RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.9□□□□□ -0.022e-6■■■■□ 21.6
SF1-211ENST00000448404 LZTR1Q8N653 840 aa14.9□□□□□ -0.02
SF1-211ENST00000448404 CAPNS2Q96L46 248 aa14.9□□□□□ -0.02
SF1-211ENST00000448404 C8orf48Q96LL4 319 aa14.9□□□□□ -0.02
SF1-211ENST00000448404 FBXO44Q9H4M3 255 aa14.9□□□□□ -0.02
SF1-211ENST00000448404 ZFP37Q9Y6Q3 630 aaPredicted RBP14.9□□□□□ -0.02
SF1-211ENST00000448404 GREB1Q4ZG55 1949 aa14.89□□□□□ -0.03
SF1-211ENST00000448404 CASP8AP2Q9UKL3 1982 aa14.89□□□□□ -0.03
SF1-211ENST00000448404 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.89□□□□□ -0.03
SF1-211ENST00000448404 RPL14P50914 215 aaKnown RBP14.89□□□□□ -0.03
SF1-211ENST00000448404 SCNN1BP51168 640 aa14.89□□□□□ -0.03
SF1-211ENST00000448404 RENBPP51606 427 aa14.89□□□□□ -0.03
SF1-211ENST00000448404 PRAMEP78395 509 aa14.89□□□□□ -0.03
SF1-211ENST00000448404 SLC34A1Q06495 639 aa14.89□□□□□ -0.03
SF1-211ENST00000448404 HNRNPDQ14103 355 aaKnown RBP14.89□□□□□ -0.03
SF1-211ENST00000448404 SEL1L3Q68CR1 1132 aa14.89□□□□□ -0.03
SF1-211ENST00000448404 POTEHQ6S545 545 aa14.89□□□□□ -0.03
SF1-211ENST00000448404 SCML4Q8N228 414 aa14.89□□□□□ -0.03
SF1-211ENST00000448404 TUBB6Q9BUF5 446 aa14.89□□□□□ -0.03
SF1-211ENST00000448404 BPIFA1Q9NP55 256 aa14.89□□□□□ -0.03
SF1-211ENST00000448404 TMEM248Q9NWD8 314 aa14.89□□□□□ -0.03
SF1-211ENST00000448404 LRFN2Q9ULH4 789 aa14.89□□□□□ -0.03
SF1-211ENST00000448404 PCDHGC4Q9Y5F7 938 aa14.89□□□□□ -0.03
SF1-211ENST00000448404 SPO11Q9Y5K1 396 aa14.89□□□□□ -0.03
SF1-211ENST00000448404 EYSQ5T1H1 3165 aa14.89□□□□□ -0.03
SF1-211ENST00000448404 DPPA5A6NC42 116 aa14.89□□□□□ -0.03
SF1-211ENST00000448404 GALTP07902 379 aa14.89□□□□□ -0.03
SF1-211ENST00000448404 SP100P23497 879 aaPredicted RBP14.89□□□□□ -0.03
SF1-211ENST00000448404 DNAJB2P25686 324 aa14.89□□□□□ -0.03
SF1-211ENST00000448404 C1QTNF8P60827 252 aa14.89□□□□□ -0.03
SF1-211ENST00000448404 LBRQ14739 615 aaKnown RBP14.89□□□□□ -0.03
SF1-211ENST00000448404 HECTD2Q5U5R9 776 aa14.89□□□□□ -0.03
SF1-211ENST00000448404 ARMC3Q5W041 872 aa14.89□□□□□ -0.03
SF1-211ENST00000448404 FAM91A1Q658Y4 838 aa14.89□□□□□ -0.03
SF1-211ENST00000448404 TIGD7Q6NT04 549 aaPredicted RBP14.89□□□□□ -0.03
SF1-211ENST00000448404 OR6K2Q8NGY2 324 aa14.89□□□□□ -0.03
SF1-211ENST00000448404 ESAMQ96AP7 390 aa14.89□□□□□ -0.03
SF1-211ENST00000448404 RCN3Q96D15 328 aa14.89□□□□□ -0.03
SF1-211ENST00000448404 ZNF333Q96JL9 665 aa14.89□□□□□ -0.03
SF1-211ENST00000448404 BTN2A3PQ96KV6 586 aa14.89□□□□□ -0.03
SF1-211ENST00000448404 NPAS2Q99743 824 aa14.89□□□□□ -0.03
SF1-211ENST00000448404 DRC3Q9H069 523 aa14.89□□□□□ -0.03
SF1-211ENST00000448404 FBRSL1Q9HCM7 1045 aaKnown RBP14.89□□□□□ -0.03
SF1-211ENST00000448404 TMEM161AQ9NX61 479 aa14.89□□□□□ -0.03
SF1-211ENST00000448404 DOCK4Q8N1I0 1966 aa14.88□□□□□ -0.03
SF1-211ENST00000448404 SCN5AQ14524 2016 aa14.88□□□□□ -0.03
SF1-211ENST00000448404 A0A1B0GTL3 188 aa14.88□□□□□ -0.03
SF1-211ENST00000448404 C2orf78A6NCI8 922 aa14.88□□□□□ -0.03
SF1-211ENST00000448404 LDB2O43679 373 aa14.88□□□□□ -0.03
SF1-211ENST00000448404 HNRNPCL1O60812 293 aaKnown RBP14.88□□□□□ -0.03
SF1-211ENST00000448404 SMIM24O75264 130 aa14.88□□□□□ -0.03
SF1-211ENST00000448404 KLHL2O95198 593 aa14.88□□□□□ -0.03
SF1-211ENST00000448404 SEC24AO95486 1093 aa14.88□□□□□ -0.03
SF1-211ENST00000448404 SKIP12755 728 aa14.88□□□□□ -0.03
SF1-211ENST00000448404 ANPEPP15144 967 aa14.88□□□□□ -0.03
SF1-211ENST00000448404 PIK3R1P27986 724 aa14.88□□□□□ -0.03
SF1-211ENST00000448404 CDK7P50613 346 aa14.88□□□□□ -0.03
SF1-211ENST00000448404 RAP1GDS1P52306 607 aa14.88□□□□□ -0.03
SF1-211ENST00000448404 TBL3Q12788 808 aaKnown RBP14.88□□□□□ -0.03
SF1-211ENST00000448404 CCNIQ14094 377 aa14.88□□□□□ -0.03
SF1-211ENST00000448404 ZNF549Q6P9A3 640 aa14.88□□□□□ -0.03
SF1-211ENST00000448404 SLC30A9Q6PML9 568 aa14.88□□□□□ -0.03
SF1-211ENST00000448404 VN1R3Q9BXE9 311 aa14.88□□□□□ -0.03
SF1-211ENST00000448404 GMPR2Q9P2T1 348 aaKnown RBP14.88□□□□□ -0.03
SF1-211ENST00000448404 CDH22Q9UJ99 828 aa14.88□□□□□ -0.03
SF1-211ENST00000448404 FAM50BQ9Y247 325 aa14.88□□□□□ -0.03
SF1-211ENST00000448404 CCDC162PA2VCL2 907 aa14.88□□□□□ -0.03
SF1-211ENST00000448404 A6NHS1 94 aa14.88□□□□□ -0.03
SF1-211ENST00000448404 CIB2O75838 187 aa14.88□□□□□ -0.03
SF1-211ENST00000448404 GOT2P00505 430 aaKnown RBP14.88□□□□□ -0.03
SF1-211ENST00000448404 ENO3P13929 434 aaPredicted RBP14.88□□□□□ -0.03
SF1-211ENST00000448404 TACR2P21452 398 aa14.88□□□□□ -0.03
SF1-211ENST00000448404 DPP6P42658 865 aa14.88□□□□□ -0.03
SF1-211ENST00000448404 ACTR3P61158 418 aa14.88□□□□□ -0.03
SF1-211ENST00000448404 NKX3-2P78367 333 aa14.88□□□□□ -0.03
SF1-211ENST00000448404 SEMG2Q02383 582 aa14.88□□□□□ -0.03
SF1-211ENST00000448404 SERINC3Q13530 473 aa14.88□□□□□ -0.03
SF1-211ENST00000448404 TRIP4Q15650 581 aaPredicted RBP14.88□□□□□ -0.03
SF1-211ENST00000448404 GK5Q6ZS86 529 aa14.88□□□□□ -0.03
SF1-211ENST00000448404 CILP2Q8IUL8 1156 aa14.88□□□□□ -0.03
SF1-211ENST00000448404 CNTN4Q8IWV2 1026 aa14.88□□□□□ -0.03
SF1-211ENST00000448404 DCBLD1Q8N8Z6 715 aa14.88□□□□□ -0.03
SF1-211ENST00000448404 KDM1BQ8NB78 822 aa14.88□□□□□ -0.03
SF1-211ENST00000448404 OR9I1Q8NGQ6 314 aa14.88□□□□□ -0.03
SF1-211ENST00000448404 PTERQ96BW5 349 aa14.88□□□□□ -0.03
SF1-211ENST00000448404 CCDC97Q96F63 343 aaPredicted RBP14.88□□□□□ -0.03
SF1-211ENST00000448404 RNF38Q9H0F5 515 aa14.88□□□□□ -0.03
SF1-211ENST00000448404 TLR8Q9NR97 1041 aaKnown RBP14.88□□□□□ -0.03
SF1-211ENST00000448404 IRAK4Q9NWZ3 460 aa14.88□□□□□ -0.03
SF1-211ENST00000448404 GALPQ9UBC7 116 aa14.88□□□□□ -0.03
SF1-211ENST00000448404 A8MT66 165 aa14.87□□□□□ -0.03
SF1-211ENST00000448404 CBX4O00257 560 aa14.87□□□□□ -0.03
SF1-211ENST00000448404 UBFD1O14562 309 aaKnown RBP14.87□□□□□ -0.03
SF1-211ENST00000448404 HDAC3O15379 428 aa14.87□□□□□ -0.03
SF1-211ENST00000448404 MAGEC1O60732 1142 aa14.87□□□□□ -0.03
SF1-211ENST00000448404 ALOX15P16050 662 aaPredicted RBP14.87□□□□□ -0.03
SF1-211ENST00000448404 SELPP16109 830 aa14.87□□□□□ -0.03
SF1-211ENST00000448404 ZNF235Q14590 738 aa14.87□□□□□ -0.03
SF1-211ENST00000448404 KIAA0930Q6ICG6 404 aaPredicted RBP14.87□□□□□ -0.03
SF1-211ENST00000448404 MSANTD2Q6P1R3 559 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms