RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 SEL1LQ9UBV2 794 aa4.66□□□□□ -1.66
HMGB1P48-201ENST00000446155 FBXO40Q9UH90 709 aa4.66□□□□□ -1.66
HMGB1P48-201ENST00000446155 TTC3P53804 2025 aa4.66□□□□□ -1.66
HMGB1P48-201ENST00000446155 CKAP5Q14008 2032 aa4.65□□□□□ -1.66
HMGB1P48-201ENST00000446155 TEX13CA0A0J9YWL9 993 aa4.65□□□□□ -1.67
HMGB1P48-201ENST00000446155 C17orf113A0A1B0GUU1 675 aa4.65□□□□□ -1.67
HMGB1P48-201ENST00000446155 FAM237BA0A1B0GVD1 139 aa4.65□□□□□ -1.67
HMGB1P48-201ENST00000446155 FRMD3A2A2Y4 597 aa4.65□□□□□ -1.67
HMGB1P48-201ENST00000446155 OR6C68A6NDL8 312 aa4.65□□□□□ -1.67
HMGB1P48-201ENST00000446155 PPEF2O14830 753 aa4.65□□□□□ -1.67
HMGB1P48-201ENST00000446155 LDLRAD4O15165 306 aa4.65□□□□□ -1.67
HMGB1P48-201ENST00000446155 HNRNPCL1O60812 293 aaKnown RBP4.65□□□□□ -1.67
HMGB1P48-201ENST00000446155 IFNA2P01563 188 aa4.65□□□□□ -1.67
HMGB1P48-201ENST00000446155 QDPRP09417 244 aa4.65□□□□□ -1.67
HMGB1P48-201ENST00000446155 TBXAS1P24557 533 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P48-201ENST00000446155 SLC16A2P36021 539 aa4.65□□□□□ -1.67
HMGB1P48-201ENST00000446155 MSH2P43246 934 aa4.65□□□□□ -1.67
HMGB1P48-201ENST00000446155 PTPN9P43378 593 aa4.65□□□□□ -1.67
HMGB1P48-201ENST00000446155 ZNF81P51508 661 aa4.65□□□□□ -1.67
HMGB1P48-201ENST00000446155 RAD23AP54725 363 aa4.65□□□□□ -1.67
HMGB1P48-201ENST00000446155 OLR1P78380 273 aa4.65□□□□□ -1.67
HMGB1P48-201ENST00000446155 GOLGA8DPQ0D2H9 430 aa4.65□□□□□ -1.67
HMGB1P48-201ENST00000446155 AIMP2Q13155 320 aaKnown RBP4.65□□□□□ -1.67
HMGB1P48-201ENST00000446155 IRF3Q14653 427 aa4.65□□□□□ -1.67
HMGB1P48-201ENST00000446155 RABEP1Q15276 862 aa4.65□□□□□ -1.67
HMGB1P48-201ENST00000446155 INPP5JQ15735 1006 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P48-201ENST00000446155 ASIC2Q16515 512 aa4.65□□□□□ -1.67
HMGB1P48-201ENST00000446155 RAB41Q5JT25 222 aa4.65□□□□□ -1.67
HMGB1P48-201ENST00000446155 PXDC1Q5TGL8 231 aa4.65□□□□□ -1.67
HMGB1P48-201ENST00000446155 CDC73Q6P1J9 531 aa4.65□□□□□ -1.67
HMGB1P48-201ENST00000446155 DENND5BQ6ZUT9 1274 aa4.65□□□□□ -1.67
HMGB1P48-201ENST00000446155 RRM2BQ7LG56 351 aa4.65□□□□□ -1.67
HMGB1P48-201ENST00000446155 MRPL10Q7Z7H8 261 aaKnown RBP4.65□□□□□ -1.67
HMGB1P48-201ENST00000446155 CCDC25Q86WR0 208 aa4.65□□□□□ -1.67
HMGB1P48-201ENST00000446155 GPSM1Q86YR5 675 aa4.65□□□□□ -1.67
HMGB1P48-201ENST00000446155 CEP97Q8IW35 865 aa4.65□□□□□ -1.67
HMGB1P48-201ENST00000446155 OR8H3Q8N146 312 aa4.65□□□□□ -1.67
HMGB1P48-201ENST00000446155 NDUFAF2Q8N183 169 aa4.65□□□□□ -1.67
HMGB1P48-201ENST00000446155 SLC25A41Q8N5S1 370 aa4.65□□□□□ -1.67
HMGB1P48-201ENST00000446155 NRACQ8N912 160 aa4.65□□□□□ -1.67
HMGB1P48-201ENST00000446155 MSANTD4Q8NCY6 345 aa4.65□□□□□ -1.67
HMGB1P48-201ENST00000446155 ZNF548Q8NEK5 533 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P48-201ENST00000446155 GOT1L1Q8NHS2 421 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P48-201ENST00000446155 FAR1Q8WVX9 515 aa4.65□□□□□ -1.67
HMGB1P48-201ENST00000446155 INTS12Q96CB8 462 aaKnown RBP4.65□□□□□ -1.67
HMGB1P48-201ENST00000446155 TEFMQ96QE5 360 aaKnown RBP4.65□□□□□ -1.67
HMGB1P48-201ENST00000446155 NCAPGQ9BPX3 1015 aa4.65□□□□□ -1.67
HMGB1P48-201ENST00000446155 GPATCH1Q9BRR8 931 aaKnown RBP4.65□□□□□ -1.67
HMGB1P48-201ENST00000446155 APOL6Q9BWW8 343 aa4.65□□□□□ -1.67
HMGB1P48-201ENST00000446155 EPHX3Q9H6B9 360 aa4.65□□□□□ -1.67
HMGB1P48-201ENST00000446155 MAP6D1Q9H9H5 199 aa4.65□□□□□ -1.67
HMGB1P48-201ENST00000446155 DBNDD1Q9H9R9 158 aa4.65□□□□□ -1.67
HMGB1P48-201ENST00000446155 SLC35C2Q9NQQ7 365 aa4.65□□□□□ -1.67
HMGB1P48-201ENST00000446155 TAB2Q9NYJ8 693 aa4.65□□□□□ -1.67
HMGB1P48-201ENST00000446155 GRHL1Q9NZI5 618 aa4.65□□□□□ -1.67
HMGB1P48-201ENST00000446155 SUCLA2Q9P2R7 463 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P48-201ENST00000446155 ISY1Q9ULR0 285 aaKnown RBP4.65□□□□□ -1.67
HMGB1P48-201ENST00000446155 TARSL2A2RTX5 802 aaKnown RBP4.64□□□□□ -1.67
HMGB1P48-201ENST00000446155 PI4K2BG5E9Z4 385 aa4.64□□□□□ -1.67
HMGB1P48-201ENST00000446155 H0Y626 953 aa4.64□□□□□ -1.67
HMGB1P48-201ENST00000446155 PER2O15055 1255 aa4.64□□□□□ -1.67
HMGB1P48-201ENST00000446155 TBX10O75333 385 aa4.64□□□□□ -1.67
HMGB1P48-201ENST00000446155 TGDSO95455 350 aa4.64□□□□□ -1.67
HMGB1P48-201ENST00000446155 UNGP13051 313 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P48-201ENST00000446155 ATP6V1B1P15313 513 aa4.64□□□□□ -1.67
HMGB1P48-201ENST00000446155 MCM3P25205 808 aa4.64□□□□□ -1.67
HMGB1P48-201ENST00000446155 KLRC2P26717 231 aa4.64□□□□□ -1.67
HMGB1P48-201ENST00000446155 EEF1DP29692 281 aaKnown RBP4.64□□□□□ -1.67
HMGB1P48-201ENST00000446155 CLK1P49759 484 aaKnown RBP4.64□□□□□ -1.67
HMGB1P48-201ENST00000446155 HSD17B4P51659 736 aa4.64□□□□□ -1.67
HMGB1P48-201ENST00000446155 PRAMEP78395 509 aa4.64□□□□□ -1.67
HMGB1P48-201ENST00000446155 EFNB1P98172 346 aa4.64□□□□□ -1.67
HMGB1P48-201ENST00000446155 SLC18A3Q16572 532 aa4.64□□□□□ -1.67
HMGB1P48-201ENST00000446155 FBXO43Q4G163 708 aa4.64□□□□□ -1.67
HMGB1P48-201ENST00000446155 SYTL3Q4VX76 610 aa4.64□□□□□ -1.67
HMGB1P48-201ENST00000446155 ALG10Q5BKT4 473 aa4.64□□□□□ -1.67
HMGB1P48-201ENST00000446155 ALG10BQ5I7T1 473 aa4.64□□□□□ -1.67
HMGB1P48-201ENST00000446155 CHST9Q7L1S5 443 aa4.64□□□□□ -1.67
HMGB1P48-201ENST00000446155 IGFN1Q86VF2 1251 aa4.64□□□□□ -1.67
HMGB1P48-201ENST00000446155 WDR5BQ86VZ2 330 aa4.64□□□□□ -1.67
HMGB1P48-201ENST00000446155 MMP21Q8N119 569 aa4.64□□□□□ -1.67
HMGB1P48-201ENST00000446155 PLD5Q8N7P1 536 aa4.64□□□□□ -1.67
HMGB1P48-201ENST00000446155 ARL10Q8N8L6 244 aa4.64□□□□□ -1.67
HMGB1P48-201ENST00000446155 POMGNT2Q8NAT1 580 aa4.64□□□□□ -1.67
HMGB1P48-201ENST00000446155 GABPB2Q8TAK5 448 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P48-201ENST00000446155 RAB40AQ8WXH6 277 aa4.64□□□□□ -1.67
HMGB1P48-201ENST00000446155 CNOT9Q92600 299 aaKnown RBP4.64□□□□□ -1.67
HMGB1P48-201ENST00000446155 KLHL15Q96M94 604 aa4.64□□□□□ -1.67
HMGB1P48-201ENST00000446155 NAP1L5Q96NT1 182 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P48-201ENST00000446155 TEX12Q9BXU0 123 aa4.64□□□□□ -1.67
HMGB1P48-201ENST00000446155 SH2D4AQ9H788 454 aa4.64□□□□□ -1.67
HMGB1P48-201ENST00000446155 TTC12Q9H892 705 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P48-201ENST00000446155 XAB2Q9HCS7 855 aaKnown RBP4.64□□□□□ -1.67
HMGB1P48-201ENST00000446155 ELOVL5Q9NYP7 299 aa4.64□□□□□ -1.67
HMGB1P48-201ENST00000446155 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P48-201ENST00000446155 NLKQ9UBE8 527 aa4.64□□□□□ -1.67
HMGB1P48-201ENST00000446155 CDH22Q9UJ99 828 aa4.64□□□□□ -1.67
HMGB1P48-201ENST00000446155 RASAL2Q9UJF2 1139 aa4.64□□□□□ -1.67
HMGB1P48-201ENST00000446155 COG5Q9UP83 839 aa4.64□□□□□ -1.67
HMGB1P48-201ENST00000446155 HS3ST3B1Q9Y662 390 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms