RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-210ENST00000449058 UTP6Q9NYH9 597 aaKnown RBP17.03■□□□□ 0.32
TOM1-210ENST00000449058 ENO4A6NNW6 628 aa17.03■□□□□ 0.32
TOM1-210ENST00000449058 CFLARO15519 480 aa17.03■□□□□ 0.32
TOM1-210ENST00000449058 BCAS2O75934 225 aaPredicted RBP17.03■□□□□ 0.32
TOM1-210ENST00000449058 CNTN5O94779 1100 aa17.03■□□□□ 0.32
TOM1-210ENST00000449058 GALNT1Q10472 559 aaPredicted RBP17.03■□□□□ 0.32
TOM1-210ENST00000449058 GPR162Q16538 588 aa17.03■□□□□ 0.32
TOM1-210ENST00000449058 MFSD14CQ5VZR4 134 aa17.03■□□□□ 0.32
TOM1-210ENST00000449058 DCP1BQ8IZD4 617 aaKnown RBP17.03■□□□□ 0.32
TOM1-210ENST00000449058 ANKRD49Q8WVL7 239 aa17.03■□□□□ 0.32
TOM1-210ENST00000449058 FUBP3Q96I24 572 aaKnown RBP eCLIP17.03■□□□□ 0.32
TOM1-210ENST00000449058 GBP5Q96PP8 586 aa17.03■□□□□ 0.32
TOM1-210ENST00000449058 MFSD1Q9H3U5 465 aa17.03■□□□□ 0.32
TOM1-210ENST00000449058 FBXO44Q9H4M3 255 aa17.03■□□□□ 0.32
TOM1-210ENST00000449058 EML4Q9HC35 981 aaKnown RBP17.03■□□□□ 0.32
TOM1-210ENST00000449058 CYP4F12Q9HCS2 524 aa17.03■□□□□ 0.32
TOM1-210ENST00000449058 MRGBPQ9NV56 204 aa17.03■□□□□ 0.32
TOM1-210ENST00000449058 TBC1D30Q9Y2I9 924 aa17.03■□□□□ 0.32
TOM1-210ENST00000449058 DTNAQ9Y4J8 743 aa17.03■□□□□ 0.32
TOM1-210ENST00000449058 ACOT8O14734 319 aa17.02■□□□□ 0.32
TOM1-210ENST00000449058 SEPT4O43236 478 aa17.02■□□□□ 0.32
TOM1-210ENST00000449058 GPR15P49685 360 aa17.02■□□□□ 0.32
TOM1-210ENST00000449058 DSC1Q08554 894 aa17.02■□□□□ 0.32
TOM1-210ENST00000449058 ITKQ08881 620 aa17.02■□□□□ 0.32
TOM1-210ENST00000449058 DDR2Q16832 855 aa17.02■□□□□ 0.32
TOM1-210ENST00000449058 TRIM71Q2Q1W2 868 aaKnown RBP17.02■□□□□ 0.32
TOM1-210ENST00000449058 GRAMD1BQ3KR37 738 aa17.02■□□□□ 0.32
TOM1-210ENST00000449058 MMEL1Q495T6 779 aa17.02■□□□□ 0.32
TOM1-210ENST00000449058 ZNF280BQ86YH2 543 aa17.02■□□□□ 0.32
TOM1-210ENST00000449058 RNF135Q8IUD6 432 aa17.02■□□□□ 0.32
TOM1-210ENST00000449058 ARHGAP18Q8N392 663 aa17.02■□□□□ 0.32
TOM1-210ENST00000449058 ICA1LQ8NDH6 482 aa17.02■□□□□ 0.32
TOM1-210ENST00000449058 HMGCLL1Q8TB92 370 aa17.02■□□□□ 0.32
TOM1-210ENST00000449058 ARRDC2Q8TBH0 407 aa17.02■□□□□ 0.32
TOM1-210ENST00000449058 ZNF483Q8TF39 744 aaPredicted RBP17.02■□□□□ 0.32
TOM1-210ENST00000449058 USP13Q92995 863 aaPredicted RBP17.02■□□□□ 0.32
TOM1-210ENST00000449058 NPAS2Q99743 824 aa17.02■□□□□ 0.32
TOM1-210ENST00000449058 ZFYVE28Q9HCC9 887 aa17.02■□□□□ 0.32
TOM1-210ENST00000449058 RIMS3Q9UJD0 308 aa17.02■□□□□ 0.32
TOM1-210ENST00000449058 VWA7Q9Y334 891 aa17.02■□□□□ 0.32
TOM1-210ENST00000449058 STX16-NPEPL1H3BU86 382 aa17.02■□□□□ 0.31
TOM1-210ENST00000449058 S1PR4O95977 384 aa17.02■□□□□ 0.31
TOM1-210ENST00000449058 SLC26A3P40879 764 aa17.02■□□□□ 0.31
TOM1-210ENST00000449058 ARSDP51689 593 aa17.02■□□□□ 0.31
TOM1-210ENST00000449058 INHBCP55103 352 aa17.02■□□□□ 0.31
TOM1-210ENST00000449058 USP46P62068 366 aa17.02■□□□□ 0.31
TOM1-210ENST00000449058 MRPS22P82650 360 aaKnown RBP17.02■□□□□ 0.31
TOM1-210ENST00000449058 ADGRE1Q14246 886 aa17.02■□□□□ 0.31
TOM1-210ENST00000449058 SIRPB2Q5JXA9 342 aa17.02■□□□□ 0.31
TOM1-210ENST00000449058 CUZD1Q86UP6 607 aa17.02■□□□□ 0.31
TOM1-210ENST00000449058 SLC22A9Q8IVM8 553 aa17.02■□□□□ 0.31
TOM1-210ENST00000449058 AFAP1L2Q8N4X5 818 aa17.02■□□□□ 0.31
TOM1-210ENST00000449058 DLG3Q92796 817 aa17.02■□□□□ 0.31
TOM1-210ENST00000449058 PSMG2Q969U7 264 aa17.02■□□□□ 0.31
TOM1-210ENST00000449058 PABPC5Q96DU9 382 aaKnown RBP17.02■□□□□ 0.31
TOM1-210ENST00000449058 SP110Q9HB58 689 aa17.02■□□□□ 0.31
TOM1-210ENST00000449058 IL37Q9NZH6 218 aa17.02■□□□□ 0.31
TOM1-210ENST00000449058 GMIPQ9P107 970 aa17.02■□□□□ 0.31
TOM1-210ENST00000449058 LOC285095A0A1B0GVY8 99 aa17.01■□□□□ 0.31
TOM1-210ENST00000449058 CAPN8A6NHC0 703 aa17.01■□□□□ 0.31
TOM1-210ENST00000449058 TMEM189-UBE2V1I3L0A0 370 aa17.01■□□□□ 0.31
TOM1-210ENST00000449058 MSX2P35548 267 aaPredicted RBP17.01■□□□□ 0.31
TOM1-210ENST00000449058 PSMD8P48556 350 aa17.01■□□□□ 0.31
TOM1-210ENST00000449058 C1QTNF8P60827 252 aa17.01■□□□□ 0.31
TOM1-210ENST00000449058 KCNA10Q16322 511 aa17.01■□□□□ 0.31
TOM1-210ENST00000449058 NFE2Q16621 373 aaPredicted RBP17.01■□□□□ 0.31
TOM1-210ENST00000449058 FBXL19Q6PCT2 694 aa17.01■□□□□ 0.31
TOM1-210ENST00000449058 TMEM207Q6UWW9 146 aa17.01■□□□□ 0.31
TOM1-210ENST00000449058 GK5Q6ZS86 529 aa17.01■□□□□ 0.31
TOM1-210ENST00000449058 PTAR1Q7Z6K3 402 aaPredicted RBP17.01■□□□□ 0.31
TOM1-210ENST00000449058 PGBD5Q8N414 524 aa17.01■□□□□ 0.31
TOM1-210ENST00000449058 PNPLA1Q8N8W4 532 aa17.01■□□□□ 0.31
TOM1-210ENST00000449058 BHLHE22Q8NFJ8 381 aaPredicted RBP17.01■□□□□ 0.31
TOM1-210ENST00000449058 DCUN1D1Q96GG9 259 aa17.01■□□□□ 0.31
TOM1-210ENST00000449058 GSTO2Q9H4Y5 243 aa17.01■□□□□ 0.31
TOM1-210ENST00000449058 PENKP01210 267 aaPredicted RBP17.01■□□□□ 0.31
TOM1-210ENST00000449058 ATXN1LP0C7T5 689 aaKnown RBP17.01■□□□□ 0.31
TOM1-210ENST00000449058 CDKN2DP55273 166 aa17.01■□□□□ 0.31
TOM1-210ENST00000449058 FOLH1Q04609 750 aa17.01■□□□□ 0.31
TOM1-210ENST00000449058 CRHR2Q13324 411 aa17.01■□□□□ 0.31
TOM1-210ENST00000449058 SQLEQ14534 574 aa17.01■□□□□ 0.31
TOM1-210ENST00000449058 NAIF1Q69YI7 327 aaPredicted RBP17.01■□□□□ 0.31
TOM1-210ENST00000449058 TICAM1Q8IUC6 712 aa17.01■□□□□ 0.31
TOM1-210ENST00000449058 ST13P4Q8IZP2 240 aaPredicted RBP17.01■□□□□ 0.31
TOM1-210ENST00000449058 RNF148Q8N7C7 305 aa17.01■□□□□ 0.31
TOM1-210ENST00000449058 ATP6V0D2Q8N8Y2 350 aa17.01■□□□□ 0.31
TOM1-210ENST00000449058 IGSF8Q969P0 613 aa17.01■□□□□ 0.31
TOM1-210ENST00000449058 HDAC10Q969S8 669 aa17.01■□□□□ 0.31
TOM1-210ENST00000449058 MARCH4Q9P2E8 410 aaPredicted RBP17.01■□□□□ 0.31
TOM1-210ENST00000449058 PRSS51A0A1B0GVH4 220 aa17■□□□□ 0.31
TOM1-210ENST00000449058 LDB2O43679 373 aa17■□□□□ 0.31
TOM1-210ENST00000449058 AP1G1O43747 822 aa17■□□□□ 0.31
TOM1-210ENST00000449058 CAPNS1P04632 268 aa17■□□□□ 0.31
TOM1-210ENST00000449058 IMPDH1P20839 514 aa17■□□□□ 0.31
TOM1-210ENST00000449058 GRK4P32298 578 aa17■□□□□ 0.31
TOM1-210ENST00000449058 ACVR1Q04771 509 aa17■□□□□ 0.31
TOM1-210ENST00000449058 CACNB2Q08289 660 aaPredicted RBP17■□□□□ 0.31
TOM1-210ENST00000449058 PTK2BQ14289 1009 aa17■□□□□ 0.31
TOM1-210ENST00000449058 PDK3Q15120 406 aa17■□□□□ 0.31
TOM1-210ENST00000449058 CCSAPQ6IQ19 270 aaPredicted RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms