RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 SGCGQ13326 291 aa14.94□□□□□ -0.02
HDAC4-204ENST00000446876 PTPRRQ15256 657 aa14.94□□□□□ -0.02
HDAC4-204ENST00000446876 SHBQ15464 509 aa14.94□□□□□ -0.02
HDAC4-204ENST00000446876 TMEM52BQ4KMG9 183 aa14.94□□□□□ -0.02
HDAC4-204ENST00000446876 ERAP2Q6P179 960 aa14.94□□□□□ -0.02
HDAC4-204ENST00000446876 ERMP1Q7Z2K6 904 aa14.94□□□□□ -0.02
HDAC4-204ENST00000446876 PTAR1Q7Z6K3 402 aaPredicted RBP14.94□□□□□ -0.02
HDAC4-204ENST00000446876 NAXDQ8IW45 347 aa14.94□□□□□ -0.02
HDAC4-204ENST00000446876 LRRC57Q8N9N7 239 aa14.94□□□□□ -0.02
HDAC4-204ENST00000446876 HCAR2Q8TDS4 363 aa14.94□□□□□ -0.02
HDAC4-204ENST00000446876 SKA1Q96BD8 255 aa14.94□□□□□ -0.02
HDAC4-204ENST00000446876 KLHDC7BQ96G42 594 aa14.94□□□□□ -0.02
HDAC4-204ENST00000446876 BMFQ96LC9 184 aa14.94□□□□□ -0.02
HDAC4-204ENST00000446876 OLFM3Q96PB7 478 aa14.94□□□□□ -0.02
HDAC4-204ENST00000446876 HERPUD2Q9BSE4 406 aa14.94□□□□□ -0.02
HDAC4-204ENST00000446876 POLR1EQ9GZS1 481 aaKnown RBP14.94□□□□□ -0.02
HDAC4-204ENST00000446876 SEPT10Q9P0V9 454 aa14.94□□□□□ -0.02
HDAC4-204ENST00000446876 BTBD3Q9Y2F9 522 aa14.94□□□□□ -0.02
HDAC4-204ENST00000446876 PCNX2A6NKB5 2137 aa14.93□□□□□ -0.02
HDAC4-204ENST00000446876 A0A1B0GTQ1 180 aa14.93□□□□□ -0.02
HDAC4-204ENST00000446876 GOLGA8CPA6NN73 597 aa14.93□□□□□ -0.02
HDAC4-204ENST00000446876 HTRA2O43464 458 aaPredicted RBP14.93□□□□□ -0.02
HDAC4-204ENST00000446876 NEBLO76041 1014 aa14.93□□□□□ -0.02
HDAC4-204ENST00000446876 TM7SF2O76062 418 aa14.93□□□□□ -0.02
HDAC4-204ENST00000446876 ZRANB2O95218 330 aaKnown RBP eCLIP14.93□□□□□ -0.02
HDAC4-204ENST00000446876 CPP00450 1065 aa14.93□□□□□ -0.02
HDAC4-204ENST00000446876 JCHAINP01591 159 aa14.93□□□□□ -0.02
HDAC4-204ENST00000446876 ZNF883P0CG24 379 aa14.93□□□□□ -0.02
HDAC4-204ENST00000446876 C6P13671 934 aa14.93□□□□□ -0.02
HDAC4-204ENST00000446876 ZFXP17010 805 aaPredicted RBP14.93□□□□□ -0.02
HDAC4-204ENST00000446876 CSRP1P21291 193 aaKnown RBP14.93□□□□□ -0.02
HDAC4-204ENST00000446876 IGFALSP35858 605 aa14.93□□□□□ -0.02
HDAC4-204ENST00000446876 LIG3P49916 1009 aa14.93□□□□□ -0.02
HDAC4-204ENST00000446876 SUOXP51687 545 aa14.93□□□□□ -0.02
HDAC4-204ENST00000446876 NIPAL4Q0D2K0 466 aa14.93□□□□□ -0.02
HDAC4-204ENST00000446876 KIF5AQ12840 1032 aa14.93□□□□□ -0.02
HDAC4-204ENST00000446876 SLC14A1Q13336 389 aa14.93□□□□□ -0.02
HDAC4-204ENST00000446876 TFDP3Q5H9I0 405 aa14.93□□□□□ -0.02
HDAC4-204ENST00000446876 AADACL2Q6P093 401 aa14.93□□□□□ -0.02
HDAC4-204ENST00000446876 ABI3BPQ7Z7G0 1075 aa14.93□□□□□ -0.02
HDAC4-204ENST00000446876 IQCHQ86VS3 1027 aa14.93□□□□□ -0.02
HDAC4-204ENST00000446876 GATAD2AQ86YP4 633 aa14.93□□□□□ -0.02
HDAC4-204ENST00000446876 RCOR2Q8IZ40 523 aa14.93□□□□□ -0.02
HDAC4-204ENST00000446876 SLC22A18ASQ8N1D0 253 aa14.93□□□□□ -0.02
HDAC4-204ENST00000446876 EXD1Q8NHP7 514 aa14.93□□□□□ -0.02
HDAC4-204ENST00000446876 KIAA1524Q8TCG1 905 aa14.93□□□□□ -0.02
HDAC4-204ENST00000446876 SETD7Q8WTS6 366 aaKnown RBP14.93□□□□□ -0.02
HDAC4-204ENST00000446876 FATE1Q969F0 183 aa14.93□□□□□ -0.02
HDAC4-204ENST00000446876 SMIM14Q96QK8 99 aa14.93□□□□□ -0.02
HDAC4-204ENST00000446876 ELF4Q99607 663 aaPredicted RBP14.93□□□□□ -0.02
HDAC4-204ENST00000446876 HEMGNQ9BXL5 484 aa14.93□□□□□ -0.02
HDAC4-204ENST00000446876 GRPEL1Q9HAV7 217 aa14.93□□□□□ -0.02
HDAC4-204ENST00000446876 PACSIN2Q9UNF0 486 aaPredicted RBP14.93□□□□□ -0.02
HDAC4-204ENST00000446876 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.93□□□□□ -0.02
HDAC4-204ENST00000446876 PCDHB9Q9Y5E1 797 aa14.93□□□□□ -0.02
HDAC4-204ENST00000446876 ADGRG1Q9Y653 693 aa14.93□□□□□ -0.02
HDAC4-204ENST00000446876 SPAARA0A1B0GVQ0 90 aa14.92□□□□□ -0.02
HDAC4-204ENST00000446876 A6NNZ2 444 aa14.92□□□□□ -0.02
HDAC4-204ENST00000446876 SOCS5O75159 536 aa14.92□□□□□ -0.02
HDAC4-204ENST00000446876 FTCDO95954 541 aa14.92□□□□□ -0.02
HDAC4-204ENST00000446876 CTNNA2P26232 953 aa14.92□□□□□ -0.02
HDAC4-204ENST00000446876 IFI35P80217 286 aaPredicted RBP14.92□□□□□ -0.02
HDAC4-204ENST00000446876 TFDP2Q14188 446 aa14.92□□□□□ -0.02
HDAC4-204ENST00000446876 PDK1Q15118 436 aa14.92□□□□□ -0.02
HDAC4-204ENST00000446876 IRF4Q15306 451 aa14.92□□□□□ -0.02
HDAC4-204ENST00000446876 TPRG1LQ5T0D9 272 aa14.92□□□□□ -0.02
HDAC4-204ENST00000446876 N4BP2L1Q5TBK1 243 aaPredicted RBP14.92□□□□□ -0.02
HDAC4-204ENST00000446876 ALG1LQ6GMV1 187 aa14.92□□□□□ -0.02
HDAC4-204ENST00000446876 KYAT3Q6YP21 454 aaKnown RBP14.92□□□□□ -0.02
HDAC4-204ENST00000446876 Q6ZSR6 202 aa14.92□□□□□ -0.02
HDAC4-204ENST00000446876 DPPA4Q7L190 304 aa14.92□□□□□ -0.02
HDAC4-204ENST00000446876 NT5DC3Q86UY8 548 aa14.92□□□□□ -0.02
HDAC4-204ENST00000446876 ZSCAN30Q86W11 494 aa14.92□□□□□ -0.02
HDAC4-204ENST00000446876 CNTD1Q8N815 330 aa14.92□□□□□ -0.02
HDAC4-204ENST00000446876 TP53I13Q8NBR0 393 aaPredicted RBP14.92□□□□□ -0.02
HDAC4-204ENST00000446876 ARRDC2Q8TBH0 407 aa14.92□□□□□ -0.02
HDAC4-204ENST00000446876 ALG3Q92685 438 aa14.92□□□□□ -0.02
HDAC4-204ENST00000446876 RBM41Q96IZ5 413 aaKnown RBP14.92□□□□□ -0.02
HDAC4-204ENST00000446876 IL12RB2Q99665 862 aa14.92□□□□□ -0.02
HDAC4-204ENST00000446876 SLC32A1Q9H598 525 aa14.92□□□□□ -0.02
HDAC4-204ENST00000446876 MBNL1Q9NR56 388 aaKnown RBP14.92□□□□□ -0.02
HDAC4-204ENST00000446876 B4GALT6Q9UBX8 382 aa14.92□□□□□ -0.02
HDAC4-204ENST00000446876 PCDHA3Q9Y5H8 950 aa14.92□□□□□ -0.02
HDAC4-204ENST00000446876 RAI2Q9Y5P3 530 aa14.92□□□□□ -0.02
HDAC4-204ENST00000446876 CAPN6Q9Y6Q1 641 aa14.92□□□□□ -0.02
HDAC4-204ENST00000446876 A0A0U1RQS6 177 aa14.91□□□□□ -0.02
HDAC4-204ENST00000446876 FPGTO14772 594 aa14.91□□□□□ -0.02
HDAC4-204ENST00000446876 PPP1R12AO14974 1030 aaPredicted RBP14.91□□□□□ -0.02
HDAC4-204ENST00000446876 SDC3O75056 442 aa14.91□□□□□ -0.02
HDAC4-204ENST00000446876 PGLSO95336 258 aa14.91□□□□□ -0.02
HDAC4-204ENST00000446876 PDHA1P08559 390 aa14.91□□□□□ -0.02
HDAC4-204ENST00000446876 CEACAM1P13688 526 aa14.91□□□□□ -0.02
HDAC4-204ENST00000446876 CTPS1P17812 591 aa14.91□□□□□ -0.02
HDAC4-204ENST00000446876 TGM2P21980 687 aa14.91□□□□□ -0.02
HDAC4-204ENST00000446876 EPHA8P29322 1005 aaPredicted RBP14.91□□□□□ -0.02
HDAC4-204ENST00000446876 OVGP1Q12889 678 aa14.91□□□□□ -0.02
HDAC4-204ENST00000446876 BNIP3Q12983 259 aa14.91□□□□□ -0.02
HDAC4-204ENST00000446876 PPP2R5EQ16537 467 aa14.91□□□□□ -0.02
HDAC4-204ENST00000446876 ZNF542PQ5EBM4 170 aa14.91□□□□□ -0.02
HDAC4-204ENST00000446876 RALGPS1Q5JS13 557 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms