredicted RBP8.18□□□□□ -1.1
LINC00954-202ENST00000449086 CDYLQ9Y232 598 aa8.18□□□□□ -1.1
LINC00954-202ENST00000449086 GBF1Q92538 1859 aa8.17□□□□□ -1.1
LINC00954-202ENST00000449086 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.17□□□□□ -1.1
LINC00954-202ENST00000449086 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.17□□□□□ -1.1
LINC00954-202ENST00000449086 TMEM233B4DJY2 109 aa8.17□□□□□ -1.1
LINC00954-202ENST00000449086 E7ENX8 843 aa8.17□□□□□ -1.1
LINC00954-202ENST00000449086 H3BMQ9 156 aa8.17□□□□□ -1.1
LINC00954-202ENST00000449086 PIRO00625 290 aa8.17□□□□□ -1.1
LINC00954-202ENST00000449086 HDAC3O15379 428 aa8.17□□□□□ -1.1
LINC00954-202ENST00000449086 OXSR1O95747 527 aaPredicted RBP8.17□□□□□ -1.1
LINC00954-202ENST00000449086 POMCP01189 267 aa8.17□□□□□ -1.1
LINC00954-202ENST00000449086 ALDH2P05091 517 aa8.17□□□□□ -1.1
LINC00954-202ENST00000449086 NFICP08651 508 aa8.17□□□□□ -1.1
LINC00954-202ENST00000449086 GRIA3P42263 894 aa8.17□□□□□ -1.1
LINC00954-202ENST00000449086 ZNF132P52740 706 aa8.17□□□□□ -1.1
LINC00954-202ENST00000449086 PSME3P61289 254 aa8.17□□□□□ -1.1
LINC00954-202ENST00000449086 RBP5P82980 135 aa8.17□□□□□ -1.1
LINC00954-202ENST00000449086 PMS2P3Q13401 168 aa8.17□□□□□ -1.1
LINC00954-202ENST00000449086 CA9Q16790 459 aa8.17□□□□□ -1.1
LINC00954-202ENST00000449086 UPP1Q16831 310 aa8.17□□□□□ -1.1
LINC00954-202ENST00000449086 USP41Q3LFD5 358 aa8.17□□□□□ -1.1
LINC00954-202ENST00000449086 ZBED5Q49AG3 693 aa8.17□□□□□ -1.1
LINC00954-202ENST00000449086 ARL13AQ5H913 290 aaPredicted RBP8.17□□□□□ -1.1
LINC00954-202ENST00000449086 ZNF362Q5T0B9 420 aaPredicted RBP8.17□□□□□ -1.1
LINC00954-202ENST00000449086 IL31Q6EBC2 164 aa8.17□□□□□ -1.1
LINC00954-202ENST00000449086 GALNT18Q6P9A2 607 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms