RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 MTX3Q5HYI7 312 aa7.82□□□□□ -1.16
NEDD9-204ENST00000448183 HLA-DQA1Q5Y7H0 255 aa7.82□□□□□ -1.16
NEDD9-204ENST00000448183 FITM2Q8N6M3 262 aa7.82□□□□□ -1.16
NEDD9-204ENST00000448183 LEMD2Q8NC56 503 aa7.82□□□□□ -1.16
NEDD9-204ENST00000448183 OR52K2Q8NGK3 314 aa7.82□□□□□ -1.16
NEDD9-204ENST00000448183 C2orf49Q9BVC5 232 aaPredicted RBP7.82□□□□□ -1.16
NEDD9-204ENST00000448183 EFR3BQ9Y2G0 817 aa7.82□□□□□ -1.16
NEDD9-204ENST00000448183 TRAF6Q9Y4K3 522 aa7.82□□□□□ -1.16
NEDD9-204ENST00000448183 SQORQ9Y6N5 450 aa7.82□□□□□ -1.16
NEDD9-204ENST00000448183 ERBB2P04626 1255 aa7.82□□□□□ -1.16
NEDD9-204ENST00000448183 LYNP07948 512 aa7.82□□□□□ -1.16
NEDD9-204ENST00000448183 PRKAR1AP10644 381 aa7.82□□□□□ -1.16
NEDD9-204ENST00000448183 CRHR1P34998 444 aa7.82□□□□□ -1.16
NEDD9-204ENST00000448183 ACLYP53396 1101 aa7.82□□□□□ -1.16
NEDD9-204ENST00000448183 PRKAG1P54619 331 aa7.82□□□□□ -1.16
NEDD9-204ENST00000448183 UGT2B15P54855 530 aa7.82□□□□□ -1.16
NEDD9-204ENST00000448183 RAB25P57735 213 aa7.82□□□□□ -1.16
NEDD9-204ENST00000448183 ACVR2BQ13705 512 aa7.82□□□□□ -1.16
NEDD9-204ENST00000448183 IL17AQ16552 155 aa7.82□□□□□ -1.16
NEDD9-204ENST00000448183 SLC39A12Q504Y0 691 aa7.82□□□□□ -1.16
NEDD9-204ENST00000448183 METTL21CQ5VZV1 264 aa7.82□□□□□ -1.16
NEDD9-204ENST00000448183 SLCO6A1Q86UG4 719 aa7.82□□□□□ -1.16
NEDD9-204ENST00000448183 AKAP14Q86UN6 197 aa7.82□□□□□ -1.16
NEDD9-204ENST00000448183 IRF2BP1Q8IU81 584 aa7.82□□□□□ -1.16
NEDD9-204ENST00000448183 COX4I2Q96KJ9 171 aa7.82□□□□□ -1.16
NEDD9-204ENST00000448183 MAGEB10Q96LZ2 347 aaPredicted RBP7.82□□□□□ -1.16
NEDD9-204ENST00000448183 C7orf26Q96N11 449 aa7.82□□□□□ -1.16
NEDD9-204ENST00000448183 PANX1Q96RD7 426 aa7.82□□□□□ -1.16
NEDD9-204ENST00000448183 NPAS2Q99743 824 aa7.82□□□□□ -1.16
NEDD9-204ENST00000448183 TMEM109Q9BVC6 243 aa7.82□□□□□ -1.16
NEDD9-204ENST00000448183 SPON1Q9HCB6 807 aa7.82□□□□□ -1.16
NEDD9-204ENST00000448183 ERVK-5Q9HDB9 667 aa7.82□□□□□ -1.16
NEDD9-204ENST00000448183 TMEM138Q9NPI0 162 aa7.82□□□□□ -1.16
NEDD9-204ENST00000448183 ING3Q9NXR8 418 aa7.82□□□□□ -1.16
NEDD9-204ENST00000448183 A8MUI8 341 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 DCDC2CA8MYV0 355 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 TULP2O00295 520 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 KPNA5O15131 536 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 NDUFB5O43674 189 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 TIPRLO75663 272 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 SLC22A3O75751 556 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 TSPAN9O75954 239 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 C2P06681 752 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 PPIBP23284 216 aaKnown RBP7.81□□□□□ -1.16
NEDD9-204ENST00000448183 CXCR2P25025 360 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 COPZ1P61923 177 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 SKP1P63208 163 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 CWF19L1Q69YN2 538 aaKnown RBP7.81□□□□□ -1.16
NEDD9-204ENST00000448183 BHLHB9Q6PI77 547 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 VSIG10LQ86VR7 867 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 HPS6Q86YV9 775 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 TRAPPC5Q8IUR0 188 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 NKX2-3Q8TAU0 364 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 SEMA3CQ99985 751 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 NFKBIZQ9BYH8 718 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 ABHD16BQ9H3Z7 469 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 PIGUQ9H490 435 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 NOL11Q9H8H0 719 aaKnown RBP7.81□□□□□ -1.16
NEDD9-204ENST00000448183 TRMT13Q9NUP7 481 aaKnown RBP7.81□□□□□ -1.16
NEDD9-204ENST00000448183 GALNT8Q9NY28 637 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 ZNF222Q9UK12 451 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 RAB26Q9ULW5 256 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 GNEQ9Y223 722 aaKnown RBP7.81□□□□□ -1.16
NEDD9-204ENST00000448183 VWA7Q9Y334 891 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 PPP2R3BQ9Y5P8 575 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 SPATA31A5Q5VU36 1347 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 SPATA31A7Q8IWB4 1347 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 BTN3A3O00478 584 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 KPNA3O00505 521 aaPredicted RBP7.81□□□□□ -1.16
NEDD9-204ENST00000448183 RFXANKO14593 260 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 MEIS2O14770 477 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 TGFB1I1O43294 461 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 LRIG2O94898 1065 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 CELF2O95319 508 aaKnown RBP7.81□□□□□ -1.16
NEDD9-204ENST00000448183 NUDT14O95848 222 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 VEGFAP15692 232 aaPredicted RBP7.81□□□□□ -1.16
NEDD9-204ENST00000448183 SP100P23497 879 aaPredicted RBP7.81□□□□□ -1.16
NEDD9-204ENST00000448183 MAPK8P45983 427 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 CDH13P55290 713 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 CNTN2Q02246 1040 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 SGCGQ13326 291 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 MED22Q15528 200 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 SLC1A5Q15758 541 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 SETMARQ53H47 684 aaPredicted RBP7.81□□□□□ -1.16
NEDD9-204ENST00000448183 HYIQ5T013 277 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 FNBP1LQ5T0N5 605 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 WSCD1Q658N2 575 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 PAGE2Q7Z2X7 111 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 CUZD1Q86UP6 607 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 CAMKK1Q8N5S9 505 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 OR2T12Q8NG77 320 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 MKL1Q969V6 931 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 C18orf25Q96B23 403 aaPredicted RBP7.81□□□□□ -1.16
NEDD9-204ENST00000448183 ITCHQ96J02 903 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 S100A13Q99584 98 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 WDR55Q9H6Y2 383 aaPredicted RBP7.81□□□□□ -1.16
NEDD9-204ENST00000448183 PNPLA8Q9NP80 782 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 SLC9A8Q9Y2E8 581 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 SH3GLB1Q9Y371 365 aa7.81□□□□□ -1.16
NEDD9-204ENST00000448183 HMGB3O15347 200 aaKnown RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms