RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 LMO3Q8TAP4 145 aa13.19□□□□□ -0.3
DDX56-206ENST00000446987 RASSF5Q8WWW0 418 aa13.19□□□□□ -0.3
DDX56-206ENST00000446987 ATL1Q8WXF7 558 aa13.19□□□□□ -0.3
DDX56-206ENST00000446987 HLA-CQ95604 372 aa13.19□□□□□ -0.3
DDX56-206ENST00000446987 CRISPLD1Q9H336 500 aa13.19□□□□□ -0.3
DDX56-206ENST00000446987 PCDH9Q9HC56 1237 aa13.19□□□□□ -0.3
DDX56-206ENST00000446987 RNF103O00237 685 aa13.18□□□□□ -0.3
DDX56-206ENST00000446987 COPEO14579 308 aa13.18□□□□□ -0.3
DDX56-206ENST00000446987 XPO1O14980 1071 aaKnown RBP13.18□□□□□ -0.3
DDX56-206ENST00000446987 PMM2O15305 246 aa13.18□□□□□ -0.3
DDX56-206ENST00000446987 LIASO43766 372 aa13.18□□□□□ -0.3
DDX56-206ENST00000446987 NOL3O60936 208 aaKnown RBP13.18□□□□□ -0.3
DDX56-206ENST00000446987 ABLIM3O94929 683 aa13.18□□□□□ -0.3
DDX56-206ENST00000446987 GLUD1P00367 558 aa13.18□□□□□ -0.3
DDX56-206ENST00000446987 S100BP04271 92 aaPredicted RBP13.18□□□□□ -0.3
DDX56-206ENST00000446987 MSL3P1P0C860 447 aa13.18□□□□□ -0.3
DDX56-206ENST00000446987 ASPAP45381 313 aa13.18□□□□□ -0.3
DDX56-206ENST00000446987 ZNF846Q147U1 533 aa13.18□□□□□ -0.3
DDX56-206ENST00000446987 PDK1Q15118 436 aa13.18□□□□□ -0.3
DDX56-206ENST00000446987 FSCBQ5H9T9 825 aa13.18□□□□□ -0.3
DDX56-206ENST00000446987 C16orf89Q6UX73 402 aa13.18□□□□□ -0.3
DDX56-206ENST00000446987 PRR23CQ6ZRP0 262 aa13.18□□□□□ -0.3
DDX56-206ENST00000446987 LRRTM3Q86VH5 581 aa13.18□□□□□ -0.3
DDX56-206ENST00000446987 ADGRF2Q8IZF7 708 aa13.18□□□□□ -0.3
DDX56-206ENST00000446987 SMRP1Q8NCR6 262 aa13.18□□□□□ -0.3
DDX56-206ENST00000446987 EXD1Q8NHP7 514 aa13.18□□□□□ -0.3
DDX56-206ENST00000446987 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.18□□□□□ -0.3
DDX56-206ENST00000446987 SHKBP1Q8TBC3 707 aa13.18□□□□□ -0.3
DDX56-206ENST00000446987 CHAC2Q8WUX2 184 aa13.18□□□□□ -0.3
DDX56-206ENST00000446987 SLC44A1Q8WWI5 657 aa13.18□□□□□ -0.3
DDX56-206ENST00000446987 PCDHB18PQ96TA0 734 aa13.18□□□□□ -0.3
DDX56-206ENST00000446987 MRPL45Q9BRJ2 306 aaKnown RBP13.18□□□□□ -0.3
DDX56-206ENST00000446987 S1PR5Q9H228 398 aa13.18□□□□□ -0.3
DDX56-206ENST00000446987 CXorf21Q9HAI6 301 aa13.18□□□□□ -0.3
DDX56-206ENST00000446987 THG1LQ9NWX6 298 aaKnown RBP13.18□□□□□ -0.3
DDX56-206ENST00000446987 IPO11Q9UI26 975 aaKnown RBP13.18□□□□□ -0.3
DDX56-206ENST00000446987 FARP1Q9Y4F1 1045 aaPredicted RBP13.18□□□□□ -0.3
DDX56-206ENST00000446987 MYOCOSA0A1B0GUC4 107 aa13.17□□□□□ -0.3
DDX56-206ENST00000446987 DYTNA2CJ06 578 aa13.17□□□□□ -0.3
DDX56-206ENST00000446987 FAM172BPA6NC97 362 aa13.17□□□□□ -0.3
DDX56-206ENST00000446987 GRXCR2A6NFK2 248 aa13.17□□□□□ -0.3
DDX56-206ENST00000446987 H7C4K7 107 aa13.17□□□□□ -0.3
DDX56-206ENST00000446987 CLOCKO15516 846 aa13.17□□□□□ -0.3
DDX56-206ENST00000446987 SCO2O43819 266 aa13.17□□□□□ -0.3
DDX56-206ENST00000446987 C1RP00736 705 aa13.17□□□□□ -0.3
DDX56-206ENST00000446987 NTRK1P04629 796 aa13.17□□□□□ -0.3
DDX56-206ENST00000446987 MYCLP1P12525 358 aaPredicted RBP13.17□□□□□ -0.3
DDX56-206ENST00000446987 RAP1GAPP47736 663 aa13.17□□□□□ -0.3
DDX56-206ENST00000446987 CTBSQ01459 385 aa13.17□□□□□ -0.3
DDX56-206ENST00000446987 SCARA5Q6ZMJ2 495 aa13.17□□□□□ -0.3
DDX56-206ENST00000446987 RNF19BQ6ZMZ0 732 aa13.17□□□□□ -0.3
DDX56-206ENST00000446987 USP37Q86T82 979 aa13.17□□□□□ -0.3
DDX56-206ENST00000446987 SLC15A4Q8N697 577 aa13.17□□□□□ -0.3
DDX56-206ENST00000446987 TTC9BQ8N6N2 239 aa13.17□□□□□ -0.3
DDX56-206ENST00000446987 C12orf76Q8N812 135 aaPredicted RBP13.17□□□□□ -0.3
DDX56-206ENST00000446987 SUN5Q8TC36 379 aa13.17□□□□□ -0.3
DDX56-206ENST00000446987 HPS1Q92902 700 aa13.17□□□□□ -0.3
DDX56-206ENST00000446987 CCDC124Q96CT7 223 aaKnown RBP13.17□□□□□ -0.3
DDX56-206ENST00000446987 HERPUD2Q9BSE4 406 aa13.17□□□□□ -0.3
DDX56-206ENST00000446987 BCO2Q9BYV7 579 aa13.17□□□□□ -0.3
DDX56-206ENST00000446987 WDR12Q9GZL7 423 aaKnown RBP13.17□□□□□ -0.3
DDX56-206ENST00000446987 KLHL25Q9H0H3 589 aa13.17□□□□□ -0.3
DDX56-206ENST00000446987 CAAP1Q9H8G2 361 aa13.17□□□□□ -0.3
DDX56-206ENST00000446987 PNPLA8Q9NP80 782 aa13.17□□□□□ -0.3
DDX56-206ENST00000446987 CNGB3Q9NQW8 809 aa13.17□□□□□ -0.3
DDX56-206ENST00000446987 TMLHEQ9NVH6 421 aa13.17□□□□□ -0.3
DDX56-206ENST00000446987 HACD3Q9P035 362 aa13.17□□□□□ -0.3
DDX56-206ENST00000446987 DAPK2Q9UIK4 370 aa13.17□□□□□ -0.3
DDX56-206ENST00000446987 DSEQ9UL01 958 aa13.17□□□□□ -0.3
DDX56-206ENST00000446987 A0A0C4DFX4 3053 aa13.17□□□□□ -0.3
DDX56-206ENST00000446987 ILVBLA1L0T0 632 aa13.16□□□□□ -0.3
DDX56-206ENST00000446987 RFPL2O75678 378 aa13.16□□□□□ -0.3
DDX56-206ENST00000446987 CLPXO76031 633 aa13.16□□□□□ -0.3
DDX56-206ENST00000446987 SEC24AO95486 1093 aa13.16□□□□□ -0.3
DDX56-206ENST00000446987 ENO2P09104 434 aaPredicted RBP13.16□□□□□ -0.3
DDX56-206ENST00000446987 RALAP11233 206 aa13.16□□□□□ -0.3
DDX56-206ENST00000446987 WARSP23381 471 aaKnown RBP13.16□□□□□ -0.3
DDX56-206ENST00000446987 LMO2P25791 158 aa13.16□□□□□ -0.3
DDX56-206ENST00000446987 KCNQ1P51787 676 aa13.16□□□□□ -0.3
DDX56-206ENST00000446987 KPNA1P52294 538 aaPredicted RBP13.16□□□□□ -0.3
DDX56-206ENST00000446987 CDH8P55286 799 aa13.16□□□□□ -0.3
DDX56-206ENST00000446987 IFITM2Q01629 132 aa13.16□□□□□ -0.3
DDX56-206ENST00000446987 HSPA14Q0VDF9 509 aa13.16□□□□□ -0.3
DDX56-206ENST00000446987 CETN1Q12798 172 aa13.16□□□□□ -0.3
DDX56-206ENST00000446987 SELENBP1Q13228 472 aa13.16□□□□□ -0.3
DDX56-206ENST00000446987 ITGADQ13349 1161 aa13.16□□□□□ -0.3
DDX56-206ENST00000446987 LEXMQ3ZCV2 418 aa13.16□□□□□ -0.3
DDX56-206ENST00000446987 BOLA3Q53S33 107 aa13.16□□□□□ -0.3
DDX56-206ENST00000446987 TCHHL1Q5QJ38 904 aaPredicted RBP13.16□□□□□ -0.3
DDX56-206ENST00000446987 XKR5Q6UX68 686 aa13.16□□□□□ -0.3
DDX56-206ENST00000446987 DPH6Q7L8W6 267 aa13.16□□□□□ -0.3
DDX56-206ENST00000446987 IGFN1Q86VF2 1251 aa13.16□□□□□ -0.3
DDX56-206ENST00000446987 GRAMD2AQ8IUY3 354 aa13.16□□□□□ -0.3
DDX56-206ENST00000446987 RHOT1Q8IXI2 618 aa13.16□□□□□ -0.3
DDX56-206ENST00000446987 FAM71AQ8IYT1 594 aa13.16□□□□□ -0.3
DDX56-206ENST00000446987 TMEM86AQ8N2M4 240 aa13.16□□□□□ -0.3
DDX56-206ENST00000446987 GOLM1Q8NBJ4 401 aa13.16□□□□□ -0.3
DDX56-206ENST00000446987 FBXL13Q8NEE6 735 aa13.16□□□□□ -0.3
DDX56-206ENST00000446987 PIWIL2Q8TC59 973 aaKnown RBP13.16□□□□□ -0.3
DDX56-206ENST00000446987 SPATA18Q8TC71 538 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms