RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 CASP5P51878 434 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 HDAC4P56524 1084 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 SELENOVP59797 346 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 NAA25Q14CX7 972 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 DCAF12L1Q5VU92 463 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 DENND1BQ6P3S1 775 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 ZFRQ96KR1 1074 aaKnown RBP5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 KLHL32Q96NJ5 620 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 SECISBP2Q96T21 854 aaKnown RBP5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 B3GNT5Q9BYG0 378 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 RAB6BQ9NRW1 208 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 SEMA4GQ9NTN9 838 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 ZFATQ9P243 1243 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 PAK5Q9P286 719 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 PTGFRNQ9P2B2 879 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 DNMT3BQ9UBC3 853 aaKnown RBP5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 FAM153AQ9UHL3 310 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 CDC23Q9UJX2 597 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 SCML2Q9UQR0 700 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 UBR2Q8IWV8 1755 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 FAM149AA5PLN7 773 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 FOXP2O15409 715 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 GALR2O43603 387 aaPredicted RBP5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 PLA2G5P39877 138 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 SOX9P48436 509 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 AIF1P55008 147 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 DAOAP59103 153 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 CYP4F3Q08477 520 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 TUBB2AQ13885 445 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 SF3B4Q15427 424 aaKnown RBP eCLIP5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 HHATQ5VTY9 493 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 OTOAQ7RTW8 1153 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 GLT6D1Q7Z4J2 308 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 TBC1D1Q86TI0 1168 aaPredicted RBP5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 TRIM59Q8IWR1 403 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 BBS7Q8IWZ6 715 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 ELMO3Q96BJ8 720 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 VAT1Q99536 393 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 SEMA3CQ99985 751 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 FAM83CQ9BQN1 747 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 DESI2Q9BSY9 194 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 TUBB2BQ9BVA1 445 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 HES7Q9BYE0 225 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 SGK2Q9HBY8 427 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 MRPS33Q9Y291 106 aaKnown RBP5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 LAMB4A4D0S4 1761 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 O00370 1275 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 BUB1BO60566 1050 aaPredicted RBP5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 SRP72O76094 671 aaKnown RBP5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 HEXAP06865 529 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 HOXA11P31270 313 aaPredicted RBP5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 IGFALSP35858 605 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 AVPR1BP47901 424 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 PGDP52209 483 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 ACAP1Q15027 740 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 KCNT1Q5JUK3 1230 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 ZDHHC20Q5W0Z9 365 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 DUS1LQ6P1R4 473 aaKnown RBP5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 GATAD2AQ86YP4 633 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 SLC44A3Q8N4M1 653 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 ELSPBP1Q96BH3 223 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 TRIM4Q9C037 500 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 DPH5Q9H2P9 285 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 PNPLA8Q9NP80 782 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 IL36AQ9UHA7 158 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 KCND3Q9UK17 655 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 SHOC2Q9UQ13 582 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 ERBB2P04626 1255 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 GPR15P49685 360 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 RPS24P62847 133 aaKnown RBP5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 PDE1CQ14123 709 aaPredicted RBP5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 TRIP10Q15642 601 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 CBWD3Q5JTY5 395 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 CBWD5Q5RIA9 395 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 HECTD2Q5U5R9 776 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 ARHGAP17Q68EM7 881 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 CRYBG2Q8N1P7 616 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 GBP7Q8N8V2 638 aaPredicted RBP5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 MIPOL1Q8TD10 442 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 MYO19Q96H55 970 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 NEUROG2Q9H2A3 272 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 MDC1Q14676 2089 aaKnown RBP5.66□□□□□ -1.5
CDC42BPA-209ENST00000448940 ZNF840PA6NDX5 716 aa5.66□□□□□ -1.5
CDC42BPA-209ENST00000448940 CAPN14A8MX76 684 aa5.66□□□□□ -1.5
CDC42BPA-209ENST00000448940 ANP32DO95626 131 aa5.66□□□□□ -1.5
CDC42BPA-209ENST00000448940 GFAPP14136 432 aa5.66□□□□□ -1.5
CDC42BPA-209ENST00000448940 PRLRP16471 622 aa5.66□□□□□ -1.5
CDC42BPA-209ENST00000448940 CD38P28907 300 aa5.66□□□□□ -1.5
CDC42BPA-209ENST00000448940 TLX1P31314 330 aaPredicted RBP5.66□□□□□ -1.5
CDC42BPA-209ENST00000448940 GJA4P35212 333 aa5.66□□□□□ -1.5
CDC42BPA-209ENST00000448940 HTRA4P83105 476 aaPredicted RBP5.66□□□□□ -1.5
CDC42BPA-209ENST00000448940 AUHQ13825 339 aaKnown RBP5.66□□□□□ -1.5
CDC42BPA-209ENST00000448940 DSC3Q14574 896 aa5.66□□□□□ -1.5
CDC42BPA-209ENST00000448940 WDR59Q6PJI9 974 aa5.66□□□□□ -1.5
CDC42BPA-209ENST00000448940 PARM1Q6UWI2 310 aa5.66□□□□□ -1.5
CDC42BPA-209ENST00000448940 DHRS13Q6UX07 377 aa5.66□□□□□ -1.5
CDC42BPA-209ENST00000448940 RBM44Q6ZP01 1051 aaKnown RBP5.66□□□□□ -1.5
CDC42BPA-209ENST00000448940 PLXDC1Q8IUK5 500 aa5.66□□□□□ -1.5
CDC42BPA-209ENST00000448940 MYO1HQ8N1T3 1032 aa5.66□□□□□ -1.5
CDC42BPA-209ENST00000448940 C3orf20Q8ND61 904 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms